Rana temporaria (common frog): 120943708 Help Entry 120943708         CDS       T07929                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism rtem  Rana temporaria (common frog) Pathway rtem04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:rtem00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     120943708 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:rtem00536]     120943708 (COL3A1) Glycosaminoglycan binding proteins [BR:rtem00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120943708 (COL3A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  120943708 NCBI-ProteinID:  XP_040213108 LinkDB All DBs Position 6:complement(110107423..110216250) Genome browser AA seq 1469 aa AA seqDB search MMSFVQISALLCILAVAYPSLVLAQQQQVEAACTHLGQVYADRDVWKPEPCQICVCDTGS VLCDEIMCDDNESECENPEIPFGECCPICPSPPSPTPAESANGKPGQKGSKGDNGIPGRN GENGSPGVPGPPGPPGPAGICEGCGSLNPGGGEPNYSPQYDSKSGYDFKSGAGHMGGQAM AGFPGPPGPAGPSGPAGQPGPHGYQGPAGESGQPGPPGSPGPAGNVGPPGQPGKDGESGR PGRPGERGVAGAPGNRGPPGMSGFPGMKGHRGIDGRDGGKGDTGAPGLRGEPGAAGDNGL PGSAGPRGQPGERGRAGSPGSAGARGNDGAPGSSGQSGPPGPPGNSGFPGGPGPKGEAGS PGSRGSDGSPGSRGEIGPQGPSGLTGPSGPPGRDGNPGGKGEIGPAGLPGAPGLGGARGQ PGPPGTNGSPGLRGPSGENGKDGGKGEAGPRGERGESGSPGAPGPAGEEGKKGTNGEPGT NGLPGTAGERGTPGFRGPPGSNGIPGEKGPPGERGAPGSAGPRGSSGESGRDGIPGPPGM RGSTGSPGGPGSDGKPGPQGPAGESGRSGNPGPPGSRGSPGVMGFPGPKGNEGQPGKNGE RGGPGSAGPQGLPGKSGDSGAQGPPGAAGPTGERGEPGAPGQAGFQGLPGSPGPAGENGK PGEAGPKGEVGGPGTPGGKGENGIPGERGLQGPPGTTGTRGASGPPGPDGGKGPAGPPGP GGAMGPPGLQGMPGERGGFGNPGPKGEKGEGGSRGGDGSPGKDGLRGSTGPIGPPGPAGP SGDKGEGGSAGPPGPVGARGGPGERGENGPPGPAGFPGAPGQNGEPGGKGDKGGSGERGE PGPQGAGGPQGGPGPAGNTGPQGSKGDRGAPGSAGTAGFPGARGLPGPPGTNGNSGPAGP PGGPGKDGPAGPSGSTGPPGSPGGAGPKGEPGTQGERGSPGNRGESGAPGPSGISGPVGS RGIVGLPGLQGRAGSPGIPGSKGEDGKPGTNGFPGERGSPGSPGAAGMNGAPGEAGRDGN SGSDGAPGRDGSSGPKGDRGENGSPGSSGSPGHPGAPGPVGPAGKNGDRGENGPAGPAGA SGPAGARGAPGPQGTRGDKGEAGERGTNGMKGHRGMPGNPGPPGSPGPSGEQGTAGSPGP LGPRGPAGSNGSPGKDGLSGYPGPIGPPGPRGSRGESGPEGSSGHPGPPGQPGSPGPPGP CCDGGGANLGSFGGEKGPAGSPYYGDQPFDATTTTEIMTSLKSINSQIENIISPDGTRKN PARNCRDLKLCHPEYKSGEYWIDPNQGCKMDAIKVFCNMETGETCINANPSSAPQKKWYT SSGTDKKHVYFGESMNGGFQFGYGDPDLPEDISDVQMAFLRILSSRGYQNITYHCKNSIA YMDAQSGNVKKAVKFMSSTESELKAEGNSKFTYTVLEDGCTKHTGEWGRTVFEYRTRKTM RLPIVDIAPMDIGGPDQEFGIEVGPVCFL NT seq 4410 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaatatccgccctcctctgcatccttgcagtggcttacccgtcc cttgttttggcacagcagcagcaagtggaagcagcatgtactcatcttggacaagtttat gcagacagggatgtctggaaaccagaaccttgccaaatctgtgtttgcgacactggatcc gttttgtgtgatgaaatcatgtgtgatgacaacgaatcagagtgtgaaaacccagagatt ccatttggagagtgctgcccaatatgtccatcacctccaagtcctaccccagctgaaagt gcaaatggaaaaccagggcaaaaaggatccaaaggtgacaatggcattcccggcagaaat ggtgagaatggcagtcctggtgtacccggtcctccaggtcctcctggtcctgctgggatt tgtgaaggctgtggttccctaaatcctggaggaggagagccgaattacagtcctcaatat gactccaaatctggatatgacttcaaatctggcgcaggtcacatggggggtcaagcaatg gctggttttcctggacctcctggccctgctggaccatctggccctgctggacaacctgga cctcatggatatcaaggacccgctggtgaatctggacagcctggaccacctggatctcca ggtccagctggaaatgtagggcctcctggtcaaccaggaaaagatggtgagtcaggccga ccaggcagacccggagaacgtggagtagctggagcccctggcaatagaggaccacctggc atgtctggttttcctggcatgaaaggccacagaggcattgatggaagggatggtggaaag ggggataccggtgctcctggacttaggggagaacctggtgcagctggagataatggatta cctggcagtgcaggtccaagaggacaacctggtgaaagaggtcgtgctggatctcctgga tcagctggtgcacgtggcaatgatggagctcctggatcttctggtcaatctggtcctcct ggtccccctggtaattctggattccccggtggtccaggccccaagggtgaagctggatct