KEGG   Rana temporaria (common frog): 120943877
Entry
120943877         CDS       T07929                                 
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
  KO
K05717  fibronectin 1
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem04510  Focal adhesion
rtem04512  ECM-receptor interaction
rtem04518  Integrin signaling
rtem04810  Regulation of actin cytoskeleton
rtem04820  Cytoskeleton in muscle cells
rtem05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120943877 (FN1)
   04518 Integrin signaling
    120943877 (FN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120943877 (FN1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120943877 (FN1)
   04810 Regulation of actin cytoskeleton
    120943877 (FN1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    120943877 (FN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtem04131]
    120943877 (FN1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtem04147]
    120943877 (FN1)
   00536 Glycosaminoglycan binding proteins [BR:rtem00536]
    120943877 (FN1)
   04990 Domain-containing proteins not elsewhere classified [BR:rtem04990]
    120943877 (FN1)
Membrane trafficking [BR:rtem04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    120943877 (FN1)
Exosome [BR:rtem04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   120943877 (FN1)
Glycosaminoglycan binding proteins [BR:rtem00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   120943877 (FN1)
Domain-containing proteins not elsewhere classified [BR:rtem04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type I domain-containing proteins
   120943877 (FN1)
SSDB
Motif
Pfam: fn3 fn1 Fn3_PBP1 FN3_DSCAM-DSCAML_C Pur_ac_phosph_N fn2 Fn3_Dep-1_2nd Fn3_Dep-1_3rd Fn3_VIN3 NDNF FN3_Tor_3rd
Other DBs
NCBI-GeneID: 120943877
NCBI-ProteinID: XP_040213423
LinkDB
Position
6:145065267..145145955
AA seq 2465 aa
MPRGPLTGLLLALCVSAAVQAAPSERTKSRRQAQHAVQPVLAGDTSQRGCFDNGKTYNIG
QQWERIYLGNTLVCTCYGGIRGFNCESKPEAEETCFDKYTSTTYRVGETYERPKDNMIWD
CTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRAHETGGYMLECVCLGNSKGEWTCKPV
AERCYDNTAGTSYVVGQTWEKPYQGWMMVDCTCLGEGSGRITCSSRNRCNDQDTRTSYRI
GDTWSKTDARGNLLQCICTGNGRGEWKCERHSSATGVGVASGAQINIYPAVRDIEHCVAD
SGVLYTVGMKWLKSQGSQQMLCTCLGNGVSCEESVAIGTYGGNSNSDPCAFPFIHDGKTY
YYCTTEGRQDGELWCSTTSNYDEDKKYSFCTEQRAMVQTRGGNSNGALCHFPFLYNNRNY
TDCTSEGRRDNMKWCGTTLNYDVDQKFGFCPMAAHEEICTTNDGVMYRIGDQWDKMHDQG
