Rana temporaria (common frog): 120942900
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Entry
120942900 CDS
T07929
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04145
Phagosome
rtem04514
Cell adhesion molecules
rtem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120942900
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120942900
09142 Cell motility
04810 Regulation of actin cytoskeleton
120942900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120942900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120942900
04515 Cell adhesion molecules [BR:
rtem04515
]
120942900
04090 CD molecules [BR:
rtem04090
]
120942900
00536 Glycosaminoglycan binding proteins [BR:
rtem00536
]
120942900
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
120942900
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120942900
Cell adhesion molecules [BR:
rtem04515
]
Integrins
Integrin alpha subunits
120942900
CD molecules [BR:
rtem04090
]
Proteins
120942900
Glycosaminoglycan binding proteins [BR:
rtem00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120942900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ITGAX-like_Ig_3
VWA
Integrin_A_Ig_2
VWA_2
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_alpha
vWA_SIBA-E
Leukocidin
Motif
Other DBs
NCBI-GeneID:
120942900
NCBI-ProteinID:
XP_040211787
LinkDB
All DBs
Position
6:complement(1130479..1169737)
Genome browser
AA seq
1145 aa
AA seq
DB search
MGGLLTWLLLHQALSSASAFFVDTTRPIIFQNVDPSFGHQVVQMDKWVIVSAPLHRESQN
KTGRLYRCDPQTASCNPMPIPGSSDDDINSSLGLSLVVQENPPQLLVCGPTLQRPCGGNI
YVNGRCYYITGEPPVMTALPRSLPECSGPALDIVFLIDGSGSIVAKDFTLMLNFITRVME
EFKESNTQFALMQYSERFRIHFDFTQYSQIKDPAKLTKPITQRRGGTHTSSAILAVMQNL
FMPGRGVRENAEKVLIVITDGESIRDPAPYSMSIGEADRLKVRRFVIGVGDAFSVPSAQQ
ELETIASPKAEDHLLQVDDFSILQNFQRTLQDKIFAIEGTQSANVSSFQLEMSQEGFSAV
LTSRGPVLGAVGAYDWSGGISLYLDGQQNGTWINATKDRKDMKDSYMGYAVQQLQWDTFA
IGAPRYQHLGSVFIYMNNPTTSEWSQVAAFTADKIGSYFGSVLSVLTLNSTHSLLVVGAP
TYYSPEAPGGRVYLCPVTEVRNFWHPKGASVTMTCPETLHGDPSQSVGHFGSAISILPDM
TGDQLSDLAVGAPCEDNYQGAIYIFPGQGESFRTSYIQRISGRQVSGGIKYFGRSLSGNL
DMTKDNLPDLVVGAEGRVLIARSRPVLGVSVSMTFDPIEIPLSFYECSDKRKVGSAIKLN
ICFFSYQKNNKAKVEDFGRVTYSLLLDAGRTNTRALFTSAGRSLNATKGLLSGQVCADHS
IQIPECVEDSLSALRVSLNFSLVGTPVLSEDSLSSQSAEIPFQKNCGGDGVCEDNLSLKI
AFTGVSQVVVGVTLDVNVTVTVKNEGEDSYNTRVLIPFPSGLSYRMVSLVETGNRKVTVS
CASLEAQRVVNCGVNRPILKPNTTAVFLVGFHVSPTAALGKTLILAANVNSDYRRAPTDR
MMSSSQLGVRYAIYVTITSLEESSKFQNFSKSDSTIQHIYRVRNLGQRSLPLTVIFMVPV
RVGETSIWQSWNITSSEPDLSTCTEAREAPGVENYQEILARTPILNCSVGWCVRVECEIQ
DLKVQSSLNFTISGSVTKESVTQTGQQKISLQTSAEIRYDSQTYAHILEQNQRFVRTQTQ
TTLEINVEYNYFPIIIGSSVGGLVLLALIAAGLYKLGFFKRQYKNLLENPDVPGAEGTEQ
APLDE
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgggggggctcctgacctggttgctgctccaccaagcgctctcctccgccagcgccttc
tttgtggacacaacgcgtccaatcatcttccagaatgtggatcccagctttggccatcag
gtggtgcagatggataaatgggtgatagtcagcgctccgctccaccgagaatcccagaat
aagacaggacggttatatcgctgcgacccgcagacagccagctgcaaccccatgcccatc
cccggttcctctgatgacgatataaattcctctctcggattatctctggttgtacaggag
aatccgcctcagcttctggtgtgtggcccaaccctgcagaggccatgcggtgggaacatc
tatgtaaatggacgatgctattatataactggagagccaccagtgatgacagctctaccc
