Rana temporaria (common frog): 120943921
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Entry
120943921 CDS
T07929
Symbol
LSS
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00100
Steroid biosynthesis
rtem01100
Metabolic pathways
Module
rtem_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120943921 (LSS)
Enzymes [BR:
rtem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
120943921 (LSS)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-GeneID:
120943921
NCBI-ProteinID:
XP_040213532
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All DBs
Position
6:151395901..151452054
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AA seq
733 aa
AA seq
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MSVGTCLRRRGGPYKTEPATDLTRWRLNCKEGRQTWSYVEEEDRPQNVLEAHSVGLTTSE
FLKELPKALTAQDGAENGMTFYSALQAEDGHWAGDYGGPLFLMPGLLIACHVTQTSLPEA
TKKEMVRYLRSVQLPDGGWGLHVEDKSTVFGTALSYTSLRLLGVSQDDPDLTRARNNLHS
KGGAIGIPSWGKFWLAVLNVYSWEGLNTLFPEMWLLPQWFPAHPSTIWCHCRQVYLPMSY
CYATRLSSCEDDLIRSLRQELYVQDYNSINWPAQRNNVAPCDLYTPHSTLLNVAYVLLNI
YESYHIPSLRRRAVHELYDHITADDRFTKCISIGPISKVINMLVRWHVDGSESPVFKEHV
DRIPDYLWLGLDGMKMQGTNGSQLWDTAFAIQAYLEAGAHKKKQFQKVLEKAHEFLRISQ
ISDNPPEYKKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSAMLLQENCSFLSDHIPRDR
LRQAVDVLLSMRNSDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAAMQALK
HYQAWDPDYQTQEIRETLQRGLDYCRSVQREDGSWEGSWGVCFTYGIWFGLEAFACMGYK
FSDECPEIRKACDFLLSHQMKDGGWGEDFESCEERRYVQSADSQIHNTCWALMGLMAVGF
PDVSVLERGIKLLLEKQLSNGDWPQENISGVFNKSCAISYTSYRNVFPIWTLGRFSRLHP
NSPLAGIHKARYG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggggacgtgcctgcggagaagggggggcccttataagactgagccagcaaca
gatctcacacgctggcgcctcaattgcaaagagggcaggcaaacctggagctatgtggaa
gaagaagaccgaccacaaaatgtgctggaggcacattctgtaggactgactacgagtgag
tttctgaaggaattgccaaaggcccttacagcccaggatggagctgaaaatggaatgaca
ttttattctgctttacaagctgaagatggtcattgggctggtgactatggaggacctctt
ttcttaatgccaggtctcttgattgcatgtcatgtaactcaaacttcacttcctgaggca
acaaagaaggagatggtgcgctacctccgctctgtgcagcttccagatggtggatggggc
ctgcatgttgaagataaaagcacagtctttggcacagcgctcagttatacctccttacgt
ctgctgggagtttcacaggatgacccagatctgacccgggccaggaacaatcttcacagt
aaaggtggtgccattggaattccatcatggggaaagttctggctggcggtgctcaatgtc
tacagctgggaggggctgaatacattgtttccagagatgtggcttttgccacagtggttt
ccagctcaccccagcactatatggtgtcactgcaggcaagtctaccttcccatgagttat
tgttatgccacaaggctgagttcctgtgaggatgacttgatccgcagcttgagacaagaa
ctctatgtgcaagactacaacagcattaattggccagcacagagaaataatgttgcccct
tgtgatctgtacaccccccacagtacactgctaaatgttgcttatgttctactgaatata
tatgaatcgtaccacattccttccctccgccgtcgcgcagtacatgaactatatgaccac
attacagctgatgaccgcttcactaaatgtatcagcattggtccaatctcaaaggtgatt
aatatgctagttcgatggcatgtggatggatcagagtctcctgtattcaaggagcatgta
gaccgcataccagattatctttggttgggtctggatggaatgaaaatgcagggaacaaat
ggctctcagctgtgggacactgcatttgctatacaggcatacctggaggctggagctcac
aaaaagaagcagtttcagaaagtgttggagaaagcacatgaatttttgcgtatttcacag
atatcagataatcctccagagtataaaaaatactacagacaaatgaacaagggagggttt
ccattcagcactcgtgactgcggttggattgtggcagattgtacagctgaaggtctaaaa
tctgccatgctgctccaggaaaactgctcttttctatctgatcacattccaagggacaga
ttacgacaggctgtagatgtgcttcttagcatgagaaattctgatgggggatttgctaca
tatgaaacaaaacgtggtggccgcctgcttgaactgctgaatccctctgaagtgtttggg
gacatcatgattgattacacgtatgtagagtgcacatctgctgcgatgcaagccttgaaa
cattatcaagcctgggatcctgactaccaaacgcaagaaatcagagagactcttcagcgt
gggcttgattattgtcgttccgtacagagagaagatggctcctgggaagggtcatggggt
gtttgctttacatacggcatttggtttggactggaagcctttgcttgcatgggatataaa
ttctctgatgagtgcccagagatcagaaaggcatgtgattttctgctgtcacatcaaatg
aaggatgggggctggggagaagattttgagtcctgcgaagagagaagatatgttcagagt
gcagactctcaaatacacaatacatgctgggctctgatgggactaatggccgtagggttc
ccagatgtcagtgttttggaaagaggaattaaactgctcctggaaaagcaactcagtaat
ggagactggcctcaggagaatatatcaggtgtgtttaacaagagctgtgctatcagctac
acctcatatcgaaatgttttcccaatatggacgctggggcgtttttctcgtcttcatcca
aacagccctctggctggcatccataaggccagatacggctga
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