Rana temporaria (common frog): 120944385
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Entry
120944385 CDS
T07929
Symbol
NLRC3
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtem04054
]
120944385 (NLRC3)
Pattern recognition receptors [BR:
rtem04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120944385 (NLRC3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
AAA_30
LRR_8
Motif
Other DBs
NCBI-GeneID:
120944385
NCBI-ProteinID:
XP_040214376
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Position
6:complement(30029262..30061308)
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AA seq
1116 aa
AA seq
DB search
MTWIVNNLESLSLIGVLKHDMEALSLLPLVTVSSPLCQAYGSSGTGGSWQSSASLESHTG
VMAKLQELEMLSVEEIRRLQENXPPLNKRAEALMDTLRREGPVGTLQGLQTCIETVRSSI
YCRIRHHDPLVKKHLDSVKYDQQPTASSVGLSLLVEGLTDAQLQEHDIVQLELGQGGRGT
PQKIALGKKLLTPLSRVSLPPRITXTVGVAGAGKSTLVRLFVEKWARGELCTNIPCLLTL
NLWELNVFDRLSVEKLIRIACPSCSVPTPNSLLILDGLDELRAPLDFSESIASTDPQKEL
SPECLITNILRGNLTARCFVWVTSRPGAAAMIPGGLVDRMTEISGLESSEIKQYMDQLLH
DTNGLADRICGHLEGHRSLNALCSVPTLCHIIGVSLGFAAHAYDSTCSSLPMTLSTIFSW
YLKAQFTYLEGIEQPSSARRTVGNLGKLAFQGLLRRRTVFYESDLKSCGIETPILPGSLC
SRLLLPQNSPSCPAFGFSHLLVQEFLAAVHYYSAAKRAIFDLFAEGGVSWPKLGFLNHYK
GATQRXLQTEGAQLSIFLRFLSGFLSLQVVRVLAGCLPNKEEPSSHRGQVMDYLQSLMSA
SKAISCGMVNLMCCLHEMGHTDVICMVEEALKTGTLSRKLSPLTCCALAFLLRTSRSCAE
ETNLSQCLNYNLVQNFLPQLQYCTNLRMENNNFXDDVMELLATILRAKDCAIQKISLSEN
QLSNRGVKVLGKALMVNRTLCSIDLHGNGIGPSGAKALAEALKNNQVLRSLNLQNNQLKS
EGATYLAQSLLLNRKLMALNIQKNGIAWEGAESLAARPQRQTKCLQELWXVHDYSYPSNT
LGDQGATALAAALTKNSGYNYLRSKVIPSCNQGLKSLTIGLSKNQSLKHLNLRENSISIE
GARALAQALHTNTTLTHLDLTANLLHDEGVEALSGALRENHSLDTLHLQWNFLRVGSARS
LADALRVNTCLRCLDLQENAIGDEGVSALCKALQENSTLSALYLQGTAIGPSGAQALAET
LLVNESLTTLDLRGNHIGLVGAKALAGALKVNCTLKILNLQENSIGLDGAICLANAISGN
SSLLSLSLQGNNIGPSGAKVIVETLKSDAPNCTVTI
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgacatggatcgtgaacaacctggaaagcctgagtctcattggtgttttgaaacatgac
atggaagctttatctctcttgcctctagtaactgtctcctctcctctctgccaggcctat
ggatcctccggtacaggaggcagctggcaatccagcgccagtttggaatcccatactgga
gtcatggctaagctgcaggagctggagatgctaagcgtggaggagatccgacgtcttcaa
gaaaactgaccgccattaaacaaacgggctgaagctctgatggacacactcaggagggaa
gggccggttggtacccttcaaggactgcagacctgcatagaaacagtccgctcttccatc
tactgccgcatacgtcatcatgatccattggtgaagaaacatttggacagtgtgaaatat
gaccagcaacccactgctagctcagttggactctctctgttggtcgaaggccttacagat
gcccagcttcaagaacatgacattgtgcagctggaattaggccagggtggaagaggtacc
ccccaaaagattgcccttggaaaaaaactgttgacgccactgtcgagggtcagccttccg
ccacgtatcaccnttactgtaggagttgcaggagctggtaaaagtaccctggtgaggctg
tttgtggagaagtgggcacggggtgagctatgcactaacattccctgtttgttgaccctg
aacctctgggagttgaacgtctttgatcgtctttctgtggagaagttaatacggattgcc