cgatccctgccagagtgcagtgggccggcattggacatcgtcttcctcatcgatggatcg
gggagtattgtcgccaaggatttcacattaatgctgaactttatcaccagagtgatggaa
gagttcaaggagagcaatacacagtttgccctcatgcagtattctgagagattccggatt
cattttgattttacccagtattcgcaaataaaagatccggcaaagctgaccaagcccatc
acccagcggagaggggggacgcatacttcttcagccatcctagcggtgatgcagaacctc
tttatgccagggagaggcgtccgagaaaacgctgaaaaggttctcatcgtcataacagat
ggggaaagcatccgcgatcccgcgccgtactctatgtccatcggagaagctgacagactc
aaagtccgccgcttcgtcatcggggtaggagatgctttctctgtccccagtgcccaacag
gagctggagactatcgcctccccgaaggccgaggatcacctcctccaggtcgatgacttc
tccatccttcaaaatttccagaggacgctgcaggacaaaatcttcgccatcgaaggtaca
cagtctgcaaatgtaagttctttccaacttgagatgtctcaggaggggttcagcgcagtt
ctgacatcgagagggcccgtccttggggcagtaggtgcttatgattggtctggagggata
tccttgtacttggacggtcagcagaatggcacctggataaacgctacgaaggatcgtaaa
gacatgaaggattcttacatgggttacgcagtccagcagctgcagtgggacacgtttgcc
attggcgcaccaagataccaacatctgggcagtgtcttcatctacatgaataacccaaca
acatcggagtggagccaggtggctgcattcactgcagacaagattgggtcgtacttcggg
tcggtgctgagcgttctcactttgaattccacacactcgcttcttgtggtcggggcccca
acgtattactctccagaagctccaggtggacgggtgtacctgtgtcctgtcaccgaggtc
aggaacttttggcaccccaaaggagcatctgtcactatgacatgtccagagacccttcac
ggtgaccccagccaatctgtaggtcattttggttctgccatctccattctaccagacatg
actggagaccagctatcagacctggcagttggtgccccgtgcgaggacaactatcagggg
gccatctacatcttcccaggtcagggtgagagcttcagaacttcatatatacagcgcatt
tctggtcggcaggtcagtgggggcatcaagtattttgggagatcattgagtggaaatctg
gacatgacgaaggacaatcttcctgatcttgtggtgggagctgaaggacgagtcctgata
gcgaggtctcgaccagttctgggtgtctcagttagcatgaccttcgatcccattgagata
cccctttcgttctacgagtgctcagataagcgcaaagtggggagtgcgataaagctcaac
atctgcttcttcagctaccagaaaaacaacaaggcaaaagtggaggactttggtcgggtg
acatactctctcctcctggacgctggtcgcaccaacacccgggccctcttcaccagtgct
gggcgctccctcaatgccaccaaaggtcttctgtcagggcaagtgtgtgcggaccattcc
atccagattcctgagtgtgtggaagactctctgtccgctctccgagtctcactcaatttc
tccctcgttggaacgcctgtgctgagtgaggactctttatccagccagtctgcggagatc
ccatttcagaagaactgtggtggcgacggagtgtgtgaggacaatctgagcctgaagatc
gccttcacaggtgtcagccaggtggtggtcggagtgactcttgatgtcaacgtgaccgtc
acagtgaagaacgaaggtgaagattcatacaacactcgtgttctcatccctttcccctcc
ggtctgtcgtatcgcatggtgtctctcgttgagacgggaaacaggaaagtgacggtttca
tgcgcctctctggaggctcagagagtggtgaactgcggggtgaacagacctattctgaaa
ccaaacactacggcagtcttcctggtgggttttcacgtttcaccgacagctgccctgggg
aaaactctgatattggcagccaacgtgaatagtgattacagacgagctcccaccgatcga
atgatgtcctcatctcagctgggtgtccgttacgccatctatgttaccatcaccagcctt
gaagagtccagcaaatttcagaacttctccaaaagtgactccaccatacagcacatctac
agggtccgtaatctgggccaacggtcacttcctctcaccgtcatcttcatggttccagtg
agggtgggggagacgtccatctggcagagttggaacattaccagttctgagccagacctc
tccacctgtactgaagccagagaagcccccggagtggagaactaccaggagatcctggca
agaaccccaattctgaactgttctgttggttggtgtgtcagagtggagtgtgagattcag
gatctgaaggttcagagctccctaaactttactatcagcggatctgtgaccaaagaatct
gtcactcagacaggacagcagaagatttccctgcagacctcggcggagatcagatacgac
tctcagacctacgcgcacatcctggaacagaaccagcgttttgtcagaactcagacgcag
acgaccctggagatcaatgtggagtacaactatttccccatcatcattggcagcagtgtg
ggggggctggtgctcctggcactcatagcggctggtctctataagctcggcttcttcaag
cgtcagtacaagaaccttctggagaaccccgatgtgccaggcgcggagggcacagaacag
gctcccctggatgaatga
DBGET
integrated database retrieval system
