Rana temporaria (common frog): 120943206
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Entry
120943206 CDS
T07929
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120943206 (TMC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtem02000
]
120943206 (TMC1)
03037 Cilium and associated proteins [BR:
rtem03037
]
120943206 (TMC1)
Transporters [BR:
rtem02000
]
Other transporters
Pores ion channels [TC:
1
]
120943206 (TMC1)
Cilium and associated proteins [BR:
rtem03037
]
Other cilia and associated proteins
Stereociliary proteins
120943206 (TMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
DUF5471
Seadorna_VP11
PCP52
Motif
Other DBs
NCBI-GeneID:
120943206
NCBI-ProteinID:
XP_040212317
LinkDB
All DBs
Position
1:complement(284136367..284232103)
Genome browser
AA seq
793 aa
AA seq
DB search
MKPWLAETDDEGANVPDEENEEDGEGSPAGKRGKRGRKGPGAANRKAKDNTKKKDKKKKD
GDDGSDEDEDDITEEELDKLKEAVEEKKKLIATIRNKPWKMKQKLEVLKDAQQFVEKFEG
ALGKGKGKKFYAYKVMMLKKWMKFQRDFENFRTACIPWEMKIKEIESHFGSSVASYFIFL
RWMYGINMILFGLTFGLVMVPEALMGKPHGSISRKTVPRAEQPSAMNFATLYDFSGFAQY
SVLFYGYYNSQRTIGWLQFRLPLSYLLVGIGTIAYSFMVVIRTMAKNANDDGGGDDNSFN
FSWKMYTSWDFLIGNPETADNKFASITTSFKESILEEQENRKEENIHLVRFLRVLANFLV
MCTLAGSGYLIYFVVRRSQQFALEGYENYGWWERNEVNTVMSLLGMFCPTMFDVVSGLEN
YHPRIALRWQLGRIFALFLGNLYTFLIALMDEINLKRQEEKVVQHNMTMWYANLFNASYS
ENSTGGPFVVDPSDVPRGPCWETMVGQEFVRLTVNDIMTTYVTILTGDFLQAVFVRFFNY
CWCWDLEYGWPSYCEFDISGNVLGLIFNQGMIWMGSFYAPCLPAINVFRLHTSMYLQCWA
VMCCNVPHARVFKASRSNNFYMAMLLFILFLAMLPVIYTIVSIPPSFDCGPFSGKQRMYE
VIQETLDNDFPAWFAKVFGYASNPGLILPFILLMVMSIYYLNATSKGYQAAILELKKKLQ
SQAEENKKRSKKAAEKAAEIAAEAQEASKDNSPGRGHNKNEHPGAGHKGKNLEVPPRIAV
TKPPKTKGPPKPS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccttggttggcagaaactgatgatgaaggtgcaaatgtccccgatgaagaaaat
gaagaagatggagaaggctctccagctggcaagagggggaaaagaggaaggaagggacct
ggagcagccaacagaaaagcaaaggataatactaaaaagaaagacaagaagaaaaaggat
ggtgacgatgggtctgacgaagatgaagacgatatcacagaggaggagctagataaatta
aaagaagcggtagaggaaaaaaagaaactaattgcaactataagaaacaagccttggaaa
atgaagcaaaagttggaagtgttaaaggatgctcagcagtttgtggagaagtttgaagga
gcactcggaaagggaaaaggcaaaaagttttatgcatataaagtcatgatgctcaaaaaa
tggatgaaattccagcgagattttgaaaatttcagaactgcctgtataccatgggaaatg
aaaattaaagagattgaaagtcactttggctcttctgttgcttcttattttatatttctt
cgttggatgtatggaattaatatgatactttttggattgacatttggcctagtcatggta
ccagaggcattgatgggcaaaccacatggttcaatttcacggaaaacggttccaagggcc
gagcaaccctcagctatgaattttgccacattatatgattttagcggttttgcacagtac
tctgttctcttctatggatactacaacagtcaaagaaccattggatggctgcagtttagg
ctcccactttcttacttgctagttgggatcggtaccattgcatacagctttatggttgta
ataagaacgatggccaagaatgctaatgatgatggaggaggggatgacaacagctttaat
tttagctggaaaatgtatacaagctgggattttttgattggaaacccagaaacagctgat
aacaaatttgcatctataacaacaagctttaaagaatccattttagaagaacaagaaaac
agaaaagaggaaaatattcatttagtccgctttcttcgagttcttgccaacttccttgta
atgtgcacgcttgcaggcagtgggtatctaatttattttgttgttcgaagatcccagcag
tttgctctggaaggctatgaaaactatggatggtgggaaaggaatgaggttaatacagtc
atgtctctgcttgggatgttttgtccaacaatgtttgatgtggtcagtggattggaaaac
tatcacccacgtatagcattaagatggcaactgggacgaatatttgctttatttctgggc
aacctgtacaccttcctgattgctctaatggatgaaataaatctaaagcgtcaagaagaa
aaggttgtgcagcataacatgacaatgtggtatgcaaatctgtttaatgcatcgtattca
gaaaattcaacaggtggtccttttgttgttgatccatcagatgttcctcgaggaccatgt
tgggagacaatggtgggacaggaatttgttcgtcttacggtgaatgatatcatgaccaca
tacgttactattcttactggtgacttcttacaagcagtttttgtacgtttttttaactac
tgttggtgctgggatctggaatatggatggccttcttattgtgaatttgatataagtgga
aatgtgttgggattaattttcaaccaggggatgatctggatgggatcattttatgctcca
tgcctccctgctatcaatgtattccgtctccatacatctatgtacctacaatgttgggcc
gtaatgtgctgcaatgttccccatgcaagagtctttaaagcctccagatccaacaacttc
tacatggccatgctgctctttattctctttctggctatgttgccagtcatctacaccatt
gtctcgatcccaccatcatttgactgtggtccattcagtgggaagcaaagaatgtatgaa
gttatacaggagaccttggacaatgacttccctgcatggtttgccaaagtattcggctat
gcctcaaaccctggacttattctacctttcatcctactcatggttatgagcatctactat
ctaaatgcaacttcaaagggataccaagctgcaattttggaactcaagaaaaaactgcag
agccaagctgaagagaataaaaagcgcagtaaaaaagcagcagaaaaagcagcagaaata
gcagcagaagctcaagaagccagtaaagacaattcccctgggagagggcacaataagaat
gaacatccaggagctggtcataaagggaaaaatctggaagttcctcctcgtattgctgtg
actaaaccaccaaaaactaaaggaccacctaagccttcataa
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