Rana temporaria (common frog): 120943670
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Entry
120943670 CDS
T07929
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04136
Autophagy - other
rtem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120943670 (WIPI2)
04136 Autophagy - other
120943670 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120943670 (WIPI2)
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120943670 (WIPI2)
Membrane trafficking [BR:
rtem04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120943670 (WIPI2)
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120943670 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
DUF7165
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
Ribo_biogen_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
120943670
NCBI-ProteinID:
XP_040213024
LinkDB
All DBs
Position
6:complement(103239114..103283762)
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AA seq
435 aa
AA seq
DB search
MNLASQNVEAGAAQLLFANFNQDNTSLAVGIKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINGDNCYLAYPGSASIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDATGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVTIFSLAFSM
DGIFLSASSNTETVHIFKLETVKEKPVEEPTTWTGYFGKVIMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICALAMIQKIPRLLVGAADGYLYIYNLDPQEGGECTLMKQHRLDGS
MEPGNEILESASHERPLVSKNYSGAATKDTYSTSPTNHAFSDELGAVGGTSLEDDTHALR
LDEDSETPPMVLRTE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagaacgtggaggccggagcggctcagctcttattcgccaacttc
aaccaggacaacacatccctggctgttggtatcaagtctggatataagtttttctccttg
tcatctgtggacaaactagagcaaatatatgaatgcactgatacggaggatgtctgcatt
gtggaacgactgttttccagtagtttggttgctattgtcagtcttaaagcgccacgaaaa
cttaaagtatgccattttaaaaaaggaacagaaatctgtaactacagctactctaacaca
attttggctgtgaagctaaatcgtcagaggctgattgtatgccttgaggagtctctctac
atacacaatataagagacatgaaagtcctgcacactattcgagaaactcctcctaaccct
gcaggtctatgtgcactgtccattaatggagacaactgctatttagcatatcctggtagt
gcatctattggagaggtccaggtctttgacactgttaatctgagagctgctaatatgatc
cctgctcatgacagtcctttggcagctttagcgtttgatgcaactgggacaaaactagca
accgcatcagaaaagggcacagtgatccgtgttttttccattccagaaggtcaaaaacta
tttgaattccggagaggagtcaaaaggtgtgtgacaatattttccctagctttcagcatg
gatggcatctttctgtccgcctcaagtaacacagaaactgtgcatattttcaagttggag
actgtgaaagaaaagcctgtcgaggagccaaccacctggacgggttattttggaaaagtt
ataatggcttccaccagttacttgccctctcaagtaactgaaatgtttaaccaaggaaga
gcttttgcaactgttcgtttgcctttttgtggtcacaaaaacatctgtgcattagcaatg
attcaaaagattcctcgtttacttgttggtgcagcagatgggtacctttacatttataac
ctggacccacaggagggcggcgagtgcacgctaatgaaacaacacaggttggatggcagt
atggagcccggcaacgaaattctagagtcggcatcacatgaaagaccattagtatccaag
aactacagtggtgcagcaacaaaagatacatattctacatcaccaacaaatcatgccttt
tctgatgaacttggagctgtgggtgggacaagcctggaagatgacacccatgctcttcgg
ctagatgaagacagtgagaccccccccatggttttgagaaccgagtga
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