Rana temporaria (common frog): 120941652
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Entry
120941652 CDS
T07929
Symbol
RBCK1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04217
Necroptosis
rtem04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120941652 (RBCK1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120941652 (RBCK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120941652 (RBCK1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120941652 (RBCK1)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120941652 (RBCK1)
Multi subunit type E3
LUBAC complex
120941652 (RBCK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
IBR
Zn_ribbon_RanBP
zf-C3HC4
ubiquitin
zf-RING_5
zf-RING_UBOX
zf-RING_2
IBR_1
Motif
Other DBs
NCBI-GeneID:
120941652
NCBI-ProteinID:
XP_040211116
LinkDB
All DBs
Position
5:416769102..416826467
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AA seq
675 aa
AA seq
DB search
MAGGGPSQPLPTVLVSVLAWREGAGDSREELQLQLSVEPENPGDFRLAVRNPARGPTLNT
IVGEFQLRDISYDLRTALCHQLTVLEDPTTCMAFNFDDEREAQKFWTVVSSSLREAQKAA
KSQTDLSGRKPPLPTKPRSPPNVGEPLSPEADPLSLMGNLGTKEELTARLSRCIESGDQK
LAAHYAAELAKYRASTQIQLKPTCYPKSEICMKVAVEDAKASVNITTYVYGHTTIAMLKQ
QIFKDYQFHPSIQRWIIGQCLCSDDRTVMSYGIRRDGDTAFLYLLGAKQAKLTPQDLYNS
SIYPGPSQLVASGLEDQRHSKTLPSRPNPKPVSNTFRPENMDTGGLPNLTRNAPPSPVQM
GWSCPACTYINVPTRPGCEICSSDRPTGYVVPEWYKPDETERRRLQQETDGLQQYKKAQE
EERHQNFLYLLQLDNEVLIPNQEAIECRICYTEVPAGGGVLLRECLHSFCKDCLRQVVNC
CEDPEVSCPFRDEMYACDSKLQQREIRALVSSEEYSRFLERGLVVAESRSQNSYHCRTAD
CKGWCIYEDSVNEFFCPICGAENCLTCKAIHDGMNCKEYQDDLRIRALNDTAARQTSDML
KTLVQTGEAMYCPACQIIVQKKDGCDWIRCTMCQTEICWVTKGPRWGPQGPGDTSGGCRC
NVNGRKCDPRCQNCH
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgggggcccctctcagcctctgcccacagtgctggtgtcggtcttggcctgg
cgggagggggcgggggactctcgggaggaacttcaattacaactcagtgtggagcccgag
aaccccggagacttccgcctggctgtccgcaacccggcccgcgggccgaccctcaacacg
attgtcggggagttccagctgagagacatctcgtatgatctgaggaccgcgctgtgtcac
cagctgaccgtcctggaggatcccactacctgcatggccttcaacttcgatgatgagcgg
gaggcccagaagttttggacggtggtgagcagctccctcagagaggcccagaaggccgca
aaaagtcagacggacttgtccggaaggaagccgccgttacccaccaaacccaggagcccc
ccgaatgttggagaacccctctcaccagaggccgatcccctttccctgatgggcaacctg
ggcactaaggaggagctgacggcgcggctgagccgatgcatagagagcggagaccagaag
ctggcggcgcactatgcggctgagttggccaagtacagagcttccactcagattcagcta
aaaccaacctgctacccgaaatccgagatctgcatgaaggtcgcagtggaagacgccaag
gcctctgtgaatatcaccacatatgtgtacggtcacactaccatagccatgctgaagcag
cagattttcaaggattatcagttccaccccagtattcagcgctggatcattggccaatgc
ctgtgctccgatgatcggacggtcatgtcttatggtattcggagagacggagacacggca
ttcctctacctgctgggggccaaacaggcgaagctgacaccccaagacttgtacaacagc
agcatctatccggggccgtcgcaattggtggcttcgggcctggaggatcaacgtcactcc
aaaaccctccccagccggcccaatccaaagccagtctccaataccttcaggccagagaac
atggatacagggggcctcccgaatctcacccgcaatgctccaccttcacctgtccagatg
ggctggtcatgccccgcctgcacgtatatcaacgtacctacccgccccggctgcgagatc
tgcagttcggaccgcccgacgggctacgtggttcccgaatggtacaaacccgacgagacg
gagcgacggaggttacagcaggagaccgacgggctgcagcagtacaagaaggctcaggag
gaggagcggcaccagaactttctgtacctcctccagctggacaacgaggttctcatcccc
aaccaggaagccatagaatgtcgcatctgctacaccgaggtccctgcggggggcggtgtc
ctgctacgcgagtgtctccacagcttctgcaaggattgtctgcggcaggttgtgaactgc
tgtgaggatccggaggtctcctgccccttccgggatgagatgtacgcctgcgacagcaag
ctgcagcagagagagatccgagcgttggtgtcatcggaagagtattcccgtttcctagag
cgtggcctggtagtggcggagagcagaagtcagaacagttaccactgccgcacagcagac
tgcaaggggtggtgcatctacgaggactccgtcaatgagtttttctgccccatctgtgga
gctgagaattgcctaacttgcaaggccatccacgacggaatgaactgcaaagagtaccag
gatgacctgcgtatccgagcgctgaatgacaccgccgccagacagaccagcgacatgcta
aagacgctcgtccagaccggggaagccatgtactgccccgcctgccagatcattgtccaa
aagaaagacggctgtgactggatccgctgcaccatgtgtcagactgagatctgctgggtg
accaagggccctcgctgggggccacagggtccgggagacacctcaggggggtgccggtgt
aacgtgaacggaaggaaatgtgacccacgttgtcagaattgccactga
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