Rana temporaria (common frog): 120943230
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Entry
120943230 CDS
T07929
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00260
Glycine, serine and threonine metabolism
rtem00630
Glyoxylate and dicarboxylate metabolism
rtem00670
One carbon pool by folate
rtem01100
Metabolic pathways
rtem01200
Carbon metabolism
rtem01230
Biosynthesis of amino acids
rtem01240
Biosynthesis of cofactors
rtem04981
Folate transport and metabolism
Module
rtem_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120943230 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120943230 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120943230 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120943230 (SHMT1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
120943230 (SHMT1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
120943230
NCBI-ProteinID:
XP_040212352
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Position
6:complement(20244947..20273545)
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AA seq
484 aa
AA seq
DB search
MAETPVINGGHTDLWTSHNQMVLEPLEVNDPEVYEIIRKEKHRQRYGLELIASENFASCA
VLQALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEVYNLDPQKWGVNVQPYSG
SPGNFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGY
IDYDRLAENARLFHPKLIIAGVSCYSRNLDYARMRTIANENNAVLMADMAHISGLVAAGV
VPSPFEHCDVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGREVLYNYESLINQAVFPGL
QGGPHNHAIAGVAVTLKQAMSPEFKMYQAQVISNCQALSATMEELGYHVVTGGSDNHLIL
VDLRNKNTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRLGTPALTSRGFREGDFKK
VAQFIHQGILITLEIQNDMSPKATLKEFKDQLDGDGKHREKINALKEEVEQFASSFPIPG
LPDL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacccccgtgattaatggcggacacacagatctgtggacctctcataaccag
atggtactggaacctttggaagttaatgatccagaggtgtacgaaattatccgtaaagag
aagcacagacagcgctacggcctggaactgatcgcctctgagaattttgccagctgcgca
gtcttgcaggctcttggctcctgcatgaacaacaagtattcggagggttatccaggacag
aggtactatggcggcacagagcatgtggatgagctggagaggctgtgtcagaaaagggcg
ctggaggtttataatctggacccacagaaatggggcgtcaatgtgcagccatattcaggc
tctcctggcaactttgctgtctacactgccttagtggagcctcatgggaggatcatggga
ttggaccttcccgatggcggtcatctcacgcatggctttatgaccgacaagaagaaaatc
tctgcaacatccatcttttttgagtctatgccatacaaggtaaatccagacaccggctac
atcgattatgacaggctggcggaaaatgcacgcctatttcatccaaaactaatcatagca
ggtgtcagctgctactcccgtaatttggactatgcacggatgcggaccatagccaatgaa
aataacgcagtccttatggctgacatggctcatattagtgggttggtggcggccggcgtt
gtcccatctccttttgaacactgtgatgtggtgaccaccacaacgcataaaacgctacgt
ggctgccgagccggcatgatcttttatcggaaaggagtgcgcagtgtggatccaaagact
ggaagagaggttctttataactatgagagtctgataaaccaggcggtgttcccaggtctg
caggggggaccacataatcatgctatagcaggtgttgctgtaacactgaagcaagctatg
agcccagagttcaaaatgtaccaggcacaagtcatctctaactgccaggcgctgtctgct
acgatggaggaactgggctaccacgttgtcactggtggttctgataatcatcttattctg
gtcgacctgcgcaataagaacacggatggagggagagcagaaaaggtccttgaagcttgt
gcaatagcgtgcaacaagaacacctgtcctggtgacaagagcgcccttcgccccagtggt
ttgcgccttgggacccccgccctgacctctcgggggtttagggaaggagacttcaagaaa
gtcgcacagtttattcatcagggcatcttgatcacactggagatccagaatgacatgagc
cccaaagcaacccttaaagagttcaaagaccaactggacggagatggtaaacatcgggag
aagatcaatgctctgaaggaggaggtggagcagtttgcaagctctttccctatccctggc
ctgcctgacctgtga
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