Rana temporaria (common frog): 120943227
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Entry
120943227 CDS
T07929
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03440
Homologous recombination
rtem03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120943227 (TOP3A)
03460 Fanconi anemia pathway
120943227 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtem03032
]
120943227 (TOP3A)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120943227 (TOP3A)
Enzymes [BR:
rtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
120943227 (TOP3A)
DNA replication proteins [BR:
rtem03032
]
Eukaryotic type
DNA Topoisomerases
120943227 (TOP3A)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
120943227 (TOP3A)
FA (Fanconi anemia) pathway
120943227 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
120943227
NCBI-ProteinID:
XP_040212350
LinkDB
All DBs
Position
6:complement(20158101..20195718)
Genome browser
AA seq
1020 aa
AA seq
DB search
MIFCRSILTFSRFKIRTRTSIRFCSEKSSIMSLRIPVQKVLCVAEKNDAAKGISDIMSNG
RMRRREGFSKYNKIYEYEYHLFGKDVTVIMTSVSGHLLGMDFQRHLKSWHSCNPVSLFDA
EVEKFCPDDMVNIKRTLEREVRACQVLVIWTDCDREGENIGFEVIDVCKAVKPNLQVFRA
RFSEITPRSISTACQNFIPPDQNTTDAVDVRMELDLRIGAAFTRFQTLRLQKIFPSVLSN
QLISYGSCQFPTLGFVVERFKAIQAFIPEAFYKIRVTHEHEDGNVEFSWKRHRLFNHTAC
LVLYQICMEDPTATVVQVGSKPKSKWRPVALDTVEMEKLVSRKMKIGAKETMKIAEKLYT
QGYISYPRTETNIFPKDLNLTPLVEQQTQDPQWGGFAQRILERGGPTPRNGNKSDQAHPP
IHPTKYASNLQGNEQRIYEFIVRHFLACCSQDAQGQETTVEIDIAAERFVAHGLMIIARN
YLDVYPYDKWNTKVIPVYEMGERFQPTLVEMVDGETSPPQLLTEADLISLMEKHGIGTDA
THADHIETIKSRMYVGLTPEQRFLPGELGMGLVEGYDSMGFEMSKPDLRAELEADLKLVC
EGKKDKFTVLRQQVQNYKQVFIEAAAKATKLDEALSQYFGQAAQPVEQQEIYPETPLPIR
KCPQCNRDMVLKTKKDGGFYISCLGYPSCKTSIWLPNFVLEVSRDDSVCDVCRPHPIHKL
KLKFKRGSVPPIMPLEFVGCIGGCDETLREILDLKYLQGGSRAPQPGLPRESNRAQVNQR
NNRITNDRDRGGPNRQPPAKKERKPQLVTPAIQRNAPPTSANPENNEVVCNCGVTAVQLT
VRKEGPNQGRPFYKCDGGKCNFFLWADQENGDSRSPPALQVSAGRPSTSFNSSRAPEGSR
MAGGSGDSGLGGETKCMCNQPAITRTVQKDGANKGRPFHTCSKPREQQCGFFQWADENIP
PGPSGDFPTTFGGGSGAQRGFGQKNKRTDNAEKAPTAKRPRTCGICHQPGHNRTNCPQNR
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgattttctgtagaagtattttgacattcagcaggtttaagatcaggactcgaaccagc
atccgtttctgctctgaaaagtcctctatcatgtccctgaggattcctgtccagaaagtc
ctgtgtgtggcggagaaaaatgacgctgccaaggggatttctgatatcatgtccaatggg
aggatgaggaggagagaaggattttcgaagtataacaagatctatgaatatgagtatcat
ttgtttggaaaggatgtgacggtcatcatgacctcggtctctggacacttgttggggatg
gattttcagagacatctcaaatcctggcacagctgcaacccagtgtctctttttgatgct
gaagttgagaagttctgccctgatgatatggttaacatcaagagaacgctggagcgagag
gtgcgggcgtgtcaagttctcgtcatatggacggattgcgatcgagaaggagagaacatc
ggttttgaagttattgatgtctgcaaagcagtaaaacccaatttgcaagtgttccgtgcc
