Rana temporaria (common frog): 120943482
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Entry
120943482 CDS
T07929
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120943482 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120943482 (USP42)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120943482 (USP42)
Peptidases and inhibitors [BR:
rtem01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120943482 (USP42)
Ubiquitin system [BR:
rtem04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120943482 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Actin_micro
Motif
Other DBs
NCBI-GeneID:
120943482
NCBI-ProteinID:
XP_040212743
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All DBs
Position
6:54045605..54114477
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AA seq
936 aa
AA seq
DB search
MTIIDKVSPVSATCQNQLCKSISPSSGEIETGSTTLGVVSALAKTSLGPVPGAAVYSSSS
VPEKPVPSEQNDPPLAVPGDGVGTPEKIIFPAEKIRLKWQRMQKVGAGLQNLGNTCFVNS
VLQCLTYTAPLANHMLSREHAKTCREQDFCMMCVMQSHIVQALSNTGNVIKPTGVINDLR
RIAKHFRLGSQEDAHEFLRYTVDEMQKSCLNGYISYGRRTQATTFIHQVFGGCLRSRVKC
LKCKSVSDTYEDCLDIALEIKASHSINQALEEFVKAEQLEGDNAYKCSKCNQLVTATKKF
TIHRTSNVLTLSLKRFASFSGGKLSKEIKYPEYLDIRPYTSHPNGDALVYKLYAVLVHSG
FSCHTGHYYSYIKASNDQWYLMNDSIVSSADIRTVLNQQAYLLFYIRSQNVPSGDASYAL
QSASPNSPQPSCSQRASVSKFLFVGPQQIIKNVKHMNGNRSPKSSVNGPVLNNNCANVKR
PMGGLPVNRQVSINSTVKKQKITITINKPHPVLQGPSFHDSPNTESATSASLTSTTTKPC
PMQSTSSVPTQSESKHAPIRLNRGTLVNGKSKVTSNLLVPYGTESSEESEEEQKGIRKRR
WSGKCTDGGVSANGLGAPTDMLDRTDRLKEESVTPLESSPANRVELTNHGTYEPSMSCSH
NGENHVGSNTSVCVCEMSKDTESSYVLVTENTATTAASPPSYACEITASEQRPQLQTEKA
VIKPEIPPNEETSIRLMDAENVGENKSLPQSSGSSEDHKRNGDRRSQSFDRSKHDRYRSS
DRENRHRENSSSGHYKHRDYDRPRSRSRGRTGDRYSYNHSKRDRSRSREKHRRHYSPYRD
RGHYDKDYWACKDYKSGWANNSRGRDHGYNFKYSNHFYSRNFEPYHHRKPNGYSSYHQDY
GSSKKRKYHHDGSLGEEDYERGFKRHRSPSDWSRER
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgactataattgataaagtttctccagtgagtgcaacatgccagaaccagctttgcaag
tccatttcaccatcttctggagaaatagaaacaggttcgacaactttgggcgtagtatca
gccttagctaaaacgtctcttggaccagtacctggtgctgccgtctattcaagctcatct
gttcctgaaaagcccgtgccttcggagcagaatgatccaccattggcagtaccaggggat
ggcgttggcacaccagaaaagattatttttcctgcagagaaaataaggctgaaatggcag
cgaatgcagaaggttggagctggtctccaaaatcttggcaatacatgctttgtcaactct
gtgctgcagtgcttaacttacactgcacctcttgcaaaccacatgctgagccgcgagcac
gcaaagacatgtcgggagcaagatttctgtatgatgtgtgttatgcagtctcacatcgtt
caggctttgtccaacacgggcaatgtcatcaagccaacgggtgttattaatgacttaaga
cgtattgcaaaacatttccgtttggggagtcaagaggacgctcatgaatttcttcgttat
actgtagatgaaatgcaaaaatcttgtctcaatggttacatcagctatggcagacgtaca
caagcaactacttttatacatcaagtatttggtggttgtctgcgatctcgagtaaaatgt
ctgaagtgcaaatcggtgtccgatacatatgaagattgccttgacatcgcactggagata
aaggcttcacatagtataaaccaagctctggaagagtttgtaaaagccgaacagcttgaa
ggcgacaacgcatacaaatgcagcaagtgtaatcagttggttacggcaacaaagaaattt
acaattcatagaacatctaatgtcctgactctgtctttgaaaagatttgcaagtttcagt
ggaggaaaactttcaaaggaaattaaatacccagaataccttgacatccgtccatacacc
tctcatccaaatggagatgcacttgtatacaaattgtatgctgtacttgtacacagtggc
tttagttgtcatactggacattactattcatatataaaggctagtaatgaccagtggtac
cttatgaacgattctattgtgtctagcgcagacatcaggacagtcctcaatcagcaggca
taccttttattctacatcagatcccaaaatgttcctagtggtgatgcatcgtatgctctc
cagtcagccagccctaattccccgcaacccagctgcagtcagagggcaagtgtttccaaa
tttttgtttgtaggacctcagcagatcattaagaatgtgaaacacatgaatgggaatcgg
tcaccaaaatcttcagtaaatggtccagttctaaacaataattgtgctaacgttaaaagg
ccaatgggtggactgccagtcaaccggcaagtgtcgattaactcaacagtcaaaaaacaa
aaaattaccatcactataaacaagccgcatcctgttcttcaaggaccatcctttcacgat
tctcccaatactgagtctgcaactagtgcaagcttgacatctactactactaaaccatgt
ccaatgcagtctacctcaagtgtccctacacaatccgaatcaaagcatgcaccaatcagg
ttgaaccgtggaactttagtcaatggcaagtctaaagtaacatccaacttgttagttcct
tatggtacagaatcttctgaagaatctgaagaagaacagaaagggatacgcaagagaaga
tggagtgggaagtgtacagatggaggggtttcagcaaacggtcttggtgcacctacagat
atgctagacaggactgaccgtttgaaagaggaatctgtaacacctttagaatccagtcca
gctaatcgggttgagctcactaatcatggcacttatgaaccatcaatgtcctgttcccac
aatggcgaaaatcatgtaggatctaatacatctgtttgcgtctgtgaaatgtctaaggat
actgaatcttcatacgttctggtcacagagaacaccgctacaacagcagcttcaccacca
agctatgcatgtgaaattacagcatcagagcagagaccccagctgcaaacagaaaaggct
gtgataaaaccagaaatcccaccgaacgaggagactagcatcaggttaatggacgctgag
aacgttggagagaacaagtcactaccacagtcttctggatcctcagaagaccacaaaagg
aacggagatagacggtcacaaagctttgacagatccaaacatgaccgatataggtcgtcg
gatagggaaaacagacacagggaaaactccagtagtggacactacaaacacagagactat
gataggccgcgctctagaagcagagggagaactggagatcgctattcatataaccattct
aaaagggatcgatcaagaagcagggagaaacacagaagacattattctccttatagagat
cgagggcattatgataaggactattgggcctgcaaagactacaaatctggatgggccaac
aatagcagggggcgtgatcatggctataacttcaaatacagcaatcacttttattcacgt
aattttgagccctatcaccacagaaaacctaacggttactccagctaccatcaagattat
ggaagctcgaaaaaaagaaaataccatcacgatggcagtttaggagaggaagactatgaa
cgtggctttaaacgccaccgctcaccttccgactggtcacgagaacgatga
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