Rana temporaria (common frog): 120941719
Help
Entry
120941719 CDS
T07929
Symbol
CSPG5
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtem00535
]
120941719 (CSPG5)
Proteoglycans [BR:
rtem00535
]
Cell surface proteoglycans
Others
120941719 (CSPG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
Motif
Other DBs
NCBI-GeneID:
120941719
NCBI-ProteinID:
XP_040211268
LinkDB
All DBs
Position
5:424277020..424381989
Genome browser
AA seq
707 aa
AA seq
DB search
MEGRSLAALLCWVVVLCTAGDPKNGSDVLGFDEHGDDSYKPPAAEILASLLEKGVLDVDK
ATIRRTASAGEDSNSWGGAKTKKPRIKPPKAAAPTGAAASSHGIASTESSVKPRSPRTNA
DNKPSVCAGCNDDVYANRKSPSRSLLSERSDGNDEPVTSLVWPVGQGTVDLEFRKSFAKG
DKPSAAESQEDSGSGDPHIKVPSSQATRASSSETGWNLRDLMDLATSAPSQTSTAWSDAV
LSPATEKAISPDSAEIDHLLQVPRETSVPSPSPSGTELGRDRHLHPSQKEVSFEAGKSQG
PFTILENDARRPAAQGAQGGTGVTVVTEKSQVDTLSTGAPTNRPPKPSEPPSDLTDIDYR
DPSDLDEHLGYPPGGDATKGFHDRLSPWHKHLHYDDFSPFDYLYPTPPFYADGYGEGGME
DDDEDEDLEDAEDDDDIAAKDVRNFPKAATPQIHTATIDERPTGRQDFPFRGETYPKSQP
DVNKDQTQTVSGAGENGTECRNGYVRRNNSCKSLCEIYPTYCYNGGQCYIVENIGAFCRC
NTQDYIWHKGLRCESIITDFQVMCVAVGTAALVVLLLFMMTVFFAKKLYLLKTENYKLRK
RNRYRTPSELHNDNFSLSTIAEGSHPNVRKLCDTPSNLSPHARALAYYDNVICQEDPNAP
QKVQDLPKACLKDEEPFNIQNSLSPKHECSKGDPDIVDVNCVLNNLT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaggagcctggctgcacttctctgctgggtggttgtcctgtgcacagctgga
gatcccaaaaacggaagcgatgtgttgggcttcgatgagcacggggacgactcctacaag
ccaccggcggcagagattctggcctctcttctcgaaaaaggagtgctagatgtggacaag
gcgacgatccggaggaccgcatccgccggagaagacagtaactcctggggtggagccaag
accaagaagccccggatcaagccacccaaggccgcggcgcctacaggagcggcggcctcg
tcccatggaatcgcgtccaccgaaagctccgtcaagccgcgctccccgcggacgaacgcg
gacaataagccatcggtttgcgcgggatgtaacgacgacgtttacgccaacagaaagtct
ccatcccgctctttgctctcggagcgcagcgacgggaacgacgaacccgtcaccagtctg
gtgtggcccgttggccaaggaacggttgacctggagttcaggaaaagttttgccaaagga
gataaaccttccgcggcggagagtcaagaagactctggaagtggcgaccctcacatcaag
gtgccctcaagccaagccacccgcgccagctcgtcggaaaccgggtggaacctacgggac
ttgatggatctggccacctccgcaccttctcagacctcgaccgcctggagcgacgccgtg
ctgagcccagctacggaaaaagccatcagccccgactcggcggaaatcgaccacctcctg
caagtgcccagagagacgtcggtgccgtccccgtcgccttcaggtactgaactcggccgc
gaccgccaccttcacccgtcccagaaagaggtcagttttgaggcagggaaatctcaggga
ccgttcaccatattggagaatgatgcgaggcggcccgcagcgcagggcgctcaagggggc
accggtgtaacggtggtcaccgaaaaaagccaagtagatactttatctactggcgcccca
actaaccgtccgccaaaaccctccgaacccccgtctgaccttacagacatagattatagg
gacccctccgatttagacgagcacttgggctaccctccaggtggtgacgccaccaagggc
ttccatgataggctcagcccctggcacaagcacttgcattacgatgacttttcccccttt
gattacctttaccccacccctcctttctacgcagatggatacggggagggggggatggag
gacgacgacgaagacgaggacctcgaggacgccgaggacgacgacgacatcgccgccaaa
gacgttcggaacttccccaaggcggccactccccagatacacaccgcgacaatcgacgag
aggccaaccggccgccaggacttcccctttcgcggcgagacgtaccccaagtctcagccg
gacgtcaacaaggaccaaacgcagaccgtgtcgggggcgggcgagaacgggaccgagtgc
cgcaacggctacgtcaggcgcaacaactcctgcaagtcgctgtgcgagatctaccccacc
tactgctacaacgggggtcagtgctacatcgtggagaacatcggagccttttgcaggtgt
aacactcaggattacatttggcacaagggtctccgctgcgagtccatcatcaccgacttc
caggtgatgtgcgtggcggtcggcacggcggcgctggtggtcctcctcctcttcatgatg
accgtcttcttcgccaagaaactctacctgctcaagacggagaactataaactgcgcaaa
aggaacaggtaccggactccgtcggagcttcacaatgataatttctctctgtccaccatt
gcggaaggctcccacccaaatgtaaggaaactttgcgacactccatctaacctctccccc
catgcccgtgcattggcttactatgataacgttatctgtcaggaggaccccaacgctcct
cagaaggtccaggatctgcccaaggcttgcttgaaggacgaagaaccctttaacattcag
aactctctctcgcccaagcacgagtgcagcaaaggggatccagacattgtggacgtcaac
tgtgtccttaacaacctgacatga
DBGET
integrated database retrieval system
