Rana temporaria (common frog): 120943922
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Entry
120943922 CDS
T07929
Name
(RefSeq) germinal-center associated nuclear protein
KO
K24317
germinal-center associated nuclear protein [EC:
2.3.1.48
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120943922
03036 Chromosome and associated proteins [BR:
rtem03036
]
120943922
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
120943922
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
120943922
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
120943922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM3AP_GANP
SAC3_GANP
CID_GANP
RRM_1
RRM_PARP14_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120943922
NCBI-ProteinID:
XP_040213533
LinkDB
All DBs
Position
6:151466163..151537767
Genome browser
AA seq
2351 aa
AA seq
DB search
MNSNNPFGGPQNTGNASQSAALFGQTSVFGQSAGGLSGPSFGQSSSMFGQLGTTSQAAPV
FGQSTPSQNPAFGQTTVAQPIPSFGQTNSGFSSPMFGQASTGQSAPAFGQSGPVFGQTTS
EQPGPIFGQANSGQSGSMFAQDSSGQSGSAFSQATSGQSGSLFGQATSGQPVSAFGQVTS
GQSGSVFGQVASGQSTAIFGQDNSGHAAPTFGQTAPAFGQGNTGPSASPFGQTSTTQPSS
AFVQPGPTFGHSNSNQTPLFGQGASSQSASPFAQVTTSQSNPLFAQQGNNQSTLFSQSNI
NQAASPFAQTVSSQSSTPFGSSGPVFGQAASGSSVYEQLSKQSQGESSQGSVFGQSVSGT
TFAFSQPASAQNPLFGQNTSGQSLGQSSSTQLRPDGSNQNVAFGQTTTDQNNLFNQTPKF
GQPPSAQSSKFGTVSTTQTGRNNTFGETGEKISIFGPPPSTATSEQTKSIGLAFGGATQM
TTNSNVPESKVSTSMASSPFAQMSSIASSNTAFKPIFAGAGQTQEASEKPLFGKLSAAAS
SGERQKSSLFSFSTENKLKDESGPFRPPFASADSSFTSFNEEVERQETHKALKQKEDPGH
STGKHEYAPSDNTPPDLHREDPSGRRSTRMNREIKASANILYKSLFDALKSQMKSQQKES
KKKDTDSKLPDPDTASSQTAARNHPTSESRQHGLAKPQVQAVPIQPPPYKPPPPAGPGTP
SRTVTVVGPNFQSPGRDSSVAGPSQLLPGRIRPLMELVMPQTPPSPTKTPLRRTKRSDST
DSIGPLSPNEQTCIQLKNLPPHLNKKQALEAFFKKFGKIQRTYCKPGNTTAIIHFAQHKA
AANAKKAVKKFHANVSVFWYRKKSSPGKTPLPKIENREEERKEMQSEQESNVLASPVRKP
IFRTIKGSPQKKSQFAKTLQFDVDNTDAPTTSSDSAIPSLPPSLLLLVGTVAETPEEKYR
LLDQRDRILRQVRVKRTELDQANVFVGTCQDMCPEKERYMRETRNQLSIFEILPGSDKID
HATAIKEYSRSSADQEEPLPHELRPLPVLCMTMDYLVTYIMDNGENNYRDWYDFVWNRTR
GIRKDITQQHLCDPVTVSLMEKCMRFHIHCAYELCEEPMSAFEPKINNENLTKCLQSLKE
MYQDLHNRGETCPCEPEFRGYSVLLNLNKGDILREVQQFQESVRNSAEVKFALQVFSAFN
STNYVRFFKLVRSSSYLNSCILHGYFGQIRRRALQVMNIAYTFSPQRPTLFPLEEVVRLL
LFQDADQATGFLTAYGLSVSDGFVEINRSAFAEPEAPLLPKKSPLISHKCNVSVGQVVNG
ATLPTIPLHTPVCSFDAQNRYTGFTNSTEIVVKSGPEPTVIIDKPEVKDSVPEDRPIKRT
IVLLKDDQESSSIPCQSVFQPIVPPEVPPSPPKPAFTDVDVAAVLLDIVEETVKEFSVEI
GQTGAAYISAALGESSLVADRLLAEVILDLSSTITKEEMKAQTERVLEEKRRKAEEARRI
HEREQLLSEISQYECDSLLKIVLQENIKKISSEELQKAIQKDHNERISRCSLHISQQFVD
QFVKEELDQIANETLYEMQLCRKYFQRWREVLGARKKLRRQMRGFPAAPGLMGYSGTLKA
LIPSAMQNFQTQPKGIVNLGNAGKLFVSFISPQQRTEQILHTMKVQHFFQELLCDAAWTP
LELPSLIANSLPSWKNCIFWKVVLALPETSQPDDLNSVLSKWLQAKFCWAGIQPADAQKQ
