KEGG   Rana temporaria (common frog): 120943383
Entry
120943383         CDS       T07929                                 
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
rtem  Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rtem03037]
    120943383 (IFT140)
Cilium and associated proteins [BR:rtem03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   120943383 (IFT140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_EML_2 TPR_IFT80_172 Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR35_TULP_N TPR_2 WDR55 WD40_Prp19 Beta-prop_WDR90_POC16_2nd TPR_COPA_B TPR_GEMI5 TPR_14 PPR PPR_2 tRNA_int_end_N2 RPN7 TRL
Other DBs
NCBI-GeneID: 120943383
NCBI-ProteinID: XP_040212591
LinkDB
Position
6:34033553..34198418
AA seq 1452 aa
MAVYFDHRIEAPNPAASPSNISWHSQHALLAVASISSLSGGCVDVYSELGEHVTASHVER
SYQPTLLSWHPTKRLLAMGWVTGEVVIFNEQDKEFHTVPPTHGAEITLLVWSVNNSRLLT
GDLNGLLIVWKLDQRGRVQGAPLLKLEYHKPLTHCIFKPVAPEEDMTQLAKAAVSGDEKA
LDKFNWKIKTGTQQEFSFFVSTGDGSIHWVNEQGKSMQIIGMDSPVRTLLFIEKKSTLVV
ISENFLLLRFFITPEGDAEEISKVKLTGRIGKTTDILCIEKTLLVTATGESVLRFWDLER
DDNYVLFLDEQLGFEAEETINCISYCDAKAMLAAGTSKGKVAMWSKVTGGPKSLKTDGKD
SWKLRTPTELEGNITQVQWGSSKNLLSVNNLSCVLVLSEHVMSSHFHQQVAAIQVAPSQL
SITFFSTGATHSLKTDMYIIGVFVTKEYVAVWNGKQVTVYELNGPTLRNTGSFASDSPVL
AIHEENIYTVEPNRVQIRTLQGTVKQLLQFSVSEGSPCFLDICGGFLVVATNSAHFKLFD
LSRREAKAHSNCKNLCELVPGLGSIVSIRCNANGSKVSILANRAEGNLDSKMYFYDVELD
TVTFFDFWNGQADQGDSPTPSNPDSNLPENSKLFDRIPINHFWDQSEPRLLVCEAMLAIP
NSLHPSPKHNQLVEVPHGKEDVLVMSFFSTQEHGLLLQESYPRPAALQSLLGIEVPYCYF
TKKSGEEDEKSVPGEEGTPDIPHMVAKKPLRDFIGLEDCEKVTRDALLNFSFYLTVGDMD
EAFKSIKLIKSETVWENMARMCVKTRRLDVAKVCLGKMGHARGAKALREAEQEPEIEARV
AMLAVQLGMLEDAEQLYKTCKRYDLLNKLYQAWGQWKKAMEIAENHDRVHLRTTYYQYAK
HMEAMGDRNDSLNYYEKSDTHRFEVPRMLLEDPQALEIYINKKKDKNLWKWWAQYLESQA
DLDSALKYYEMAQDYLSLVRVHCFLRNIQKAAEIANETGNLAASYHLARQYESQADLKQA
VHFYTRAQAYNNAIRLCKENNLDDQLMNLALLSTPEDMMDAARYYEEQGEQMDRAVMLYH
KSGHLSKALELAFATEQFGALQLIAEELDEKSDPALLARCSDFFIQHNQFDKAVELLLAA
KKYYDALQLCLEQNLIITEDMAEKMTVSKNSKELSEEARRELLERIADCCMRQGNYHLAT
KKYTQAGNKLKAMRSLLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDWRQDPYIVNNI
ITFYTKGRALDLLAGFYDACAQAEIDEYQNYEKALGALTEAYKCLTKAKMRSPEDQERKL
SEMQNKLTLVKRFIQARRSYSVDKQDAIRQCELLLEEPDLESAVRFGDVYAVLVEHYTQQ
GDFQKAYRCLEEMRSKMPSVNLTYYVSQSTVEAVYRALSIPLSHKPASEHVRHNSVDDSE
EVEEAPDIYFDG
NT seq 4359 nt   +upstreamnt  +downstreamnt
atggcggtgtattttgaccatcggatcgaagctccgaaccctgcagcatccccatcaaac
atctcttggcacagccaacatgctctgctggccgtggcttccatcagctcgttgtcagga
ggttgtgtggacgtttacagtgaactgggtgaacatgtcactgcttcgcatgtggaaagg
tcctaccagcctactttgcttagctggcacccaacaaaacgccttcttgccatgggctgg
gtcacgggagaggtggtcatttttaacgagcaggataaagagtttcacacagtgcctcca
acacatggcgcagagattacattgctggtgtggagcgttaacaacagccgtctgcttact
ggagacttgaatggtctgttgattgtgtggaaattggatcagcgaggtcgtgttcagggt
gcccccttactgaagttggaataccacaagccattgactcactgcatctttaaaccagta
gcccctgaagaggatatgacccagctggctaaggctgcagtgagtggcgatgagaaagcc
cttgataaatttaattggaaaataaagacgggaacacagcaagagttttccttcttcgtc
agcacaggagatggttcgatacactgggtgaatgaacagggtaaaagtatgcagataatt
ggtatggacagtcctgtgcgcacactgcttttcatagagaagaaatctacgctggttgtg
atctctgagaacttcctgctcttgcggttcttcataactccagaaggggacgctgaggag
atctcaaaggtgaagctgactgggaggatcgggaagacgacggacattctttgtattgag
aagactctgcttgttacagctacaggagaaagtgtcttaagattctgggacctggagcga
gatgacaattatgtcttattcctggatgaacagttgggatttgaagctgaggagaccatt
aactgtatatcttattgtgatgctaaagccatgttggcagctggaaccagtaaaggcaag
gtcgccatgtggagcaaagtaactggtgggccaaaatctttaaagaccgatggaaaagac
