Rana temporaria (common frog): 120944264
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Entry
120944264 CDS
T07929
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120944264 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtem04812
]
120944264 (CLASP1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120944264 (CLASP1)
Cytoskeleton proteins [BR:
rtem04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
120944264 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
Cnd1
HEAT_EZ
TOR1L1_N
Adaptin_N
Sec7-like_HUS
HEAT_DAAF5
RTP1_C1
TTI1
MMS19_N
ParcG
MMS19_C
SurE
TAN
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
120944264
NCBI-ProteinID:
XP_040214189
LinkDB
All DBs
Position
6:complement(218651848..218919230)
Genome browser
AA seq
1537 aa
AA seq
DB search
MEQGMEYWFTQIQNKDVGKRLQVGPDLIEYLSDRQKCVDLEQDQTLLDKMVDALATSWVN
SSNYKVALLGMDILSALVTRLQDRFRSQIGTVLPNLIDRLGDAKDSVREQDQALLLKIME
LSCIPQYVWDRMLGGFKHKNFRTREGVCLVLIATLNIYGANSLTLSKFVPHICNLLGDPN
SQVRDAAINCLVEIYRHVGERVRTDLSKKGLPQSRLNVIFAKFDEVQKSGAMIQSASDKN
FDDEDSVDGNRPSSTSSTASSKAPPSARKPVVMGTARRPGPSAVAAKPGGAAKEGGAGGL
DEEDFIRAFEDVPTVQIYSGRDLEESLNKIREILSDDKHDWEQRITALRKVRSLLVAGAA
DYDNFFQHLRLLDGAFKLSTKDLRSQVVREACITLGHLSMILGNKFDHGAEAIMPTVFNL
VPNSAKIMASSGVVTIRLIIRHTHVPRLIPIITSNCTSKSVAVRRRCYEFLELLLQEWQT
HSLERHISVLAETIKKGIHDADSEARIVARKCYWGFHSHFSREAEHLFNGLESSYQKALQ
SHLKSSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPPGSAASRVSATPKTSATPGSLQRS
RSDIDVNAAATSKSKVAGSAAAPFSSAAALPPGSYASLDGPAAKSDGRIRTRRQSSGSNS
SITSAQVDTRGRSRAKIVSQSQRSRSANPASAGSRSNSPGKLLGSGYSSLATSAQRVPQV
PSTDKRSKIPRSQGCSRETSPSRIGGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGF
APLASRRHSRSTSALSTSESVGQSDRYGISQSGKYPSSMNAMRVLSSSTDLEAAVADALL
LGDPRNKKKQVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVL
NHCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETL
VDFVIIHKDDLQDWLFILLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMR
FIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRK
AAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNSSVGSPSNTMGRTPS
RHSSSRSSPLTSPTNCSHGGLSPSLLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDL
NEPVKRDGRKDDLVSREAGMASPVGDHRGGDVVEGGRMALDNKTSLLNTQPPRAFTGPRG
REYSPYPYSDSINSYDKTALKEAVFDDDMDQLRDVSIDHSDFVADLLKELSNHNERVEER
KGALCELLKITREDNLGVWEEHFKTILLLLLETLGDKDHAIRALALRVLREILRNQPARF
KNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLA
AIKMQTKVIERISKESLHQILQDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKP
YLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggaatggaatactggtttactcagatccagaacaaggatgtaggaaaacgg
cttcaggtgggaccggacctgatagaatacctgtctgatagacagaaatgtgtggatcta
gaacaggaccagactctgctggataaaatggtggatgcactggctacgtcctgggtgaat
tctagcaattacaaggttgcgttgctgggaatggatattttatcagctttagttacacgg
ttgcaagatcgcttcagatcccagatcggtacagtcctgccaaatctgatcgatcgattg
ggtgacgcaaaagattcagtccgagaacaagatcaggccctgctgctgaagataatggag
ctgtcgtgcatcccgcagtatgtctgggatcgcatgctgggaggcttcaagcacaagaac
ttccgcacccgtgaaggggtctgtctcgtccttatagcaactcttaacatatacggcgcc
aacagcctgactctgagtaagtttgtgcctcatatatgtaacctgctcggggaccccaac
agtcaggtgcgggatgcagcaataaattgcctggtggaaatctacagacatgtgggagaa
cgcgttcgcaccgacctcagcaaaaaagggcttccccaatctcgattgaatgtcattttc
gccaaattcgacgaagtgcagaaatccggggctatgatccagtcagcgtcggataaaaac
tttgatgatgaggattcagttgatggaaacagaccttcatcaacgagctctactgcgtca
tccaaagcgcctccctctgcccgcaaaccggtagtcatggggacggctcggagaccggga
ccatctgcagtggccgccaagccaggaggagcagcaaaggaaggtggtgctgggggttta
gatgaggaggactttatcagagcgtttgaagatgttccaacagtacagatctattccggt
agggatctggaggaatccctgaataaaattcgggaaatactttccgatgataagcatgac
tgggagcagaggattactgcgctcagaaaggtccgctcccttctcgttgccggtgctgca
gactacgacaatttcttccagcacctgcggctgctcgatggcgccttcaagctctccaca
