Rana temporaria (common frog): 120942960
Help
Entry
120942960 CDS
T07929
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120942960
04121 Ubiquitin system [BR:
rtem04121
]
120942960
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120942960
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120942960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
zf-C2H2_12
hAT-like_RNase-H
DBD_Tnp_Hermes
zf-Di19
Motif
Other DBs
NCBI-GeneID:
120942960
NCBI-ProteinID:
XP_040211890
LinkDB
All DBs
Position
6:6547613..6552508
Genome browser
AA seq
645 aa
AA seq
DB search
MAEVEQKEREIKNAPSFLKANIWEHFGFYEKSGKHELDKSYAVCKICHTKIKYLGNTTNL
RNHVSRFHPEMLKPTTTTTKEMNPDQPKIDAMLQSTLPPNSEKVKRITKAVAAFIAKDLR
PYSVVENSGFRYLLKTIEPRYKIPSRSHFTENVIPALYHETKAKIIASMSQASRVAITCD
SWTSVTTESYVTITAHYVSKDWQILSHVLQTRAIYESHTGAHLAELLSHVVEEWQLSDKS
VVLVTDNASNMIVAAQVGKFPHVKCFAHTLNLASQRALKVATLSRLLGRVRRISTFFHRS
TRASHCLKEKQKCLGLKNHKLITDVATRWNSAYDMVERFLEQQPAVCATLLSPEVRRGES
DLCTLNETDVSNAEDAVSALKPMKDATMLMSEERNPTVSLIAPINAQLLQSMTDTMGDTP
MIHEIKNSIRTDLQKRYSSEAEKKILHTASALDPRFKGLPFILTDEERLEIFKGVTEEAA
SLEITSDESERTQEDHQVPRRKRTLEEEDSSPIEDNHSPSPPSPPKKARSLLVSLLGQSF
TDTEGTIEPKKTPYAKAEEEMENYCKAPPLPLTEDPLNWWREHEVIFPLLSRLSKQYLCI
PGTSVSAERVFSTAGDVVTAKRSALKPDHVDQLVFLQKNLHVPKC
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtagaacaaaaggaacgagagataaaaaatgcacctagctttttaaaagca
aacatctgggaacattttggcttttatgaaaaaagtgggaagcacgaattggacaagtca
tacgctgtgtgtaaaatctgtcacacaaaaattaaatatctagggaatactactaatctg
agaaaccacgtcagccgttttcacccagaaatgctaaaacctaccaccaccaccaccaag
gaaatgaacccagatcagccaaaaattgatgcaatgttacagtcaactttgccgcccaac
tctgaaaaggtaaagagaataacaaaagctgtggcagctttcatagcgaaggacctgcgc
ccttactctgttgtggaaaacagtgggtttcgctaccttttgaagacgatagagccgcgt
tacaagatcccgtcacgaagtcactttacagaaaacgtcatacctgcactctaccacgaa
accaaagctaagataattgcatcaatgagccaagcaagtcgagtcgcaataacgtgtgat
tcctggacttcagtcacgacagagtcttatgttacaataacagcacattatgttagtaag
gactggcagattttgtcgcatgtactgcaaacgagagccatttatgagtctcacacgggt
gctcatctggcagagctactttctcatgttgtggaagaatggcagctgtccgataaatct
gtagtgcttgtgaccgacaacgcgtcaaacatgatagttgcagctcaagttggaaaattc
ccccatgtgaaatgcttcgcccatacactgaatcttgcatcccagcgagcgttgaaagtg
gccactctctctaggcttcttggcagagtacgtcggatatccacattctttcaccgcagc
actagagcaagccactgtctaaaagagaaacagaaatgtcttggcttgaagaatcataag
ctgataactgatgtggcaacaagatggaacagtgcatacgacatggtcgagaggttcttg
gaacaacaacctgcagtctgtgccaccttgctgtctccagaagtcagaagaggagagtcc
gatctctgcactctaaacgaaacagatgtgtcaaatgcagaggacgccgtgagtgcatta
aagccaatgaaggatgcaaccatgctgatgtcagaagagcgcaatccaacagtttctctc
attgcccctataaatgcacaacttctccagagcatgacagacacgatgggagacacaccc
atgatccatgagatcaagaattctattagaacagatctccagaagaggtacagcagtgag
gccgagaagaagatccttcatacagcctctgcactggatcctcgctttaagggactgcct
ttcatcctcacagatgaagaaagattggagatatttaaaggagtcactgaggaagctgca
tccttggagattacatcagatgagagtgagaggacacaagaggatcatcaagtgcctaga
agaaaacgaactctggaagaagaggacagttcacccatcgaagacaaccattctccatct
ccaccatctcctcccaaaaaggccagatcgctgctcgtgagtttgctgggacagtctttc
actgacactgaaggtacaatagaacccaaaaagaccccctatgccaaggctgaagaggaa
atggaaaactattgtaaagccccacctctgcctctcactgaggaccctttgaactggtgg
cgtgagcatgaggtcatatttcccctcctttctcggctgtcaaagcaatacttgtgtatc
ccaggtacaagcgtgtctgcagagcgggttttctccactgcaggagatgtggtaactgca
aaaagaagcgccctcaaaccagaccatgtagatcaattggtgttcttacagaaaaatcta
catgttcccaaatgctga
DBGET
integrated database retrieval system
