Rana temporaria (common frog): 120943691
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Entry
120943691 CDS
T07929
Symbol
STAT1
Name
(RefSeq) signal transducer and activator of transcription 1-alpha/beta isoform X1
KO
K11220
signal transducer and activator of transcription 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04217
Necroptosis
rtem04620
Toll-like receptor signaling pathway
rtem04621
NOD-like receptor signaling pathway
rtem04625
C-type lectin receptor signaling pathway
rtem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120943691 (STAT1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120943691 (STAT1)
04621 NOD-like receptor signaling pathway
120943691 (STAT1)
04625 C-type lectin receptor signaling pathway
120943691 (STAT1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120943691 (STAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120943691 (STAT1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
120943691 (STAT1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STAT_alpha
STAT_bind
STAT_int
STAT_linker
SH2
STAT1_TAZ2bind
ATG17_like
Motif
Other DBs
NCBI-GeneID:
120943691
NCBI-ProteinID:
XP_040213074
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All DBs
Position
6:107714564..107827042
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AA seq
750 aa
AA seq
DB search
MAQWYDLQQIDSKFLEQVHQLYDDSFPMEIRQYLAQWLEGQDWEHAANNVSLATILFHGL
LAQLDDQYSRFTVECNFLLQHNIRKSKRNLQDNFQEDPVQMAMIIYNCLKEETKILANAR
SFSQNQIGNTQNTVMMDKQRELDKKVTEIKNRALELEQEVKNLEELQDEYDFKCKTIQSR
GFCISENEHNGIAQNELKQEKLVLRNMHITVSLRRKEIVHRIGELLNGIDHTQSSLINEE
LVEWKRRQQIACIGGPPNACLDQLQTWFTSIAKSLQKIRQQLKKLEEFEQKLTYDSDPIT
NNKQALQERTQALFKQLIQSSFVVERQPCMPTHPQRSLVLKTSVQFTVKLRLLVKLPELN
YQLKVKAVFDKDVNEKNTVKGFRKFNILGTNTKVMNMEESTNGSLAAEFRHLQLKEQKNA
GNRTNEGPLIVTEELHSLSFETQLCHLGYVVDLETASLPIVVISNVSQLPSGWASILWYN
MLCPETKNLSFFLSPAVATWSQVMDVLSWQFSSATKRGLHTDQLSMLEEKLLGPNPTDDC
IPWTKFCKENLNDKNFPFWLWIEGILELIRKHLLCLWNDGCIMGFISKDKERMLLKDKEP
GTFLLRFSESSKEGAITFTWVERSQNEPVFHSVEPYTKRELSAVTFPDIIRNYKVMAAEN
IPENPLKFLYPDVPKDAAFGRYYTRPTDVPEPMDLDGPKTTGYIKTELISVSEVHPSRLA
TADSLLPMSPDDYAHLERLVPEGLMDSYSN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtggtacgacttacagcaaatcgattccaaattcttggaacaagtccatcag
ttatatgatgacagctttcccatggagataaggcagtatctggctcaatggctagaagga
caagactgggaacatgctgcaaacaatgtctctttggccacgattctcttccatggactt
ctagcccagttggatgaccagtacagcagatttaccgtggagtgcaacttcttattacaa
cataatatacggaaaagcaaacggaatctgcaggataacttccaggaagacccagtacaa
atggcgatgatcatttacaactgcctaaaagaagaaactaaaatcttggccaatgcacgt
tcattttctcagaatcagattggtaatacacaaaatacagtgatgatggacaagcaaaga
gagcttgataagaaggtcacagaaataaaaaacagagctttggaactagaacaagaagtc
aaaaatttggaggaattacaagatgaatatgacttcaaatgtaaaactatacaaagcaga
ggattttgcatttcagaaaatgagcataatggaattgcgcaaaatgaactgaagcaggaa
aagttggttttaagaaatatgcacattactgtgagccttcgaagaaaggaaattgttcat
agaataggcgaactgctaaatggcatagatcatacacagagttccctaattaatgaagaa
ctggttgaatggaagcgcagacaacaaatcgcttgcattggaggcccacctaatgcttgt
cttgaccaactgcaaacctggtttacatctattgctaaaagtctacagaaaatccgtcaa
cagttgaagaaactggaggagttcgagcagaaacttacatatgattctgatcccattacc
aacaacaagcaagccttgcaagaacgtacacaagctttattcaaacagctgatacagagc
tcttttgtggttgaaaggcaaccatgcatgcctacccacccacagagatccttggtccta
aaaaccagtgtccagttcactgtaaaactaagacttttggtaaaactaccggagcttaat
tatcagctaaaagtaaaagctgtatttgataaagatgtcaatgagaagaatacagtaaaa
ggattccggaaatttaatattttaggtacaaacacaaaagtaatgaatatggaagaatcc
acaaatggaagtttagcagctgagttcagacatctgcaattaaaagaacaaaagaatgca
ggaaacaggactaatgaggggcctcttattgtgactgaggaactgcattcattgagtttt
gagacacagctttgccatcttggatatgtagtggatttggagacagcatcacttccaata
gtagtgatttccaatgtgagccagctccccagtggctgggcttctattctatggtataat
atgctgtgccctgagacaaagaacttatcctttttcttaagcccagcagtagccacatgg
tcccaggtgatggacgtactcagctggcagttttcttcagcaaccaaaagaggacttcac
acagaccagctgagtatgctggaagagaaattattagggccaaatcctactgatgactgt
attccatggacaaaattctgcaaggaaaatcttaatgataagaattttccattttggctt
tggattgagggcatcttggaactaattagaaagcatctattatgcctgtggaatgatggg
tgtattatgggttttataagcaaagataaagagcgtatgctactaaaagacaaagaaccc
ggcacatttttattgaggtttagtgaaagcagtaaagaaggagccatcacatttacctgg
gtggagagatcacaaaatgagccagtatttcattctgtggagccttatacaaagagggag
ctttctgctgtgacgtttccagacattattcgcaactataaagtaatggcagctgaaaac
attcctgaaaatccactgaaatttttatatccagacgtaccaaaagatgcagcatttgga
agatactacaccagacctacagatgttcctgaaccaatggatcttgatggacctaaaaca
acaggatacatcaaaacagaattaatatcagtatctgaagtacacccttcaagactggca
acagccgattctctgttaccaatgtctccagatgactatgctcatttagaaaggctcgta
cctgaaggtttgatggattcctacagcaattaa
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