agctggaaactgaggaccccaacagaactagagggcaacattactcaagtacagtgggga
tcctccaaaaatctcttatccgtgaacaatctcagctgtgtcctggtcctcagtgaacat
gtcatgtcttctcattttcaccaacaagttgcagccatccaagtggccccttctcagctc
agtataactttcttcagtacgggggccacccacagcctaaagactgatatgtatatcata
ggggtcttcgtcacaaaagaatatgtcgcagtgtggaacggaaagcaggtgactgtctat
gaactcaatggaccaacactgaggaacacaggctcctttgctagtgactctcctgtgctg
gcaatacacgaagaaaacatctacactgtggagccaaatagagtccaaattcgcacttta
cagggtactgtgaagcagttactccaattctctgtgtcagaggggagtccgtgtttcctg
gacatatgtggaggattcctggtggtagccacaaattctgcacattttaagctctttgac
ctctccagaagggaagccaaagcccacagcaactgtaaaaacctgtgtgagctggtgcca
ggactgggcagcattgtgtccatcaggtgtaatgccaatggcagtaaagtcagcatcctt
gccaaccgggctgaaggcaacttggactccaaaatgtacttctatgatgttgaactggac
actgtgactttctttgacttttggaatggacaagcagaccaaggagattcaccaacacca
tccaatccagactcgaatctcccagagaactccaagcttttcgatcgaatcccaatcaat
cacttctgggaccagagtgagccgcgactcttggtttgtgaggcaatgttggctatccca
aactccctgcacccatcaccaaaacataaccagcttgtggaggtccctcatggaaaggaa
gatgtgctggtcatgtcatttttcagcacccaagaacatggtttgctacttcaggaaagc
taccccaggccagcagccctccaatcacttcttggtatagaagttccatactgttatttc
acaaagaagtcaggagaagaagatgagaaatctgtccccggagaagaaggcacaccagat
atcccccatatggtggcaaagaaacctctacgagattttatcgggttggaggattgtgaa
aaggtaacccgggatgccctgcttaacttcagcttctacctcaccgtgggagacatggac
gaagcctttaaatcaatcaagctcattaagagtgaaacggtgtgggaaaatatggcacgt
atgtgcgtcaagacaagaagactggatgtagccaaagtgtgccttggaaagatgggccat
gccagaggtgcaaaggcattgcgagaggcagagcaagagccggagatcgaggccagagtg
gccatgttggctgtacagctaggcatgctggaagatgcagaacagctgtataaaacttgt
aagcgttatgatcttctgaataaactgtaccaggcgtggggacagtggaaaaaagccatg
gagattgcagagaaccatgaccgagtacacctacgcaccacctactaccagtatgccaag
cacatggaagccatgggagaccgcaatgattccctcaactactatgagaagtcagatacg
caccgctttgaggttccaagaatgcttctggaagatcctcaggccttggagatctacatc
aataagaagaaagacaaaaatctttggaagtggtgggctcagtacttggaaagccaggct
gacctggacagtgccctcaagtactatgagatggctcaggactacctgtctctggtgcga
gtgcattgcttcctgaggaacattcaaaaggcggcagagatagccaatgagaccggtaac
ttggcagcttcctaccacctggcacgtcagtatgaaagccaagcggatctgaaacaagcc
gtgcacttctacaccagggcgcaagcttacaacaacgctatccgactctgcaaggagaac
aatcttgatgatcaactcatgaacctcgctttgctgagcactccggaggatatgatggat
gctgcacgttattatgaggagcagggggagcagatggatagagctgttatgctttatcac
aagtcgggtcacctctctaaggcactggagttggcatttgccactgagcagtttggcgct
cttcagttaatagcggaggaactggatgaaaagtcagacccagctttacttgcccgttgc
tcagactttttcatccagcacaaccagtttgataaggctgtggagttgcttttagcagct
aaaaagtactacgatgctcttcagctctgcctagagcagaacctcatcatcacggaagac
atggccgaaaaaatgacggtgtctaaaaactccaaggagctcagcgaggaagcgaggcga
gagctgctggagcgcattgcagactgctgcatgagacaagggaactatcatcttgccacc
aagaaatacacccaggctggaaacaagctgaaggccatgaggtccttacttaagtctggt
gacactgagaagattgtcttctttgctggagtgtcccgtcaaaaggaaatctatatcatg
gcagccaattatctgcagtctctggactggcgccaagacccctacattgtcaataacatc
atcaccttctacacaaagggcagggcccttgaccttttagctggcttctatgatgcctgt
gctcaggcagagattgatgagtaccagaactatgagaaggccctgggagctctgactgag
gcctacaaatgtctgacaaaagccaagatgagaagcccagaggatcaggagagaaaactg
tctgaaatgcagaacaagctgacgctggtaaagaggtttattcaagctcgcagatcctat
tctgtagacaagcaagacgctatcaggcagtgcgaactgctgctggaagagccagatctg
gagagtgctgtgcgttttggggatgtgtacgctgtgctggtggaacattacacacagcaa
ggagacttccagaaggcctaccgttgtttggaggaaatgaggtccaagatgccatctgtc
aacctgacctattatgtatcccagagcacagtggaagccgtgtatcgggccctctccatt
ccactgagccacaagccagcatctgagcacgtgcgacacaacagtgtggatgacagcgag
gaggtggaagaggcaccagatatctattttgacggttaa

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