HMMRCTCVGNGRGEWNCIAYSQLKDQCIVDGVTYDINQSFTKYHEEGHVMNCTCFGQGRG
RWKCDAVDQCQETESKKFYQIGDSWEKVSNGVSYQCYCYGKGIGEWHCQPLSYPAGTGPV
QVIITESANHPNSHPIQWTAPQQTHIKQYILRWKPKNKQVVWKQATIPGHLNSYTISGLK
PGIVYEGQLVSVLQLGQKEVTRFDFTTTSTTLGSHSESGDTIPLPPLVATSESVTEITSH
SFVVSWVSASDTVSGFRVEYELSEEGEEKRYMDLPNTATSVSIPDLLPGRKYVVNVFEIS
EEGERSLILSTSQTTAPDSPPEYNIEHVDDTSIMVSWTKPQAPITGYRIVYTPTVEGAST
ELILPDTATSVTLTDLFPGVEYNITIYAVEDSQESNPIVIQKETTGTPQQVTIPSPTDLQ
LLDATDMKITISWSSPASEVSGYRVVVTPVRPSGRDIQNLPVSRSTFAEVANLRPGTTYR
FEVYAVSRGQESQPLVGDFATKLDSPTDLKFEDLTESAVLIVWTPSRAKIDRYVLSLSQT
RGGQPNQFDIPSTTTSYKLKSLQPGKEYTVSLVALKGSQQSQPSTGIFSTLEPVGSIPPY
NTEVTETTIIVTWTPVPRIGFKLDVRPSQGGEAPREVISESGSIVISGLTPGVEYTYSIS
VLKDGEESESPITKTVVTPITPPTNLRFLPSPDSITLTIYWDRSTSPGITGYRITSSPTE
RQLGYPTEDDVDASQSSFTFEGLSPGVEYNISVYAVKGDEESVPLSKIITQEIPQLTDLK
FVDVTDTSIDLRWTPLNASTIIGYRITVVAAGESVPVYEEFVHPSQGYYQVSGLEPGIDY
EISVITLINGGESAPTTIVQQTAVPPPTNLRFTNTGPDSMRVTWSSPTSIELSNFLVRYF
PVKRPEDVTELSISRTDNMVVLANLLPFTEYQVNVHSVYEERESTELNGVHRTNLDSPTG
IDFSEITPNSFIVHWNAPRATITGYKVRYQLESGNMRPKEERIPPSRNSITLTNLIPGSE
YVVSIIAVNGVQESLPLVGQQATVSDVPTELEARSTSPNTITVTWDAPAVNVRYYRITSS
ETGGEGPAQEISVPGTSNTATIRDLKPGISYTITVYAVTGRGDSPATSKPITIVHSTGVV
QPTEMQVTDVQDQSIHVRWTPSTGPVTGYRVTSVPKGGHGETISQVLPSDQTEMTIVGLQ
PTVEYVVSVYALGVGGESEPLVETAVTNIDQPKGLAFPEVNVDSIRLSWEIPEGQVTGYR
VTYSSPEDGVRELFPAPEGDDDAAELHGLRPGTEYTVSIVALHDDLESKPVVGIQRTAIP
APTNLQLSQVTPTGLTLSWHAPNVQLTGYRVRVNPKEKTGPMKEFTTAPGTTATTITGLM
VATKYEVNVYAVKDDLMSPPLQGIISTLENVSPPRRPRVTDVTETTITITWRTKTETITG
FLIEALPVGGQTPIQRVIKPDVRTFTVTGLQPGTDYKISLYTLNDNARSSPVTLDVSTAV
DSPSNLRFLSSTPNSLLFSWQPPRSRITGYIIKYERVGGIPKEHLPRLPAGTTEASITNL
EPGVEYIIHVIAVRNNQKSEALIGRKKTDEVPQLVTFPHPIPGPEILDVPSDVEKTPFIT
ETTFDNGNGIKLPGSVGQPSTGHEGQFVEEYFRSQVLPTTALPVRPGQFTPGHVVTVDAR
LHEPTYHEPKGDFEGHYPHGFGPQLNETGIQEVASQTTISWRPLLETTEYVISCHPVGHE
EAPLEFKVPGTSTSATLNGLTRGATYNIIVEALKGVNRHKILEELVTVSNAVVPDGGLPS
VEDTCYDTFTGAHYTVGQEWERVSESGFKLWCKCLGYGSGHFRCDSSKWCHDSGVNHRIG
EKWDRRGENGQMLSCTCLGNGKGEFKCEPHEATCYDEGKLYNVGEQWQKEYLGAICSCTC
YGGQQGWRCDNCRRPGSAVTPDATGHTVSQFTQRYHTNYNVKCPIECFLPLGLQADSHHT
EQTKN
NT seq 7398 nt   +upstreamnt  +downstreamnt
atgccccgggggcccctgaccgggctgctcctcgccctgtgtgtgagcgccgccgtgcaa
gccgccccatcagagaggaccaagagccgcagacaggcgcagcatgccgtgcaaccggtg
ctggccggagacacttctcagagaggctgctttgacaatggaaaaacctataatattggg
cagcaatgggaaaggatttatttgggaaatacactggtctgtacctgctatggcggaatc
cgaggcttcaactgtgaaagtaaaccagaggctgaagaaacctgttttgacaagtacaca
agcaccacttaccgagttggggaaacttacgagcgaccgaaagataacatgatctgggac
