Rana temporaria (common frog): 120944304
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Entry
120944304 CDS
T07929
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120944304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120944304
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120944304
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120944304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
RRM_PARP14_1
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
DTX3L_a-b
Siva
zf_RING_Vps8_fungal
zf-rbx1
zf-Nse
zf-RING_10
NID
Motif
Other DBs
NCBI-GeneID:
120944304
NCBI-ProteinID:
XP_040214271
LinkDB
All DBs
Position
6:complement(222396952..222470851)
Genome browser
AA seq
891 aa
AA seq
DB search
MGDTTYRYPVLLQWDQGPKELKKVKNKIHKYFQSPKESSGGDCEIPETDCSRGYILIYFK
EEKAQQRVLQKNPHQVPLEKAGTLLVNVFPDAESAQRMGNPFSSSAASNDDEASGSSSDK
GHQHENDHNPDNRKRKGSLMTDPDPGNGDPKRSGDDSTGRKEWESGVDGKNHNVNSSAPK
SLTEDYNSHQYSDTPRNGSGKNSDDGASGSSLYADHRQGIHWRTNHLARSISLTDRGSKD
ERENRWDFGGTDGKGQDNSSAPRSFTDKSSHEDSFTPGNESRRNPLGRPMNPAPPEIFTK
VTAKLDKEWFTEALQEHMKAEMPSLSIKNESDFVEVIGKFEEIQLVHGYLQGKLEHKFSA
EKPPDTSSDWSPTDSSADQVCVPSALYEYIMEIYRTEMDDLQRTNGVRIDHHSTPEGSTY
VRFISQGSGSSPEKAKERFTDKVQKVTGDWSQETVNSSVVPLTISDIKERVKAWWSNTLV
IQGENKDIVLRGPGDELSQVKTFLETTDHKPSDHKPSDYKTSDHKPSDHKPARPPRPVTI
STSNMKTEIEVDARHMDILRKLKYRQISDIEKKYNVKMEENKKNVSSLVTFRSLNAPPDL
SPHASHSFITLLQKTFFNIERKEISVKPEFTEERVSLVQKQLMMAGIDIVMEYSKGTLLL
IGHPVHVALAEEKLNGNQNSGRGQAAAASEEKMDTSSSSAATKKEEEPDKCPICLCEMKD
KVILEKCKHAYCKDCLKQLMAHKPVCAICGVSYGTVTGDQPDGTMNVNTRKYQHLPGYSG
CGTIEIIYDIPSGIQKENHPRPGRSFSGARRTAYLPDNKEGNEILLLLKRAFDQRLIFTV
GDSRTSGATDTVTWNDVHHKTSTSGGPQSFGYPDPDYLNRVRDELKAKGVE
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggggacacaacttaccgatatcccgtactacttcagtgggatcaggggcccaaagag
ctgaaaaaagtgaagaataaaattcacaaatatttccaaagtccaaaagaatccagcgga
ggagactgtgaaattcctgaaactgactgcagccgaggatacatcctcatatacttcaag
gaggagaaagctcagcaaagggttctacagaaaaatcctcatcaagttccattagaaaaa
gcggggacattattggtgaacgtctttccagacgcagaaagcgcacagagaatgggcaat
cctttctcctcatcggccgcttcaaatgacgatgaagcatctgggtcctcgtctgataaa
ggtcaccaacacgaaaacgatcacaacccagataatcggaagagaaagggttctttaatg
accgatcccgacccagggaatggagatcccaagagatctggagatgattccactggacgc
aaggaatgggaaagtggcgttgatgggaaaaatcacaatgttaactcttctgcaccaaaa
tcattgacagaggattataacagtcatcaatattccgacactcccaggaatgggtccgga
aagaactcggatgatggagcgtctgggtcctcgctttatgcagatcaccgacaaggaatc
cattggagaaccaatcatttggcgaggagtatttcactgacagatcgcgggtcaaaagat
gaacgggaaaacagatgggattttggtggaactgacgggaaaggacaagataactcttct
gcaccaagatcattcacagacaaatctagtcatgaggattccttcactcccgggaatgag
tccagaaggaacccgctaggacgccctatgaacccagcccccccagagatctttacgaaa
gtcacagcaaaattagataaggaatggttcacggaagctttacaagagcatatgaaagcg
gaaatgccatctctctctataaagaatgaatctgattttgtggaggtgataggaaaattt
gaagagatacaactggtgcacggctatctccaggggaaactggagcataaattcagcgca
gagaagcctccagacacatccagtgattggagtcccaccgacagctcggcagaccaggtg
tgcgttccatcggccttgtatgaatacattatggagatctacagaacagagatggacgat
ctacagagaacaaatggagtgaggattgaccatcactccacaccggaaggatccacatat
gtcagatttatctctcagggatcaggatcctcacctgagaaagccaaggagagatttaca
gacaaggtacagaaggtgacgggtgactggagccaggaaacggtgaattcctcagttgtc
cccctgacaatctctgacatcaaagagcgagtcaaagcttggtggagtaatactctggtg
atacaaggagagaacaaggacatcgtccttcgtggtccaggagatgagttgtcccaggtg
aagacgttcttagagactactgaccacaaaccttcagaccacaaaccttcagactataaa
acttcagaccacaaaccttcagaccacaaacccgctcgccctcccaggcctgtgaccatc
tccaccagcaatatgaagacggagatcgaggtagacgccagacacatggatatcctgagg
aaattaaagtacaggcagatctctgacattgagaagaagtacaatgtgaagatggaagaa
aacaagaaaaatgtcagctcccttgtcaccttcagatccctgaatgcaccccctgacctt
tcaccccacgcctctcacagcttcatcacccttctgcagaaaactttctttaatatcgaa
agaaaagaaatcagcgtgaagccggaattcacggaggagagagtgagtctggtgcagaaa
cagctgatgatggcgggaatagacattgtgatggaatattccaaaggcactttgctcctc
atcggccatccagtccatgtcgctcttgctgaggagaaactcaatggaaaccagaattca
ggaagaggtcaggcagcagctgcctcagaagagaaaatggataccagtagttcctcagct
gctacgaagaaagaagaagagccagacaagtgtcctatctgtctgtgtgagatgaaagat
aaggtgatattggagaagtgtaagcatgcgtactgtaaggactgtcttaaacaactcatg
gcccataaacctgtgtgtgcgatatgtggagtctcttatgggacagtcacaggagaccag
cctgacggaactatgaacgtgaacacaagaaaataccaacacctaccgggatattctgga
tgtggaaccatagagatcatctatgacatcccatcgggcatccagaaggagaaccatcct
cgtcccggaagatctttctcaggtgccagacgtacggcttatttaccggataacaaggag
gggaatgagatccttcttctgctgaaaagagcctttgatcagcgactgatcttcactgtg
ggagattctcgtacatccggcgccaccgacaccgtcacctggaatgatgtccaccataaa
accagtacaagcgggggcccccagagtttcggttacccggatccggattacctgaaccgc
gtgcgggacgaactgaaagcgaagggggtcgagtaa
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