aaggacctgcgttcccaagtggtgcgagaagcctgcattaccctgggacacctttcaatg
attttggggaacaaatttgaccatggagcagaagcgatcatgcccaccgttttcaatctc
gtgccgaacagtgccaaaattatggcttcttctggtgtggtgactattcgcttaattatc
cgtcatacacatgtcccgaggctcataccgatcattacaagtaactgcacctccaagtcc
gtggctgtgcgaaggcgctgctatgagttcctggaacttctcctacaagaatggcagact
cattcacttgaaaggcacatatcagtgttagcggaaaccatcaagaaaggaatccatgac
gcagattcagaagcgaggatcgtcgcacgaaagtgttattggggattccacagtcatttc
agcagggaagcggagcatttgttcaacgggctggagtcgtcctatcagaaggccctgcag
tcacatctcaagagttcggacagcatcgtctccctcccccaatctgaccgttcctcctcc
agctcacaggagagcttaaatcgccccttatcggctaaaagaagcccgccggggagcgct
gcatccagagtttctgccacaccgaagacttcggccacccccggctccttgcagcgctcg
cgcagcgacatcgatgtaaatgcggcagccacttccaagtccaaagtggcaggttcagct
gctgctccattcagctctgcggctgccttaccccccgggtcttacgcatcactcgatggt
cccgccgctaagtctgatggtcgtatccgcacaaggagacagagttccgggagtaacagc
agcatcacttcggcccaagttgacacccgcggtcgtagcagagccaaaattgtatcccag
tcccagcgatccagatcagcgaatccggccagcgctggcagcagatccaactctcctggg
aagttgctgggaagtggatacagcagcctggctaccagcgctcagagggtcccacaggtc
ccttccaccgacaagaggagcaagattccccgaagtcaagggtgcagccgagagaccagc
ccaagcaggataggaggactggcccggagcagccgcattccccgacccagcatgagtcag
gggtgcagccgcgacaccagccgcgagagcagccgtgacacaagtcccgccaggggcttt
gcacctctcgcctctcgacgtcattccaggtccactagtgcgctctccacttccgagtct
gtggggcagtcagatcgctatggaataagccagtcaggaaaatatccgtcctccatgaac
gccatgcgggttctcagctccagtacggaccttgaagccgcggtggcagacgctctgctg
ctgggagaccccaggaataagaaaaagcaagtgagaaggcgctacgagccgtacgggatg
tattctgatgacgacgccaacagcgacgcctccagcgcgtgctcggaaaggtcctacgga
tctcggaatggcgggattccgcactacctgcggcaaaccgaggacgtggccgaggtcctt
aatcactgcgctagttccaattggtcagagaggaaggaggggcttatcggtctacaaaac
cttttaaaaagtcagcggacgctcagccgggtggagctgaaacgattgtgtgagatattc
acgcggatgtttgccgatccacacagcaagagagtgttcagcatgtttctggaaaccctg
gtggatttcgttatcattcacaaggacgacctgcaggactggttgttcattttactgacc
caacttttgaagaagatgggggctgacctgctgggttctgtgcaggccaaagtacagaaa
gccctcgacgtgacaagggattccttccctttcgatcaacaatttaacattttgatgaga
ttcatcgttgatcagacacagacgccgaacctcaaggtgaaagttgccattttgaagtac
attgagtcgctggcccggcagatggaccccacagactttgtgaactccagtgagacgcga
ttagcggtctctcggataatcacatggacgaccgaaccaaagagctcagatgtgaggaag
gcggcacagatcgtcctcatctctctgtttgaactgaacacgccggagttcaccatgtta
ctgggtgctttgccaaaaacattccaggatggagcaaccaaactactccacaatcatctg
aagaactccagcaacagcagtgtgggatcgccaagcaataccatgggcagaactccttcc
cgacactcgagcagcaggtcaagtcctttaacctcccccaccaactgttcccatggaggc
ctgtccccgagccttctagattatgacaccgaaaacctgaattctgatgagatttatagt
tcgctccgcggcgtcaccgaagccatcgagaaattcagcttccgcagccaagaggactta
aatgagccggttaagcgggacggaaggaaggatgacttggtctcccgagaagctggaatg
gcctctcctgtcggcgatcaccgcggaggagatgttgtggaaggaggacggatggctttg
gacaacaaaacctcactgctgaacacacaaccacctcgcgcttttaccggtccgcgcgga
cgagagtacagcccttacccctactcggactctataaatagttatgacaagaccgcactt
aaggaagccgtgttcgatgatgacatggaccagctgcgtgacgtttctattgaccactct
gactttgtggccgacctgctgaaagagctgtccaatcacaatgagcgagtggaggagagg
aaaggcgccctctgtgaactgctgaagattactagagaagacaacctcggtgtttgggag
gaacacttcaagactattctcctccttctcctcgagactttaggagataaagatcatgca
attcgagctcttgcattacgagtactccgggaaatcctgaggaaccagccagccagattt
aaaaattacgccgagctgacaatcatgaagactctggaggcgcacaaggattcccataaa
gaggttgtcagggctgccgaagaagcggcctccaccctagcaagctccatacaccccgag
caatgcatcaaagtcctctgtcccatcatccagactgccgactatcccatcaatctggct
gccatcaagatgcaaactaaagtcattgagaggatttccaaggagtcgctgcatcagatc
ttgcaggacattattcccgggttgttacagggctacgataatacggagagcagcgtccgc
aaagcaagcgtcttctgtcttgtcgcgatttattccgtcattggagaagagctgaaaccg
tatcttgcgcagctgacaggcagcaagatgaaacttctaaatttgtacataaaaagagcc
cagacgacgaacagcaacagcagctcttcctcggatgtctccacgcacagttag
DBGET
integrated database retrieval system