tgtacctgcattggagctggaagaggacgaatcagctgcaccattgcaaatcgctgccat
gagggtggacaatcttataagattggggacacttggcgtagggctcatgaaaccggtggt
tatatgttggagtgtgtatgccttggtaacagcaaaggagaatggacctgcaagcctgta
gctgaaagatgttatgataacacagctggcacatcctatgtggttgggcaaacctgggaa
aaaccttaccagggatggatgatggtggattgtacatgtctgggagaaggcagtggacgt
atcacatgttcatctagaaaccgatgtaatgaccaggacacaaggacctcctaccggatt
ggcgatacctggagcaagactgatgctaggggtaacttgctgcagtgtatctgcacaggc
aatgggcgtggcgaatggaagtgtgagaggcattcttctgctaccggagttggtgttgca
tctggtgcccaaataaatatctacccagctgtgcgagatattgagcactgtgttgctgac
agtggagtcctctatactgtgggcatgaaatggctcaaaagtcagggaagtcagcagatg
ctctgcacctgtctgggcaatggtgtcagctgtgaagaaagtgttgccatcgggacttat
ggaggaaattcaaatagtgacccatgtgccttccctttcatccatgatggcaaaacctac
tactactgcacaacagaaggtcgccaagatggagagctctggtgctcaaccacctccaat
tatgatgaggacaagaagtattctttctgtaccgagcagcgtgcaatggttcaaacacgt
ggtggtaattccaatggagctctctgccacttcccattcttgtacaacaatcgtaactac
acagactgcacatcagagggccgccgtgacaatatgaagtggtgcggcactaccttaaac
tacgatgtggaccagaaatttggcttctgccccatggcagctcatgaagaaatttgcaca
accaatgatggtgttatgtatcgtattggtgatcagtgggacaaaatgcatgatcaaggc
cacatgatgaggtgtacttgcgttggcaatggccgtggtgaatggaactgtattgcctat
tcccagctcaaagatcagtgcatcgtggatggtgttacctatgatataaatcaatctttc
accaaatatcacgaggaggggcacgtgatgaactgcacctgctttggtcaaggacgtggt
agatggaagtgcgatgctgtggatcagtgccaggaaacggaatccaaaaaattctaccag
attggtgactcctgggagaaagtttcaaatggtgtcagttaccagtgttactgctatgga
aagggaattggtgaatggcattgccaacctctttcctacccagctggaactggacctgtc
caagtaatcatcactgaaagtgccaaccaccccaactcgcaccccattcaatggactgct
cctcagcagacgcacatcaagcaatatatcctgcgctggaaacctaaaaacaaacaagtt
gtttggaaacaggccaccattccaggacatctgaattcctatacaatttctggtctgaag
cctggaatagtgtatgagggacagcttgtaagtgtcttacaacttggacagaaggaagtc
acccgatttgatttcacaaccacctccaccaccctaggaagtcattctgagtccggagat
accattcctcttccacctctggtggccacttcagagtctgttactgagattacttcacac
agttttgtggtgtcttgggtctctgcatctgacacagtctctggattccgtgtggaatat
gagctcagcgaggagggagaggaaaagcgctacatggacctccccaacactgctacttct
gtcagtatcccagacctgcttccaggacgtaaatacgttgtcaatgtgtttgagatcagt
gaggagggggaaagaagcttaatcttgtccacttctcagacaactgcacccgacagccct
cccgaatacaatattgaacacgttgacgatacatccatcatggtcagctggaccaaacct
caagctcccattactggctacagaattgtctatactccaactgtggaaggagccagcaca
gaactcatcctcccagacactgctacttctgtaaccctcactgacctcttcccaggtgtt
gaatacaatataacaatctatgcagtggaggatagtcaggagagtaatccaattgtcatc
cagaaggaaaccacgggaaccccacaacaagtgactatcccatcacccactgatctgcaa