QLQTLALYNSLVSQEGFPVSLNVCVKAVHGPLADSELDKAESQNELWGTNSLVFLLPFTY
EKTEEYWISAILQLKQLLNCKPFWPAPSLAVLVPGSSNEEKNIEEELGLQDLVSCELISD
YIVLSIPETVTNMKGTEVVTSAVQFLLSHCPRSPQLHALPFRQYIEDGVYHAFSDPFYYD
MSNRRKFGLPSQDPAAIIDLYNGAIAYLAKVVSSSRLVELSWPLTEFTSSRGSFVMPPMD
WNSLEHLSWLKKAVLSFQIPEMDKPPEGAPWQPVCSMIKGYVSQISKSSEALPVLNSEVQ
MLLGGVWDHCLENGESEGSDSELFVHEIPWDDLIALCINHKLRDWNPPFNEHVKGSLEDL
YVYFFEKDLENFKLPESWLKACHTTDKDLLMPSDSSSCRRKRKLQPSQTAQSFLTREENT
QKDVKNLMSLHSHLSQFLLEEENESSSSKKRSVLVPSQPLESSFVAHMENAQTDLDRLKS
LQSQLNQALLAEKQESEKFNEKLQHLLEEEPLDVSLSLPLYLPNTSLQGALENATVVRSQ
HKPSTDGTLHSNSQSASLMSDVHSHSSLRDLMNSLHTSIRRYKDEDIAFDLHMSNLLDVA
EMSSSPNETNM
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgaattctaataatccatttggaggacctcaaaacactggtaatgccagtcagagtgct
gcattgtttggacagacatctgtatttggccagagtgctggtggactttctggcccttca
tttggacagtcttcatccatgtttggtcaactcggtactacaagtcaggctgctcctgtg
tttggtcaaagtactcctagccagaaccctgcgtttggacagactactgtggcacagcct
attccatcatttggccagacaaacagtggtttttcttcgcctatgtttggtcaggcatcc
acaggacaatcagcccctgcatttggacagtctggtcctgtatttggacagaccacatct
gagcagcctggtcccatatttgggcaggccaactctggacagtcaggatctatgtttgca
caagacagctctggacagtctggatctgcattttcccaggctacttctggacaatctgga
tctctatttgggcaggccacctccgggcagcctgtgtctgcatttggtcaggtcacttcg
ggacagtctggatctgtatttgggcaggttgcttctggacagtccacagctatatttggg
caggacaattcgggacatgcggcacctacatttggacagacagccccagcatttggacaa
ggaaatactggaccatctgcttccccttttggacagacatccactacccaaccttcttct
gcatttgtgcagccaggtcctacatttgggcattcaaattctaaccaaacacctctgttt
ggacagggtgctagtagccagtcagcatccccctttgcacaagtaacaactagtcagtct
aatccactttttgctcagcaaggtaacaaccagtccactttgttttctcagtccaatatt
aaccaggcagcttccccatttgcacagaccgtttctagccagtcgtctacaccctttgga
agtagtggcccagtatttggacaggcagcttcgggatcttctgtgtatgaacagttgagt
aaacagtctcaaggggaatcaagtcaaggttcagtttttggacagtcagtgtctggcacg
acctttgcttttagccagccagcttctgcacagaatcctttgtttgggcagaacacatct
gggcaaagtttgggccagtcatcatccacccaattaagaccagatggatcaaatcaaaat
gttgcttttggacagacaactactgatcagaataacttgttcaaccaaacacctaaattt
ggacagcctccctccgctcagtcttctaaatttgggactgtatccactacacaaactggt
agaaataatacatttggagaaacaggtgaaaaaatttcaatctttggtccaccgccaagt
actgccacctctgaacagactaaaagtattggtctagcctttggtggagctactcaaatg
actaccaattctaatgttccagaatccaaagtgtcaactagcatggcttcctcccccttt
gcacaaatgtctagtatagcctcatccaatacagctttcaaaccaatctttgcaggtgct
ggtcaaactcaggaagcatcggaaaagcctttatttgggaaactttctgcagcagcttca
tcaggggaaaggcagaagagcagcttattctctttctctacagaaaataaactcaaagat
gaatctgggccttttaggcctccatttgcaagcgctgatagtagtttcaccagttttaat
gaggaggttgaaagacaggagacacataaggcattgaagcaaaaggaagacccaggccac
tctactggcaaacacgagtatgccccctcagacaatactcctcccgatctgcatcgtgaa
gacccttcaggaaggaggtctacccgaatgaatagagagataaaagcaagtgctaatatt
ttgtataaaagcttgtttgatgctttaaaaagtcaaatgaaatcccaacaaaaggagtcc