cctggttctcgtggttctgatggttctccaggatctagaggtgaaattggaccccaaggc ccatctggtttaacaggcccttctggtcctcctggcagagatggaaatcctggcggtaaa ggtgaaattggtcctgctggtcttcctggtgctcctggtttgggtggtgctcgtggtcaa ccaggtccccctggtactaatggatcacctggtttaagaggtccttcaggagaaaacggc aaagatggcggaaaaggagaggctggtccaagaggagaacgtggagaatctggatctccg ggtgcacctggacctgctggagaagaaggcaaaaagggaactaatggtgaaccgggaact aatggtctaccaggaactgcaggagaaagaggtacaccaggtttccgaggtcccccaggc agcaatggaattccaggcgaaaagggacctcctggagaacgtggagctccaggcagcgct ggaccaaggggaagttctggtgaatctggaagagatggaattcctggaccacccggaatg aggggttctactggaagtcctggtggtcctggatctgatggcaaaccagggccccaaggt cctgctggagaatctggacgatctggtaaccccggtccaccagggtcaagaggttcacct ggagtcatgggttttcctggtccaaagggtaatgagggtcaacctggtaaaaatggagaa aggggtggtcctggatctgctggaccacagggtcttcctgggaagagcggtgactcggga gcccagggtcctccgggtgcagcagggcctacaggtgaacgaggagaaccaggagcacct ggacaagctggcttccagggcctgccaggatctcctggacccgccggagaaaatggaaaa cctggtgaagcaggacctaaaggtgaagttggtggtcctggaaccccaggtggcaaaggt gaaaatggcattcccggtgaaagaggtctgcaaggtcctcctggaactactggtactaga ggtgcttctggtcctccaggtccagatggcgggaagggacctgctggaccacctgggccc ggtggtgcaatgggaccacctggtcttcaaggcatgcctggagaaagaggaggctttgga aatcctgggccaaaaggtgaaaagggagaaggtggaagcagaggcggagatggatcacct ggaaaagatggattgagaggttctactggccccattggcccccctggtcctgctggtcca tctggagacaagggtgaaggtggttcagctggacctcctgggcctgttggtgcacgtggt ggtcctggggaacgtggtgaaaatggtcctcctggtcctgctggctttcctggagctcct ggtcaaaatggagaacctggtggtaaaggagataaaggtggttctggtgagcgaggtgaa cctggtccccaaggtgctggtggtcctcaaggtggacctggtcctgctggtaatactggt cctcagggatcaaaaggagatcgtggtgctccaggatcagctggcacagctggtttccct ggtgctcgtggtttgcctggacctccaggtactaacggcaattctggtcctgctggtcct cccggaggccctggaaaggatggtccagctggtccatctggtagtactggtcctcctggt agtccaggtggtgcaggtccaaagggtgaaccaggtacacaaggagaaaggggatcacca ggaaatcgaggcgaatcgggtgctccaggtccttcaggaattagtggtccagttggctct cgtggtattgtaggattacctggattacagggtagagcaggaagtccgggtattccaggt tctaagggtgaagatggaaaaccaggtaccaatgggtttccaggtgaacgtggttcccct ggttcaccaggagcagctggaatgaatggggcccctggagaagctggaagagatggtaac tctggctccgatggtgcacctggacgtgatggatcatctggacctaagggtgaccgtggt gaaaatggctctcctggttcttctggatctcctggtcacccaggcgccccaggccctgtt ggcccagctggaaagaacggcgacagaggagaaaatggtcctgctggccctgctggcgca tctggtcctgctggtgcacgtggagctcctggaccacaaggtacacgtggtgataaaggt gaagctggtgagcgtggtaccaatggaatgaaaggtcatcgtggtatgcctggcaaccct ggcccccctggctcccctggaccttctggagaacaaggtactgctggatctcccggaccc ttaggtcctaggggtcctgctggatcaaatggatctccaggcaaagatggcctttctgga tatccaggacctattggccctccaggtcctcgaggtagcagaggagaatctggcccagag ggttcatctggtcatcctggacctccaggacagcctggttcccctggcccacctgggcct tgttgtgatggtggcggagctaatcttggatcatttggtggggagaaaggaccagctggt tccccatactatggcgatcaaccatttgatgcaacgaccactactgaaattatgacttcc cttaaatcaatcaacagccaaatagaaaacattattagtccagatggcacaagaaagaac cctgcccgtaactgtcgtgatcttaaattgtgtcacccagagtataagagtggagaatac tggatcgaccccaaccaaggctgtaaaatggatgctattaaggttttctgcaacatggaa actggtgaaacatgtataaatgccaatccaagtagcgccccacaaaagaaatggtacacc agctctggaactgataaaaaacatgtttattttggagagtctatgaatggtggtttccag ttcggctatggagatccagatcttccagaagatatatctgatgtccaaatggcattcctt agaattctgtccagcaggggctaccagaatatcacttaccactgcaagaacagcattgca tacatggatgcacaaagtggaaatgttaagaaggctgtgaaatttatgagctctaccgaa agtgagcttaaagctgaaggaaacagcaaatttacatacactgttttggaagacggttgc actaaacacacaggagaatggggtcgaacagtatttgaatacagaacacgcaaaacaatg aggctacctattgtagatattgcaccaatggatatcggtggaccagatcaagaattcgga attgaagtcggccctgtatgctttttgtaa

DBGET integrated database retrieval system