Rana temporaria (common frog): 120943908
Help
Entry
120943908 CDS
T07929
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120943908 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120943908 (HDAC4)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120943908 (HDAC4)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120943908 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
120943908
NCBI-ProteinID:
XP_040213510
LinkDB
All DBs
Position
6:complement(150465979..150760526)
Genome browser
AA seq
1065 aa
AA seq
DB search
MSSQTHPDGISGRDQPVELITQTRAKHMPSTVDVTAALPLQVASGTLPMDLRLDPQYTIP
GADSGREQQLQQELIALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHDHVKQQQELLAM
KHQQELLEHQRKLEQHRQEQEMEKQHREQKLLQLKNKEKGKESAVASTEVKMKLQEFVLN
KKKALAHRSLNHCMSNDPRFWKTQHSSLDQSPPPQGGVSGSYHHPVLGMYDSKDDFPLRK
TASEPNLKLRSRLKQKVAERRSSPLLRRKDGPGVTSLKKRPMDVSDSACNSAPGSGPSSP
NNSSSNITTENGIAGTLGMQAEAALAHRLMNREGSVTQLPLYTSPSLPNITLGLPATGSS
NGASGQETERISLSTIQQRLSLFPASHLTPYLGSDAATSHNSLLQHMVMLEQPNSQSQLV
SGLGALPLHSQSLVSTDRVSPTIHKLRQHRPLGRTQSAPLPQNSHALQHLVIQQQHQQFL
EKHKQQFQQQQIHLNKMIPKVNEVSRQHESHPEETEEELREHQALHEEPYVEHALNLKEQ
SLGSIVHVKQEREESEDESNAHELEHNQLQTEQDLLFRQQTLLLEQQRIHQLRNYQASIE
AAGLVMPFSGHRPLSRAQSSPASASFPMSVQETPTKPRFTTGLVYDTLMLKHQCICGNTN
IHPEHAGRIQSIWSRLQETGLRSMCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKL
EGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELASKVVAGELKNGFAVVR
PPGHHAEESTPMGFCYFNSVAVTAKLIQQRFNVEKTLIVDWDVHHGNGTQQAFYSDPSVL
YISLHRYDDGNFFPGSGAPDEVGSSAGLGFNVNVAFTGGVDPPMGDAEYLAAFRTVVLPI
AREFSPDVVLVSAGFDAVEGHPSPLGGYNVSAKCFGYLTKQLMELASGRVVLALEGGHDL
TAICDASESCVSALLGNELEPISESLLQQRPNSNAVNSLEKVIQIQSEYWPCLHNAASTI
SYSLVEAQKCESEEAETVTAMASLSVGVHPERRTEDEPMDEEPPL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccagactcacccagatggaatatctggtcgggaccaaccagtggagcttata
acgcagactcgtgccaaacacatgccaagcactgttgatgttactgctgcgctgccactt
caggtggcttctggcacccttcctatggaccttcggctggatccccagtatactatacca
ggagctgacagtgggagggagcaacaactgcagcaagaactaatagcactaaagcaaaag
cagcaaatacagcggcagatccttatagcagagtttcagaggcagcatgaacagctgtca
agacaacatgaagcccagctacatgaccatgtaaagcaacaacaagaactcctggccatg
aaacatcaacaggagcttttggaacaccaaagaaagctggaacagcatcggcaggagcaa
gaaatggagaaacaacacagggaacagaaactgttacaactgaagaataaggaaaaggga
aaagaaagtgctgtagcaagcactgaagttaaaatgaagttacaagagtttgtcctgaac
aagaagaaagcccttgctcatcgtagcctaaatcattgcatgtctaatgaccctcgcttc
tggaaaactcagcatagctctctggaccagagtccaccacctcagggaggggtatctggt
tcataccaccatcctgtcttgggaatgtatgactcaaaggatgacttccccctaagaaag
acagcatctgagcccaatctcaagttgcgttccagactgaagcagaaggttgcagaacgc