cgcttctccgaaatcacgcctcgttccatcagcacagcttgtcagaacttcattccgcct
gatcagaacaccactgatgccgtagatgtgaggatggagctggaccttcggataggtgct
gctttcaccaggttccagactctccgcctgcagaagatctttccctctgtgttgtctaat
cagctcatcagctatggaagctgtcagttccccaccttgggctttgtggtggagaggttc
aaagccatccaggcctttattccggaggccttctacaagatcagagtgactcatgaacat
gaagatgggaacgtggagttcagctggaagaggcaccgtttgttcaaccacacagcatgc
cttgtcctttaccagatctgcatggaggatcccacagctacggttgttcaagtgggaagc
aaaccaaagagcaaatggaggccagtggccctggacacggtggagatggaaaaactggtt
tctagaaaaatgaaaattggcgcaaaggagaccatgaaaattgcagagaagctttatacg
cagggttatatcagttaccctcgaacagaaaccaacatttttcccaaggacttaaacctc
acgccattggttgagcagcagacacaggaccctcagtggggtggctttgcacaacgaatc
ttggagaggggtgggccaactcccaggaacgggaacaaatcagatcaggcccatcccccc
atccaccctactaagtacgccagcaacctgcagggaaacgagcagcggatctatgagttc
attgtgcgtcatttcttggcctgctgctcccaggatgctcaggggcaggagaccaccgtg
gagatcgacatcgctgccgagaggtttgtggctcacgggctgatgattatcgccagaaat
tacctggatgtctatccgtacgacaagtggaacacaaaggtcatccctgtgtatgagatg
ggcgagaggttccagcccacattggtggagatggtggatggtgagacctccccgccacag
ctgcttacagaagccgatctcatatccttaatggagaaacacggaatagggactgacgct
actcatgctgaccacattgagaccattaagtcacgcatgtacgtgggccttaccccggag
cagaggttccttccaggagagctagggatgggccttgtggagggatacgattccatgggc
ttcgagatgtccaagcctgaccttcgagctgagctggaggcggatctgaagcttgtttgt
gaaggcaaaaaggataagttcaccgtcctgagacagcaagtacagaactacaagcaggtc
ttcatagaggctgcagccaaagccaccaagctggacgaggctctgtctcagtactttggc
caggcagcacagcctgtggaacagcaggagatctacccggaaacgccacttcctataaga
aaatgtccgcagtgtaacagggatatggtgctgaagaccaagaaagatggagggttctac
atttcgtgtttgggttaccccagctgtaaaacatcaatctggttgcccaatttcgttctg
gaagtgtcccgggatgatagcgtgtgtgatgtgtgtagacctcatccaatccacaagctg
aagctgaagtttaagcgtggcagcgtcccccctattatgcccctggagtttgtgggctgt
atcggtggctgtgatgaaactcttagagaaatcctcgatctgaaatatctacagggtggc
agcagagcaccccagcctggccttccccgtgagagcaaccgcgcgcaggttaaccagaga
aataaccgaataaccaacgatcgagatcgaggaggcccaaacaggcagccacccgccaaa
aaagagagaaaaccgcaactggtgacgccagctatacagagaaatgcgccgcccaccagt
gccaaccctgagaataatgaggtggtgtgcaactgtggtgtcaccgctgtgcagcttacc
gtgcgtaaagagggacccaaccaggggcgcccgttctacaaatgcgacggaggaaaatgc
aacttctttttgtgggcagatcaggagaacggggatagtaggagtccaccggcattgcag
gtgtctgcagggcgtccatcaacctcgttcaacagttccagggcccccgaagggtctcga
atggcaggaggaagcggggactcgggattgggaggagagactaagtgcatgtgcaatcag
ccagccatcacacgtactgtgcagaaggatggggccaacaaaggcagaccgttccacacg
tgctccaaacccagagagcaacagtgtggcttcttccagtgggccgacgagaacatccct
ccaggcccttctggagattttcctaccacatttggtggagggtctggagcacagcgagga
tttggtcaaaaaaataaaagaaccgataacgcagagaaagctccaacggcaaagagaccg
cgcacgtgtggcatctgtcaccagccaggccacaaccgaacaaactgcccacagaacaga
tga
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