tgtcctagctgttcagtgccaactcccaattcccttctgattttggatggcttggatgag
cttcgagccccacttgacttctctgaatcaatagctagcactgaccctcagaaagaactt
tcccctgaatgtctcattaccaacatcctacgggggaaccttactgcccgatgttttgtg
tgggtaacatcgagaccaggagctgctgctatgattcctggaggacttgtggatcgaatg
acggagatatctggacttgaatcaagtgaaattaagcagtacatggatcagcttttgcat
gataccaatggcttagcggacaggatctgtgggcacctagaaggccatcgttccttaaat
gctttatgttctgttcccaccttgtgccatatcataggagtatctttaggatttgcagct
catgcctatgattctacatgttcttctctacctatgacactctccaccatcttctcctgg
tatctgaaagctcagtttacctacttagagggaatagagcaaccaagcagtgcccgacga
actgttggcaacttaggaaagttggcatttcagggattgcttagaagacggactgtattt
tacgaatcagatttgaaatcttgcgggattgagactccaatattaccaggaagcctttgt
agtcggctgctgctgccccagaattcaccctcctgtcccgctttcggcttctcccacctc
cttgtacaggagttcctggcagctgtccactactattctgcggccaaacgtgccatattt
gacctctttgctgagggaggagtttcttggcccaagttgggctttctaaaccattacaaa
ggtgcaacacagcggnttttacaaacggagggagctcagctgtccatcttccttcgcttc
ctctctggcttcctgtctttgcaggttgttagggttttagctgggtgcctgccaaacaag
gaagagcccagcagccaccgtgggcaagtaatggactaccttcagagcttgatgagtgcc
agcaaggcaatctcctgtggaatggtgaacttaatgtgctgcttgcatgagatgggccac
accgatgtgatctgtatggtggaggaggctctgaagaccggaacactcagcagaaaattg
agccctttgacttgctgtgctcttgcattcttacttagaacatctcgcagctgtgccgaa
gaaacaaacctttcccagtgtctaaattacaatctggtacaaaacttcctgccacagcta
cagtactgcactaacctcagaatggagaacaacaactttnaagatgatgtgatggagctt
ctggctaccatcctgcgagccaaggactgcgccatccagaagatcagtctgtcggagaac
cagctgagtaacagaggtgtgaaggtgctgggaaaagccctcatggtgaaccgtacgctc
tgctccattgacctgcatggaaatggcattggacccagcggtgccaaggcgttggcggag
gctctaaagaacaatcaagtactgcggagcttgaatcttcagaacaaccagctcaagtct
gaaggagcgacatacttggcccagtctctgctgctgaaccgtaagctgatggccctgaac
attcagaagaacggcattgcctgggagggggcagagagcctggcagccaggcctcaaaga
caaaccaagtgcctccaggagctatggtgagtccatgattatagttatccaagcaacacg
ttgggagaccaaggagcaacagccctggcggcagctctcaccaagaactcaggttataat
taccttagaagtaaagtaattccatcatgcaaccaaggccttaaatctctgaccattggc
ctcagcaagaatcagagcctgaaacacctaaacttgcgtgagaattccatcagcatcgag
ggagcccgagctctggcccaggccctccacaccaacaccacactgacacacttagatctg
acggccaaccttctgcatgacgagggagtggaggccttgtctggagccctgagggagaac
cacagtctggacactctacatctccagtggaatttcctacgagtgggatcagcgaggtcc
cttgccgatgcgcttcgagtgaacacgtgtttacgctgtttagatctgcaggaaaatgcc
atcggagatgagggggtgtctgcgctctgcaaggctctgcaggagaactctactctttca
gctctctatttacagggaaccgccattggaccatccggggcacaggctctggcagagacg
ttgctggtcaatgagagtcttaccactcttgatctgcgagggaaccacatcggccttgta
ggagccaaagccttggcaggagctctcaaagttaactgcacattgaagatcctcaacctg
caggaaaactctattggtctggatggcgctatctgtttggcaaacgccatttcgggaaac
tcttctctcctgtctctcagtttacaggggaataacattgggccttctggtgccaaggtg
atagtggaaaccctgaagagcgatgctccgaactgcacagtgaccatatga
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