Rana temporaria (common frog): 120943685
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Entry
120943685 CDS
T07929
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120943685 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120943685 (HSPD1)
03110 Chaperones and folding catalysts [BR:
rtem03110
]
120943685 (HSPD1)
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120943685 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120943685 (HSPD1)
Enzymes [BR:
rtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120943685 (HSPD1)
Messenger RNA biogenesis [BR:
rtem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120943685 (HSPD1)
Chaperones and folding catalysts [BR:
rtem03110
]
Heat shock proteins
HSP60 / Chaperonin
120943685 (HSPD1)
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120943685 (HSPD1)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120943685 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
120943685 (HSPD1)
Exosomal proteins of breast cancer cells
120943685 (HSPD1)
Exosomal proteins of colorectal cancer cells
120943685 (HSPD1)
Exosomal proteins of bladder cancer cells
120943685 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
120943685
NCBI-ProteinID:
XP_040213060
LinkDB
All DBs
Position
6:complement(106805393..106832237)
Genome browser
AA seq
575 aa
AA seq
DB search
MLRLSTVLRQARPVSRTLVPCLCRAYAKEVKFGAEARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAVITELKKQSKPVTTPEEIAQVATISANGDH
EIGKIISDAMKKVGRNGVITVKDGKTLHDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIASGGVVFGEEALSLTIEDIQPHDFGKVGEVIVTKDDTMILKG
KGDKSQIEKRIAEIQEQLESTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDALIPSNEDQKIGIEIIRKTLKIPAMTIA
KNAGVEGSLIVEKILQSPVNIGYDAMLGEFVDMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKDPGMGGMGGMGGMGGMGGGMF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtttgtccaccgtactgcgccaagcgcgcccagtatcccgaaccctggttccc
tgtctttgccgagcctatgctaaagaggtgaagtttggagccgaagccagagcacttatg
ttgcaaggtgttgaccttctagccgatgctgttgcagtcactatggggccaaagggaaga
actgtcataattgagcagtcatgggggagtcctaaagtaaccaaagatggtgtcacagta
gcaaaagcaattgatctaaaagacaaatacaaaaacattggcgctagactagttcaagat
gttgccaataatacaaatgaagaagctggtgatggcacaactacagcaactgtccttgct
agagcaattgctaaggaaggttttgaaaaaatcagtaaaggtgcaaatccagttgaaatc
agaagaggtgttatgttggcggttgatgctgtaattacagagttgaagaaacagtcaaaa
cctgtaacaacaccagaagagatagcacaggtggctacaatatctgcaaatggagatcat
gaaattggcaaaataatttcggatgccatgaaaaaagttggtcgcaatggtgtaataact
gtcaaggatgggaaaacacttcatgatgaactggagataattgaaggtttgaagtttgat
cgaggctacatctctccctattttataaacactgctaaaggtcaaaaatgtgaattccaa
gatgcatatcttctgcttagtgaaaagaaaatttctagtgttcagtctatagttccagct
cttgagattgccaatgcccaccgcaagcctttagtcattatagctgaagatgttgatggg
gaagctttgagtactttggttttaaacaggctgaaagttggtcttcaggtagttgctgtg
aaagccccaggttttggtgataatcgcaaaaatcagcttaaggatatggccattgcttca
ggtggagttgtttttggagaagaggctctcagcttgactattgaagacattcagccacat
gattttggaaaggtgggagaggttattgttacaaaggatgacacaatgatattgaaagga
aagggagacaagtcacagattgagaaaagaattgctgaaatccaggagcagttggaatct
acaaccagtgaatatgaaaaagaaaaattaaatgagcgactggctaagctttctgatggc
gttgctgtactaaaggttggtggaaccagtgatgttgaagttaatgaaaagaaggaccga
gtaacagatgctttgaatgccacacgtgcagcagtagaggaaggcattgtattaggcggt
ggctgtgcactgttgcgttgtataccagcgctggacgccttgataccatctaacgaggat
caaaaaattggaattgaaataatcagaaaaacactgaaaatccctgcaatgacgatagcg
aagaatgctggtgttgaaggatcattgattgttgagaaaatcctgcagagccctgttaac
attggatatgatgctatgcttggggaatttgttgatatggtggaaaaaggcatcattgac
cccactaaggttgtacggactgctctaatggatgcagcaggtgttgcttctctcttgtca
actgcagaagcagtagtgacagaaatcccaaaagaggagaaggatcctggtatgggtgga
atgggcggtatgggtggcatgggaggaatgggaggaggaatgttctaa
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