aaaaaaaaagatacagattctaagttgccagatccggacacagcatcaagtcagacagct
gcaagaaatcatccaacatctgaatctaggcagcatggattggctaaaccccaagtacaa
gctgtacccattcagcccccaccgtacaagcctcctccccctgctggcccgggaacaccg
agcaggacagttacagttgttggaccaaacttccaaagccctggcagagacagttctgtg
gctggacctagtcaactattacctggcagaattcgacctttgatggaactagtgatgcct
caaactccaccttcccctactaagacgccattacgcagaactaagcgcagtgacagcact
gatagtatcggaccactgtctccgaatgaacaaacttgcatccagttaaagaatctcccc
ccgcatctaaataagaaacaggctttggaagcattctttaagaagtttggtaaaattcag
cggacgtattgcaagcctgggaacacaacggcgattattcactttgcccagcataaagca
gcagcaaatgccaagaaagcagtaaagaaattccacgcaaacgtctctgtgttttggtat
cgaaagaagtccagtccgggcaagacaccactgcctaagatagaaaatcgggaggaggaa
agaaaagaaatgcagagtgaacaagagagcaatgtgcttgcttcccctgtgcgcaagcct
attttccgtacaattaagggatctcctcaaaagaaatctcagtttgcgaagactcttcag
tttgatgttgataatacagatgccccaacaacatcttctgactctgcaattccatctctg
ccaccttcacttttgcttcttgtgggaactgtggcagaaactcctgaagaaaagtatcgc
ctgctggaccagagggacagaatcttgcgacaagttcgagtgaagaggacagagcttgat
caagcaaacgtgtttgtaggaacctgtcaagatatgtgccctgaaaaggaaagatacatg
agggagacgcgcaaccagcttagcatctttgaaattcttccaggatctgacaagattgac
cacgctacagccattaaagagtatagtcgttcttcagctgatcaggaggaaccactcccc
catgaactccgccctttgcctgtgctgtgcatgacaatggattatctggttacttatatc
atggataatggggagaacaattacagagattggtatgattttgtttggaaccgaacacga
ggaattcgaaaggacatcacacagcagcacttgtgcgaccctgtgactgtatctctaatg
gaaaagtgtatgcgatttcacatccactgtgcatatgagctatgtgaagagcctatgtca
gcctttgaaccaaagatcaacaatgagaacttaacaaaatgtctgcagagcttgaaggag
atgtaccaagacctgcataatcgtggggagacttgtccttgtgagccagagttcaggggt
tacagtgtcctcctcaacctaaacaagggagatattctcagagaagtgcagcagttccag
gagtctgttcgtaactcagcggaagtgaaatttgctctacaggtcttctctgcattcaac
agcacaaactatgtgcgtttcttcaaactggtccgctcttcatcatatcttaacagctgt
atattgcatggatactttggccagatacgtcgaagggctctgcaggttatgaatattgct
tatacatttagtccccagaggcccaccttatttccattagaggaagttgtacgtcttctg
ttattccaagatgctgatcaagctactggattcctcacagcttatggcttaagtgtgtca
gatggctttgtagagataaaccgatcggcttttgctgagcctgaggctcccttactgcca
aagaagagtccattgatcagccacaaatgtaatgtatctgtgggacaagtggtaaatgga
gccacgctaccaacaatccctttgcacacacctgtgtgtagctttgacgcacagaacaga
tatacaggatttaccaactcaacagaaatagtagttaaatcgggaccagaaccaacagtt
attatagataaaccagaggtcaaagactcggtccctgaagataggcctatcaaacgtacg
attgtgcttctaaaagacgaccaggaatcctcatccattccttgtcaatcagtcttccag
cccatagtgccacctgaggtccctccatccccacccaagccagcttttactgatgtggat
gttgctgccgtgctgcttgatattgtggaagagacagtgaaagaatttagtgtggaaatc
ggccagacaggagctgcttacatttctgctgcacttggagagtcatcattggtggctgac
cggcttcttgcagaagtaatcttggatttgtcaagcactattacaaaagaagagatgaaa
gcacagactgagagagtgttggaggaaaaacgaagaaaggcagaggaagccaggcgaatt
catgaaagggagcagttgctttctgagatcagtcagtatgagtgtgacagtctgttaaaa
