Rana temporaria (common frog): 120944137
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Entry
120944137 CDS
T07929
Symbol
SPOPL
Name
(RefSeq) speckle-type POZ protein-like
KO
K10523
speckle-type POZ protein
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120944137 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120944137 (SPOPL)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120944137 (SPOPL)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120944137
NCBI-ProteinID:
XP_040213980
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Position
6:complement(197310579..197353281)
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AA seq
393 aa
AA seq
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MSVGSTAPPSAPVAAGGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSS
GPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMES
QRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNMSGQFSNNNL
KVPECRLAEDLGHLWETTRFTDCSLYVGGQEFKAHKSILAARSPVFSAMFEHEMEENKKN
RVDIHDVEPEVFKEILRFMYTGKAPNLDKMADNLMAAADKYALERLKILCEEALCSSLSA
ENVADVLILADLHSAEQLKAQAIDFINRCSLLRQLGCKDGKNWNGSQATDIMETAGWKSM
IQSHPHLVAEAFRALASAQCPPFGIPRKRLKQS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgggtccacagcgcccccctccgctccggtggcggccggaggacctgtggct
gagagctggtgttacacccaggttaaagtagtgaagttttcctatatgtggaccataaat
aattttagtttttgccgagaagaaatgggagaagttttaaaaagttctactttctcttcg
gggccaaatgataagatgaaatggtgtttgcgggtgaaccccaaagggctggatgatgag
agcaaggattacctatctttatacctgctactggttagctgtccgaagagtgaagttcga
gcaaagtttaaattttctctattaaatgcaaaaagggaagaaacaaaagccatggaaagt
caaagagcttaccggtttgttcaaggcaaagactggggctttaagaaatttattcggcga
gattttttacttgacgaagctaatggtctcttaccggatgataaacttaccttgttctgt
gaggtgagtgtggttcaggattctgtgaacatgtcaggccagttcagcaacaataacttg
aaggttccagaatgtcgtctggcggaagacttggggcatctctgggagacgacccgattc
acagattgcagcctctatgtaggaggtcaggaatttaaagctcataaatctatcctagca
gctcgctcccccgtattcagtgcaatgtttgaacacgagatggaggaaaataaaaagaat
agagtagacattcatgatgtggaacctgaagtatttaaagaaatactgagatttatgtat
acgggaaaagcccccaatctagacaagatggctgataacttgatggcagcagcagataaa
tatgcattagagcgattaaaaatcctgtgtgaagaagctttatgcagtagcctttcagcg
gaaaatgttgctgatgtccttatcttggcagatttgcacagtgccgagcagctgaaagca
caagcaatagactttattaacagatgtagtcttctcaggcaactaggttgcaaggacggc
aaaaactggaatggcagtcaagcaaccgacataatggagactgcaggctggaaatccatg
atccagtcccacccacatttagtggcagaggccttccgagcactggcgtccgcacaatgt
ccgccctttggaattcccagaaagcgactaaaacagtcctga
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