ctgcttgatgcaactgacatgaagataactatttcatggagctctccagcaagtgaagtg
tctggctaccgtgttgtagtgacaccagttagaccgtccggtcgggatattcaaaacctg
ccagtgagcagaagtacctttgcagaggttgctaacttgcgccctggtaccacctacaga
ttcgaagtttatgcagtcagccgtggacaagagagccagcctcttgtaggagattttgca
accaagttagactctccaactgatttgaagtttgaagacttgactgaatctgcagtcctt
attgtatggacaccttcacgagccaagattgatcgctatgttctttcactgagtcaaacc
cgtggtggtcagcctaaccagtttgatataccctccactacaacaagctataaactgaag
agtctgcagcctggaaaagagtatacagtttctctggttgcactgaaaggaagtcagcag
agtcagccctctacaggaatcttctcaacattggagccagttggatctattcctccatat
aacacagaagttactgagaccaccataattgttacatggacccctgtgccaagaattgga
ttcaagttggatgtacgtcctagccaaggtggtgaagcacccagagaagttatatctgag
tctggaagtatcgtgatctctggccttacaccaggtgttgagtatacctacagcatctct
gttctcaaggatggtgaagagagcgaatcccccatcacaaagacagttgtgactccaatt
acaccaccaacaaaccttcgcttcctgccaagtccagattctatcacactgaccatctac
tgggataggagtacctctccaggaataactgggtacaggataacttcatctcccacagaa
aggcagcttggttatccaacagaagatgatgttgatgcaagccagtcctcttttactttt
gaaggccttagccctggtgtggaatataatatcagtgtttatgcagttaaaggagatgag
gaaagtgtccccctctccaaaataataactcaagagataccccagctcactgacctaaag
tttgtcgatgtaaccgatacaagtattgacctgagatggacaccccttaacgcctccacc
attattggctaccgaatcacggtggttgccgcaggagagtctgtccctgtctacgaggag
tttgtgcacccttcacaggggtattaccaggtctcaggattggagcccggcattgattat
gagatcagcgtgataacactcattaacggtggagagagcgccccgaccacaatcgtacag
caaacggctgttccacccccaacaaacttgcgcttcaccaatactggtcctgattcaatg
cgtgtcacttggtcttccccaacttccattgagctgtctaacttccttgtacgctatttc
cctgtcaagagacctgaggatgttactgaattatccatctctcgaactgataacatggtt
gtgctagcaaatcttcttccatttacggaatatcaagtcaatgttcattcagtctatgaa
gaaagggaaagtactgaacttaatggagtacatagaacaaaccttgattcaccaactggt
attgacttttctgaaatcaccccaaactcctttattgtacactggaatgccccccgtgct
actattactgggtataaagttcgataccagctggaaagtgggaatatgcgtcccaaagaa
gagagaattcctccatcccgaaactccatcactcttaccaaccttattccaggctctgag
tatgttgtcagtattattgctgtcaacggtgtccaggaaagcttgccacttgtaggccaa
caagctacagtgtctgatgtaccaactgagctagaagcaaggtctacttctcccaataca
attacagttacttgggatgcacctgcagtcaatgtacgatactatagaattacttcatcg
gagactggaggtgaaggaccagctcaggaaatctcagtgcctggcacttctaacactgca
acaatcagagacctaaaaccaggcataagttacactattactgtgtatgctgtcactggc
cgaggggacagtcctgccacaagcaagccaatcacaattgttcattcaacaggtgttgtg
caaccaacagagatgcaagtgacggatgtccaagaccaaagcatccatgttagatggaca
ccatctactggcccagttactggttatagggttacaagtgtacctaaaggtggtcatgga
gagaccatttcccaagttttaccatccgatcaaaccgaaatgacgattgtggggcttcaa
ccaactgttgagtatgtggtgagcgtgtatgccctgggtgttggcggagagagtgagcct