atagtgcttcaggaaaacatcaaaaaaatatcaagtgaagagctgcagaaagccatacaa
aaagatcacaatgaacgcattagccgatgctctctacatatcagtcagcagtttgtggat
cagtttgtgaaagaagaactcgaccaaatagccaatgaaacgctctatgagatgcagctc
tgccggaaatacttccagaggtggcgggaagttttgggtgctcggaagaaactaaggcgt
caaatgcgaggatttccagctgctcctggtttaatgggctatagtggtacactgaaggca
ttgattcccagtgctatgcaaaatttccaaactcagcccaaagggattgtgaatttgggg
aatgcagggaaactgtttgtttctttcattagcccacagcagcgcacagaacagattcta
cacacaatgaaagtccagcatttctttcaagagctgctttgtgatgctgcatggacgccg
ctggagctgccatctttgattgcaaacagcctgccttcatggaaaaactgcatattctgg
aaagtagttctggctctgccagaaacaagtcagcctgatgatcttaacagtgttctgtct
aagtggttgcaggcaaagttctgctgggcaggaattcagccggcagatgcccagaagcag
caacttcaaacactagcactctacaactcattagtgtcacaggaaggattccccgtgtct
ttaaatgtttgtgtaaaggcagtacatggacctcttgcagactctgagctagacaaagct
gaaagtcagaatgagttatggggaaccaacagccttgtttttctcttgccttttacatat
gaaaaaactgaagagtactggatttcggcaatcttgcaactaaagcagctcctgaattgt
aagcccttttggccagcaccaagccttgctgtgctggtgccaggatcttcaaatgaagag
aaaaatatagaggaagaacttggcctccaggacctagtgtcatgtgaactcatctcagat
tacatagttctgtcgataccagaaactgtgactaacatgaaaggaactgaagtggtaact
tctgctgtacagttcttgctttcccattgtccccgctctccgcagctacatgcacttcca
ttccgacagtatatagaggatggcgtatatcatgcattcagcgatcctttctactatgac
atgtcaaaccgtagaaagtttggccttccctctcaggaccctgcagcgatcattgattta
tataacggcgccattgcctatctggcaaaggtagtctcatcaagccgacttgtggaattg
tcctggcctttgaccgagttcacatcttcaaggggaagctttgtcatgccacctatggac
tggaacagcctagaacacctttcttggctaaagaaagctgtactttcctttcaaattcca
gaaatggacaagcctccagagggagctccctggcaacctgtgtgttccatgattaagggt
tatgtatctcagatctccaaatcttcagaggctttgcctgtgttgaactctgaagtacag
atgcttcttggaggtgtttgggaccattgtctggaaaatggtgaaagtgaagggtcagac
tctgagctatttgtacatgaaatcccttgggatgacttaattgctctttgcatcaatcac
aagttgagagactggaatcctccttttaatgaacatgttaaaggttccctggaggacctt
tatgtttatttctttgaaaaggatttggaaaatttcaaattgccagaatcatggctgaag
gcttgtcacactacagataaagatttactgatgcccagtgatagttcatcatgcagaagg
aaacgtaaactgcagccatctcaaacagcacagtcttttcttacccgtgaagaaaatact
caaaaagatgttaaaaacttgatgtctcttcattcgcatctcagtcagtttctgctggag
gaggagaatgaaagttcttcaagcaaaaagaggagtgtgttggtgccatctcagcctttg
gagtcttcctttgtggcacatatggaaaatgcacagacggatttagaccgcctcaagtct
cttcagtcacaactgaaccaggccttgttggcagagaaacaggaatctgaaaaattcaat
gaaaagctacaacacctgcttgaagaagaacctctagatgtatcccttagccttcctttg
tatcttcccaacacatctttacaaggggctctagaaaatgctacagtagttcgttctcag
cataagccttcaacagacgggaccctgcattccaattcccaatcagcttccttgatgagt
gatgtacattctcactcatctcttagagatctcatgaacagcttgcacacaagcataaga
aggtataaagatgaagatattgctttcgatttgcacatgagcaacctgcttgatgtggca
gagatgagcagctctccaaatgaaaccaacatgtag
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integrated database retrieval system
