Rana temporaria (common frog): 120943542
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Entry
120943542 CDS
T07929
Symbol
XYLT1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rtem00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
rtem01100
Metabolic pathways
Module
rtem_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120943542 (XYLT1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
120943542 (XYLT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtem01003
]
120943542 (XYLT1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
120943542 (XYLT1)
Glycosyltransferases [BR:
rtem01003
]
O-Glycan biosynthesis
Glycosaminoglycan
120943542 (XYLT1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
120943542
NCBI-ProteinID:
XP_040212842
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All DBs
Position
6:complement(62988040..63409730)
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AA seq
916 aa
AA seq
DB search
MVAASCPRRLARRSRSAIVAALTVLLIQTLIVWNFSSLDSGDEQRGERGGGGSRDKRDIS
DRERPRLGQEQHRRGAAAAALHSQALDGYFSHRPKEKMRTDSNNENSVPKDFENIDNSNF
APRTQRHKLQTEVGKTTLSKQKEHLKRKLALEDKVKENSLLGKNSNEVLHYGGNPSKNLS
TNSLKDGYKSSKLHHAKKTGSSSPEIKYELPPKCEITGKEAISALSRAKSKQCRQEIAEV
YCQHKQGKLMPEKVTRLCPLEGKANNNVQWDEDSVEYMATNPVRIAFVLVVHGRASRQLQ
RMFKAIYHKDHYFYIHCDKRSNYLHRQVVQFASQYPNVRVTSWRMSTIWGGASLLSTYLQ
SMRDLLEMSDWSWDFFINLSAADYPVRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQG
LDRLFLECDTHMWRLGDRKIPEGITVDGGSDWFLLNRKFVEYVIFSNDDLVMNMKRFYSY
TLLPAESFFHTVLENSPYCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPSD
FHRFQQTARPTFFARKFEAAVNQEIVGQLDYYLYGNYPSGTPGLRSYWENLYDEPDGIHS
ISDVMLTMFHSFSRMGLKRAEASLHTDGENSCRYYPMGHPVSVHLYFLADRFQGFLIKHH
ATNLAVSKLETLETWVMPKKVFKIANPTSDFGRLQFSEAGTEWDAKERIFRNFGGIMGPM
EEPTAMQKWGKGPNITVTVVWIDPVNIIAATYDILIESTAEYTHYKPPLNLPLRPGIWTI
RVLHHWVPVAETRFLISPLTFSNRQPIKSDEVGKFHGGPSKKAYMEQSFQGLNPVLNIPI
NSMQVEQAKKNAGLIGSKLESWVDSLASNIWSAVDICTTGPSSCPVMQSCSQTAWSSLSP
DPKSELGLVKPDGRLR
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcttcctgccctcgcaggctggcccggcgctctcgctcggcgatcgtagcg
gctctgaccgtcttgctcatccagactctgatcgtatggaatttcagcagcctggattct
ggggatgagcagaggggggaacgaggaggcggcggcagccgggacaagagggacatcagc
gacagagaacgtccccggctaggacaggagcagcaccgcagaggagccgcagcggcggca
ctgcacagccaggctctggatggatatttttctcaccggccaaaagagaaaatgaggaca
gacagcaataatgaaaattccgttcctaaagactttgaaaatattgataatagtaacttt
gctccaaggactcaaaggcataagcttcagacagaagtaggaaaaacaactcttagcaag
cagaaagaacatttaaaaaggaagctagcacttgaagacaaagtaaaggagaattcattg
ctaggtaaaaattccaatgaagtattacactatggaggtaacccttcaaagaacctcagc
actaacagcctcaaagatggatataaaagctctaaattgcaccatgcaaagaagactgga
agtagctctccagaaattaagtatgagctacccccaaaatgtgagatcacgggtaaagaa
gcaatatcagcactttctcgggctaagtcaaaacaatgtcgtcaggagattgctgaagtc
tattgtcaacacaagcaaggaaaactaatgccggagaaagtaacaagactttgtccttta
gaaggaaaggcaaataacaatgtacagtgggatgaagattcagtggaatatatggcgacc
aatcccgtgaggatagcgtttgttttggttgttcatggcagagcctctcgacaactccag
cgaatgtttaaggcaatttaccacaaggaccattacttctacattcattgtgataagaga
tccaactacctgcacagacaagtagtccagtttgccagccaatatcctaatgtacgtgtc
acttcatggagaatgtcgaccatctggggaggggcgagtcttctgtccacctacttgcaa
agtatgagggacctcctagagatgtctgactggtcttgggatttcttcatcaatctcagt
gcagccgactatccagtcaggacaaatgaccagttggtggctttcctctcgagatatcgt
gatatgaactttttgaagtcacacggaagagataacgcaaggttcatcagaaaacagggc
ctggacaggttgtttctggaatgtgacacacacatgtggcgtcttggggatagaaagatt
ccagaaggcattactgtagatggtggctctgactggtttctcttgaacaggaagtttgtc
gagtatgtgatcttttctaatgacgatcttgttatgaatatgaagcgattctattcctac
acactgcttccagctgagtccttctttcatacggtgttagaaaacagcccttactgtgac
accatggttgacaataatttgcgaattacaaactggaatagaaaactaggctgcaaatgt
caatacaaacacattgttgactggtgtggctgctctccaaatgacttcaaaccttctgat
tttcaccgctttcagcaaacagcaagaccaacattctttgcacgtaaatttgaagctgca
gtgaaccaagaaatagttgggcaactggactattatttgtatggcaattacccatctggc
acaccaggcctgagatcatattgggagaacctgtatgatgaacctgatggtatccacagt
atcagcgatgtcatgttgactatgttccattcgttttcccgcatgggactcaaaagagct
gaagcatccctacacacagatggagaaaacagctgccgatactatcccatgggccacccg
gtttcagtccatctttatttccttgctgaccgcttccagggttttcttattaaacatcat
gccactaatcttgcagtcagtaagctggagacattggagacctgggtaatgccaaagaag
gtctttaagattgccaatcccactagtgattttggcaggctgcagttttctgaggcagga
acggagtgggacgccaaagaaagaatatttcggaattttggtggtatcatggggcctatg
gaggagccaactgcaatgcagaagtggggaaaaggacccaatattacagtcacggtggtg
tggattgatcctgtaaacatcattgctgctacatatgacattttaattgaatccacagca
gagtatactcattataaaccacccctgaacttgcctctcaggccaggaatctggactatt
cgcgttcttcatcactgggtccctgtagctgaaacaagatttttgatatcgcccttgact
ttttcaaataggcagccaataaagagtgatgaagttgggaaatttcatggaggaccttca
aaaaaggcttacatggaacagagtttccagggactgaacccagtattaaatataccaatt
aattccatgcaagtggagcaagcaaaaaagaatgctggacttataggttctaaactagaa
agctgggttgacagcttggcaagcaacatctggtcagcagtggacatctgcaccacagga
ccatcctcctgtccagtcatgcagtcctgctcccagactgcatggagctcacttagtcct
gaccccaaatcagaacttggccttgtcaaacctgatgggagattgaggtag
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