ctagttgaaaccgctgtcacaaacattgatcaacccaaaggactggcatttccagaagtg
aatgtagattcaattagactatcctgggaaatcccagaagggcaggttactggttaccga
gtgacctactcaagccctgaggatggagtccgagagttgtttccagctccagaaggagat
gacgacgctgctgaattgcacggtctcaggccgggcacagagtacactgtaagcatcgtg
gcattgcacgatgacctggaaagcaagcccgtggttggaatccagcgtacagccattcct
gccccaacaaatcttcagctctcccaagtgactccaactggccttactcttagctggcat
gcacctaatgttcagcttactggataccgggtacgtgtgaatcccaaagagaaaactgga
ccaatgaaagagtttaccacggcacctggtacgactgccactactattacgggtctgatg
gttgccaccaagtatgaagttaatgtatatgctgttaaggatgatctgatgagtccccca
ctgcaaggcatcatctctacactggagaatgttagcccccctcgccgtccacgtgtcaca
gatgttacagaaacgacaataaccattacctggcgcacaaagactgaaaccattactggc
ttcttgattgaggctcttcctgttggtggccagactcccattcagagagtaatcaaacca
gatgtgagaaccttcacagtcacaggtcttcagcctggaacagactacaagatctctctg
tatactttaaatgacaatgcccgcagctcccctgtcacactggatgtgtcaacagctgtt
gatagtccatccaacttgcgattcctgtccagcacacccaactccctgctcttctcctgg
cagcctccccgttctcgcatcacggggtacatcattaagtatgaacgagtaggaggaata
cctaaggaacatctgccccgccttcccgcaggaaccactgaggcctctataaccaaccta
gagcctggtgtagaatacattattcatgtaattgctgtgagaaataaccagaagagtgag
gctctgattggtcgcaagaagacagatgaggttccccaactggtaacattccctcacccc
atccctggccctgaaatccttgacgtcccttcggatgtagagaaaacacctttcatcact
gagacaacctttgacaatggtaatggtatcaaacttccaggctccgtcggacaacccagc
actggccatgaaggacaatttgttgaagaatacttcagaagtcaggttttgcccaccacc
gctctacctgtgagacctgggcaattcactcctggtcatgttgttacagtggatgcacgc
cttcatgagcccacctaccatgagcctaagggagattttgaagggcattacccgcacggc
tttgggccacaactcaatgaaactggcatacaggaagtggcatctcaaactaccatttcg
tggagaccccttttggagactactgaatacgtcatctcatgccatcccgtgggtcatgag
gaagcccctcttgagttcaaggtccctggcacctcaactagtgctactcttaatggcctc
acccgtggagccacatataatatcattgtggaggccctgaaaggtgttaatagacataag
attctggaggagctggtaacagtcagcaatgctgttgttcctgatgggggtctaccatca
gtagaggacacctgttatgacactttcactggagcacattacacagttggacaggagtgg
gagcgcgtttcagaatctggatttaaactttggtgcaaatgtttaggatatggtagtggg
cacttccgatgtgactcatcaaaatggtgccatgacagtggagttaaccatagaattggt
gagaagtgggatcgtcggggagagaatgggcagatgctaagctgcacttgtcttggaaat
ggaaagggagagttcaagtgtgaaccacatgaggctacatgctatgatgaaggcaaactc
tacaatgttggggagcaatggcagaaagagtacctgggagccatctgttcatgcacatgc
tatggaggacagcagggttggcgctgtgataactgccgacggccaggatctgctgttact
ccagatgccaccggacacacagtctcccagttcacgcagcggtatcatacaaactataat
gtgaaatgtcccattgagtgcttccttcctttgggccttcaagcagattcacatcatact
gaacagaccaagaactaa

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