agaagcagccctctcctaagaaggaaagatggtcctggtgtgacttctctgaagaagcgt
cctatggatgtgtctgactctgcttgcaatagtgcacctggttccggccctagttccccc
aacaacagctcaagcaacattaccactgagaatggcattgctggtactttgggcatgcag
gcagaggctgctctggcccatagattgatgaacagggagggctctgtgacccagctccct
ctctatacctcaccctctttacccaacataactctgggactgcctgccactggatcttct
aatggtgcatctggacaagagactgaacgcatttccctttctacaatccagcagcgactc
tctttgtttcctgcttctcacctcactccttaccttggttctgatgcagcgacctctcat
aattcgcttctgcagcatatggtcatgctagagcagcccaattcacagagtcagttagtt
tcagggttgggagcactccctcttcattcccagtctttagtgtccactgatcgggtatct
cctacaatccacaagttacgtcagcaccgcccattgggccggacacagtctgcacctctg
cctcagaactctcatgccctgcaacacttggtcattcagcagcagcaccagcagttcctt
gagaagcacaaacagcagtttcagcagcagcagatacatctcaataagatgattcctaaa
gtaaatgaggtttcaagacagcatgaaagccatcctgaggagactgaggaagaactgcgt
gagcaccaagcattacatgaagagccatatgtagaacatgcattaaatctcaaggagcaa
agccttggcagtattgtgcatgtgaagcaggagagagaagagagtgaggatgagtcaaat
gcacatgagctggagcataatcaattacagactgagcaagatctgttgttcagacagcaa
acactactacttgaacagcaacgaattcatcagctgaggaactatcaggcctccattgaa
gctgctggattagttatgccttttagtgggcacagacctctgtcaagggcacagtcttca
ccagcctctgcctcatttccaatgtccgttcaggaaactcccactaagcccaggttcact
acaggtcttgtgtatgacaccttgatgctcaaacatcagtgtatctgtggaaacacaaat
attcatccagagcatgctggacgcattcaaagcatctggtccaggttgcaagagactggt
ttgaggagcatgtgtgagtgtatacgcggcagaaaagccactttagaggagttgcagact
gtccactctgaggctcatactctgctctatggcacaaaccctttgaatcgacaaaaactg
gaggggtctttgacctctatgtttgtgcgtctcccatgtggcggagttggggtcgacagt
gacacaatttggaatgaagtacattcttctggggctgcccgcctagctgtggggtgtgta
gtggaacttgcctcaaaggttgtggcaggagagctaaagaatggctttgctgtagtccgc
cctcctggacaccatgctgaagagagcacacctatgggtttctgttacttcaactctgtc
gcagttacagccaagctcatccaacaaagatttaatgtggagaagacgttaatcgtggat
tgggatgtgcatcatggaaatgggacccagcaggctttctatagtgatccttctgttcta
tatatatcgcttcaccgctatgatgatggaaacttctttccaggaagtggtgctcctgat
gaggttggaagcagtgctggtttgggttttaatgtaaatgttgcttttacgggaggagtg
gacccacccatgggagatgcagagtacctggctgcattcagaactgtggtgctaccaata
gcacgtgagttttctccagatgttgtcttggtgtctgctgggtttgatgccgtggaagga
catccatcaccactgggaggatataacgtatcagccaaatgttttggatatctgacaaag
cagcttatggagctggctagtggtcgtgttgttctggcacttgagggaggtcatgattta
acagcgatttgtgatgcttctgaatcttgcgtatctgctctactaggtaacgagctagag
ccgatttcagagtctctgttacaacagagaccgaatagcaatgcagtgaactctttggag
aaagttattcaaatacaaagtgaatactggccatgtttgcataatgcagcttctacaatc
tcctattctctcgtcgaggcacagaaatgtgagagtgaagaagctgaaacggtgacagcg
atggcgtccctgtctgtgggcgtccatccagagagaagaacggaggatgagcccatggat
gaagaaccccctctgtag
DBGET
integrated database retrieval system
