Rana temporaria (common frog): 120943185
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Entry
120943185 CDS
T07929
Symbol
SREBF1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120943185 (SREBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120943185 (SREBF1)
04131 Membrane trafficking [BR:
rtem04131
]
120943185 (SREBF1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
120943185 (SREBF1)
Membrane trafficking [BR:
rtem04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120943185 (SREBF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
120943185 (SREBF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
ZapB
VPA1267
Motif
Other DBs
NCBI-GeneID:
120943185
NCBI-ProteinID:
XP_040212274
LinkDB
All DBs
Position
6:16718819..16778230
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AA seq
1189 aa
AA seq
DB search
MNGLAFDDSSLDQLDPSLCLHESSDIDNALLSDIDDMLQLINNNENDFGFFDASFGAVNT
QAQEPAAKVDLAVDLAGGTALSSLEGLLAAPTASTPMKMFPLSTPGFHSPPAATLPQDNR
MHQLKLGLQSMAKDEPMQISPTQQHVQTKLQAPPTTQHLQGMLFGQSLVTASQPRFNNQP
VPGYQEQSAEPATQVVSTPHSTASQPLQSITGQPLQSIASQPVQNVASQPLQSIANQPLQ
SVASQAPIVQSVAAQPLQTHPSPQIQQSLTFHAHSIPSQQFLTTTSGGTSITQQIQQVPV
LLQPHFIKADSLVLTAVKTDSAMMSGIKTSPTTTTIQTTPLQMPTLMSGGAILTTVPFMM
DPDKLPINRLNANGKMAMLNGKGEKRTAHNAIEKRYRSSINDKILEMKDLVMGTEAKLNK
SAILKKAIDYIRYLQQSNVKLKQENIMLKMAAQKNSTLKDIVAGTGVNMDSVKAEMMDVL
TPPPSDVGSPLHTGSPLSQCNSDSEPDSPFTDEAKVQVKQELPSPPGTGMLDRSRMALCV
FVFLCLSFNPLSFLMGGSRNQEAPDVAGFHGSGRSMLELPSPEGSSWFSWFTPSVLLWPV
NLMIVLCVFIRLFIYGEPVTRLHSESSVQFWCHRKQADVDLSRGDFAQASLHLWKALKAL
GRPLPTSNFDLCCSLTWSVIRYVLQRLWVGRWLAGRAGGFRRDHQLKDDVRKSCREAALV
YHRLHQLHMTGKHAGGHLSAINMALSAVNLADCAGNTISVATLAEIYVGAALRVKASLHR
RFHFLARFFLCSARQVCLAQSVTIPPAMQWLCHPLGHRFFVDGDWSVRSSPRDTIYSTAG
STVDPLAQVTQAFREHLLEKALYCVAQPEQEKPMADGEGEFSDALEYLQLLKGCSDNAAV
PNHIFSISSSMTAVTGTDPVAKWWASIIIVAINWLQGDDEAAQGLYPVVEYMPKSLHATE
NSLPKAALYAFKAVRMLLGKQDSTQVSLSQCEKASGYLRDSLNSSPSSNANVDKAVQLLM
CDLLLVTRTNIWQQQQQNSTGQQPSLIHPACPQELRGFQLDLSSLRRLAQSFRPAMRRVF
LHEATARLMAGASPTRTHQLLDRSLRRRVPLSSKEAGTREAAPTTREHAEALLLACRYLP
PSFLSAPGQRVGMLAEAARTLEKLGDKRTLQDCQQFILTLGSSTAVTSS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtttggcgttcgatgacagctccttggaccagctggacccgtccctgtgcctc
catgagagcagcgacatcgacaatgccctgctgagcgacatcgatgatatgctccagctc
atcaataacaatgaaaacgattttgggttcttcgatgcatcgtttggcgcagtcaatacc
caggcccaggagcccgctgctaaagtggacctcgcagtggacctggcaggagggaccgcc
ctcagctccctggaagggttactggccgcacctaccgcctccacccccatgaagatgttc
ccgctgtccactccaggtttccacagcccaccggctgccaccctgcctcaggacaatcgc
atgcaccagctgaagctcggtttacagagcatggcgaaggatgagcccatgcaaatctcc
cccacccaacagcatgtccagaccaagctacaggcccctcccacaacccagcatctgcag
ggcatgctattcgggcagagcttggttacagcttcgcagcctcggtttaacaaccagcct
gtgcctggataccaagagcagagcgctgagccagctacacaagtggtctccacccctcac
agcacagcaagtcaacctttgcagagcatcacaggtcagcctctgcagagcattgcaagt
cagcctgtacagaacgtggccagccagccgctgcagagcattgccaatcaacctctgcag
agcgtcgcatcacaagctccgatcgtgcagagcgtggccgcccagcctctgcagacgcac
