Rana temporaria (common frog): 120943697
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Entry
120943697 CDS
T07929
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120943697 (PMS1)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120943697 (PMS1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
EssA
Motif
Other DBs
NCBI-GeneID:
120943697
NCBI-ProteinID:
XP_040213089
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All DBs
Position
6:108211831..108352186
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AA seq
889 aa
AA seq
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MHHLPSETIRLLSSSQVITSVVSVVKELVENALDANANSIEIKLENFGFDKIEVQDNGDG
IKAADAPVMGIKHYTSKITNHDDLEALETYGFRGEALGSICSVAEVHMTTKTAADEISTQ
YVLDNSGHVVSQKPSHLGQGTTVTVLHLFKNLPVRKQYFSTTKKCKAELKQVQDLLMAYG
IIKPGLRIVLVHNKVVIWQKNKVSDHKMALMSLLGTTVMNSMVPFQHQDDSEQIRIHGFL
PKREADSSVTGSSSSERSFIFINQRPVHHKEILKMVRSYYSEHTTSRSYPVFFMNIVVPA
SFVDVNLTPDKTQVMLQNKESVLSAVETTLKSVYSNPVLKEVDSVNAQFTEADVNIKDSS
KANDGNDMIVASTDPFERNAHTHLNNSDGKLENETEALITDPSANSGIWHNHNRPQHSST
EHVKDDEADREFECNTAGKPTEYENTMSNNSLETSDDNWSKGTAFKNSKGKNLQPVTILC
SSSDTNTNKSCEETGLIKGPKDPEKKSTNVISEKSGFITAFDLMSNRVIKKPMSARDIFT
QEYRINYLKDTPKIGFDDISTEMLDLWEQLGEEEKLQYEEKAAKDLQRYRQQTAKATEKN
MQKPKEADKRPRQVSGESTAQKIKRKTALSNQQILDTLFKSQVEKKASAPAVKTIQISFS
LSSLKQKNLCRLPGKEMEDTEFSLINKLNFPGAWVLASKRKITLMNPYRMEEMLLYKRLV
DNYKIPIEILDSPIVLTHRLFGETDYLSILLGMQKDYPKPNGHIYFSDPRLASNGFLIKM
IPGSADSHVEVEGMASILPFYGISDLKEILNFVMKKNTRELRDCRPLKVLNYLEGEAVRL
ARQLPLTLAKDDVYDTLSRMKKQFGDQTKGCIHGRPFYSHLADIPQDDE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacttgccgtcagaaaccatccgattactatccagctcccaggtgattacttct
gtagtcagtgtggttaaggagcttgtggagaatgccttggatgctaatgctaacagcatt
gaaataaaactagagaactttggatttgacaagatcgaggttcaggacaatggggatgga
attaaagcagcagatgctcctgttatgggcatcaaacactacacctccaaaattactaat
cacgacgacttggaagctttggagacctatggatttcgtggggaagctttgggttcgatc
tgctctgtagcagaggtgcatatgacaaccaagactgctgccgatgagatcagcacccag
tatgttttggataacagtggacatgttgtatctcagaagccatcacaccttggacaggga
actacagtcacagtcttacatttgttcaagaacttgccagtaagaaaacaatatttttcc
accaccaagaaatgtaaagcagagctcaaacaagttcaagaccttctaatggcatatgga
attattaaaccaggccttaggattgtgcttgtacacaataaggtggttatatggcagaag
aacaaagtatcagatcacaaaatggcactaatgtcacttttggggacaacagtcatgaac
agtatggttcctttccaacaccaagatgattcagagcagatcagaattcatgggtttctt
ccaaagcgagaggcagacagcagtgtgactggttcttcaagttcagaaaggagttttatt
ttcattaaccagcgaccagttcatcacaaggaaatattgaagatggttcgatcatactat
agcgaacatacaacttctcgttcttatcctgtgtttttcatgaatattgttgtccctgct
tcatttgtagatgttaatttaactccagataaaactcaagtaatgttacagaataaggaa
tccgtgctcagtgctgttgagactaccctgaagtctgtgtactccaatccagtactcaaa
gaagttgacagtgtcaatgcacagtttacagaagctgatgtgaacattaaagattcttca
aaagcaaatgatggcaatgatatgattgttgcatctactgatccttttgaacggaatgcg
cacacgcatttaaataatagtgatgggaaactggaaaacgagacggaagcccttataaca
gatccatcagccaacagtggtatttggcataaccataacagaccgcagcattccagcaca
gaacatgttaaagatgatgaagcggacagggaatttgaatgcaatactgctggaaaaccc
acagaatatgagaacaccatgtcaaataatagcctggaaacgtctgatgataattggagt
aaagggactgcttttaaaaattcgaaaggcaaaaacctacaacctgttacaatattgtgc
tcttcaagtgacacaaacaccaacaaaagctgtgaagaaactggtttaatcaagggcccc
aaagatcccgaaaagaaatctacaaatgtaatctctgagaaatctgggttcataactgct
tttgatttgatgagtaacagggttataaaaaaacccatgtctgcaagggatattttcacc
caagaataccgaattaattatcttaaggacacgccaaaaattggatttgatgacatttct
acggaaatgttggatctttgggaacaactcggtgaagaggaaaaacttcaatatgaggaa
aaagcagccaaggacctgcagcgatacaggcagcagactgcaaaagctacagaaaagaat
atgcaaaagccaaaagaggcagataaaagaccgaggcaggtttcaggcgaaagcactgct
caaaagataaaacggaaaacggcactctccaatcaacaaatactggatactttgtttaag
tcacaagttgaaaagaaagcatcagcacctgctgttaaaactatccaaatatcttttagc
ctgagcagcctaaaacagaagaatctgtgtaggcttccagggaaagaaatggaggataca
gaatttagcttaataaataaattgaattttcctggtgcttgggttttggcgtctaagaga
aaaataacattgatgaatccgtacagaatggaagaaatgttgttgtataaacgacttgtg
gacaattataaaattcccatagagattttggactctccaattgtattaacacataggttg
tttggagaaactgattacctctcaattcttttaggaatgcaaaaggactatccaaaacca
aatggacatatttatttttcagaccctagacttgcctctaatgggtttctaattaaaatg
ataccaggttctgcagatagccatgttgaggttgaaggaatggccagcattttgcctttt
tatggaatctctgatctaaaagaaattctaaactttgtaatgaagaaaaatacaagagaa
ctgcgtgactgtagacctcttaaagttttaaattatttagagggtgaagctgtaagactg
gcaagacaactacctttaaccctagcaaaagatgatgtgtatgacacattaagtcgaatg
aaaaaacagtttggagatcaaactaaaggatgcatccacggtcggccattttattctcac
ctagctgatattcctcaagatgatgagtag
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