ccttctccacagatccagcagtctctgaccttccacgcacacagcatcccttctcagcag
ttcctgaccaccaccagcggcggcacttccataacccagcaaatccagcaggtgccggtt
ctgctccagcctcattttatcaaggcggactctctggtccttacagcggtgaagacggac
tcggcaatgatgtcaggcatcaaaacatcgccaaccaccacaaccatccagactacgcct
ctgcagatgccgaccttgatgagtggcggggccatattaaccacagtgccgttcatgatg
gatcccgataagctgcctatcaaccgtctaaatgccaatggaaagatggctatgttgaac
ggcaagggagaaaaacgtactgcgcacaacgccatcgagaagcgttatcgatcctccatc
aacgacaagatccttgagatgaaggaccttgtgatgggaactgaggccaagctgaacaag
tcagccattttgaaaaaggccattgactatattcgatatctgcagcagagtaacgtcaaa
ctaaaacaagagaacatcatgctcaaaatggctgcccagaaaaacagcacattgaaagac
attgtggcgggtacaggggttaatatggacagcgtgaaagccgagatgatggatgtccta
acgccacccccttcggacgtgggatccccattgcatactggcagtccactatcccagtgt
aatagtgactccgagccagacagccccttcactgatgaagccaaggtgcaagtcaagcag
gaactcccatctcctcctggtacggggatgttggaccgctctcgcatggcgctctgtgtc
tttgtcttcctctgtctctctttcaatcctctgtcatttctgatgggtggttccaggaac
caagaggccccggatgttgctgggtttcatggtagtgggcgaagcatgctggaactacct
tcccctgagggctcttcatggttcagctggtttactccatctgttctcctttggcctgta
aacctgatgattgtcctgtgtgtcttcattcgcctctttatttatggtgagccggtcaca
cggctacattccgagtcctcggtccagttctggtgtcaccgaaaacaagccgatgttgat
ttatctcggggggactttgcccaggcctcgcttcacctttggaaagccctgaaagctctg
gggcgacctctccctacatctaacttcgacctttgctgcagcctaacgtggagcgtcata
cgctacgtccttcagcggctgtgggtgggccgctggttagcggggagagccggaggattc
cgcagggaccaccagctgaaggacgatgtgaggaagagctgcagagaggctgccctggtg
taccaccgcctgcaccaactgcacatgacggggaaacatgcagggggtcatctgtctgcc
atcaacatggcgctgagtgctgtcaacctggcagactgcgcgggtaacaccatctcggta
gccacactggcggagatctacgtgggagcagcattgcgtgtcaaagccagcctgcatcga
cgcttccatttcctggcgcgcttcttcctatgcagcgcccgccaggtgtgcctggcacag
agcgtcaccattcctcccgccatgcagtggctgtgccatcctctgggccatcgcttcttt
gtagacggggactggagtgtgcggagctccccccgggataccatctacagtacagctggc
agtacagtggaccctctggctcaggtgactcaggctttccgtgaacatctcctggaaaag
gctttgtattgtgtggcgcagccggaacaggaaaaacccatggctgatggcgagggggag
ttctccgatgctctggagtatttacagctactgaaagggtgctcagacaacgccgctgtg
cccaaccacatcttttctatcagctccagcatgaccgccgtcacaggaaccgaccccgtg
gccaagtggtgggcctccatcataatcgtggctatcaactggcttcagggagatgatgaa
gcagcgcagggtctctatccagtggtagaatacatgccgaaatctcttcacgccacagaa
aactctctacctaaagctgccctgtatgccttcaaagcagtaaggatgctcctggggaag
caggacagcactcaggtcagcctgagccaatgcgagaaggccagcggatacctgcgagac
agcctgaactccagtccttccagtaacgccaatgtagacaaggcggtgcagctcctaatg
tgtgaccttctcctggtgaccaggacgaacatctggcagcagcaacagcagaactcgacg
gggcaacagccgagtcttatccaccctgcgtgcccccaggagctcaggggcttccagctg
gatctgagcagcctgcgccgactggcacaatccttccgacccgccatgcgcagggtcttt
ctacacgaagccacagctcgactcatggcgggggccagtccaacgcgaacgcatcagttg
ctggaccggagtctgcgcagaagggtacctctgtctagtaaagaagcaggcacccgagaa
gctgcgccgaccacgcgggagcacgccgaagccctcctcctggcgtgccgctacctgcct
ccatcatttctgtctgccccagggcagagggtgggcatgctggccgaagctgcccggact
ctagagaagctcggcgacaaacgcaccctgcaggactgtcagcagttcatcctgactctg
ggcagcagcacggctgtgacctccagctag
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integrated database retrieval system
