Rana temporaria (common frog): 120944453
Help
Entry
120944453 CDS
T07929
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120944453 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rtem04091
]
120944453 (FREM1)
Lectins [BR:
rtem04091
]
C-Type lectins
Lecticans
120944453 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
Cadherin_5
Motif
Other DBs
NCBI-GeneID:
120944453
NCBI-ProteinID:
XP_040214447
LinkDB
All DBs
Position
1:complement(303624848..303838752)
Genome browser
AA seq
2165 aa
AA seq
DB search
MNPCWRCPLYPSFALILVTLRFLSSSFIKVNNGITVMKGQSGYLSEEDLQFSIPKEKDAC
KVEVVVNEPITQRVGKLSPQVFDCHFLSKEVQYVHNGCPILHEDDVMLRLYRFTENETIT
ENFILRVKLVEPDCNIINLGPKKLEVTEFYGLSNVIDKNILTLDYEKRMNLECTIRVATI
ESHLPAHGQLVTGDPVKEQPRGDHPPSYFSSSHQKTGPLCKRGDCIPGLNKLTKTIKTSC
EDFLLMGIRYQHLDPPSPSIDYITIRLDLIDTRSRSLYKSEHAWIPVHIQNAVPNQIPKA
AFMSMYILEVDQFILTPLTTATLDAEDGETPKPLLVFNVTDPPREGYITHLNDHTKPITS
FTWQDLNDMLIAYQPPNSSHTERRTLEVEVEVHDFFFERSLPITVHISVRTAETNAPRVS
WNMGLDLLEGQSRPITWKQLQVVDNDNINAVRLIIVDGLEHGRITVRGGKGFMFTVKDLQ
AGVVCYHHDDSDTTKDFVTFRIFDGRHSIRHKFPINILPKDDSPPFLITNTVIELAEGQT
VLIQGSMLCASDMDSSDDYIRYNITKKSAAGSIMKKPGQKALAYPVTTFLQRDLFNGFIY
YKHHGEEIFEDSFDFIMCDSHTPPNLSGPQTVIIHIIPVDDQLPKEVPKTVRNLLLKETE
IAYITKKQLHFIDTESPERELIYTVTTPPCRSSASSGLEAGKIILVETVPMFVKDHTASM
VLTFTQHAVSHMKVAYMPPIEDIGPNAVHIQFVLSVSNHHGTVHGICFNITILPVDNQPP
QVFTFDMSVEEGGSQQLTMDYIRMIDKDTAQDHLGVILQKAPLHGMVQLDGRAVNEGEQF
SYQDLSMLKVRYQHDGSESLWDEVTFIATDGINSADFLLKIQVFPVNDEPPVMKDNLLPT
IYCAEGNEVVISTDYIYAVDVDSDDMKLMFMIARQPRWGIVLKAGITVDRFSQRDILQGI
VIYRHTGGEIGLEPCFDTITLVISDAELDADIKCCFNTHHNPLLPSHDSFPVYDLNITVL
PGDNQAPSITIGDIFSVDEGKSSAFSVNHLLANDPDTDNNNLKFILVSPPQYGYIENILP
SPGFEKSNMGISIDVFLLKDILSHNVNYVQSRHQRMEPTADQFVFYVTDGKHRSVEKPFY
IVINPTNDEVPEFMARNITVEEGDMLELNPSIINVADMDVPPNKLLFTVTVQPKHGMILE
KNDGTDNKKELLKTLKSNTLPMMQDFSLDHLKNGMKLVYVHDDSENLADSFTIKLSDGKH
EVQRTIFVTVNGINDEKPVLTKHCEVVLSMGEHYIISSAVLSAEDKDTPREQIHYVIERI
PDQGQLQLKTKDIWVNLQAGMMCTQENIDMNLVRYVHTGPIGLKNQDSFTFHLWDGRNRS
PQIQFHIKVKDMEKGDIVLSLKMLHVSRGDRAIISTDVLFAFDGTDKPEELLYVLSSPPQ
YGQIEYVNHPGIPITSFSQMDVAAQTVCYFHNGKAAAAADTFKFLVSNGLQTKHGTLQVD
VEMVDRTPPTLSKNYGLKQRKGSVALISPDILQTMDPDTATENITYLIMEHPQYGHIYVR
GSSLLKNFTQRDIDNMDVAYKHSGQDAQIDKFTFVVTDRSNKGFIIDGKVQFEPIPFIIQ
VDFPDDTSPKIVNLQCATKVQLIRDGQYGIYITSRELKATDAGTEDENIIFKILSAPQKS
YLENVTSGRIIKEQFTQKDLNNKSILYIINPSLDVYEDAMEFEVSDPAGNRALPKILSLK
WSRIEVFQAKYEVCETEAGVSLKLTRKGYPVDSAFITVMVNGISAMDGKDFSTSPSKLIQ
FDPGVSTKTWNIAITQDGLEEDDETFEVILNSPVNAVLGTKTRAVVKIVDPKGGICQKNA
GERLQNCTSQPKWSTCSIGLAEVPLPDMKKTDGGIKGDLPEDMSLVQTGKKRLRVIGNGK
SVKPSFVYNKGTDTIYQYHSMVSLKVEEEKPSFNSTQTAKLLVRSHGQKRIKVPAQNTEL
PQSDRAISSDTAKQEKGMTFPKKCTPDLKGLLHFDDKSQQLYQCDGISWNIWGANAKATK
CPFGWTPHDSSCYKHITEQKATWITAARICQEQYHATLVDIFSKEQMDWLWKFSGRKSFW
IGLTNRANSADWEWSKGEKATFTNWKRRPPRQTSKGKNCVLVQKKGKWHVKNCQKSNYFI
CSKLV
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctgttggagatgtcctttatatccctcatttgctctaatactggtgacttta
aggtttctgagctcatcttttatcaaagtaaataatgggatcacagtgatgaaaggacaa
agcggctacctatcagaagaagatctacaattctccattcccaaagagaaagatgcctgc
aaagtggaagtcgttgttaatgaacccataacacaaagagttggaaagctctctccacag
gtatttgactgccattttctgtctaaagaagtacagtatgttcacaatggttgcccgatc
ttacatgaagatgatgttatgctcaggctttacaggtttacagaaaatgaaaccattact
gaaaactttatactgagggtgaagctagttgaaccagactgtaacatcataaacttggga
cccaagaaactggaagtaacagagttttatgggctgtcaaatgttattgataagaacata
ttaaccttggactatgaaaaaagaatgaatctggagtgcactattcgagtggccactata
gaatctcatttgccagctcatggacaattggtcactggagatcctgtgaaagagcagcca
cgaggagaccacccacccagttacttcagtagctcccaccagaagacgggtccattgtgc
aagcgtggggactgcattccagggctgaataaactgacaaagaccataaaaaccagttgt
gaggactttcttctgatgggtatcaggtaccagcacctagatccgccatcaccaagcatt
gattatattaccatcaggttggatcttattgacacaagaagcagatccttgtacaagtca
gagcatgcctggattcctgttcacatccaaaatgcagttcccaaccagatccccaaagct
gccttcatgtcaatgtatattttggaagtggatcagtttatccttactcccctgactaca
gcaacacttgatgcagaggatggagaaaccccaaaacctttactggtcttcaacgtcaca
gatcctccacgagaaggatacattacccatcttaatgaccataccaaacctattacctcc
tttacatggcaggatctcaatgatatgcttatagcatatcagccacctaacagtagtcac
accgaaagaagaactctggaggtggaggttgaagttcatgatttcttttttgaaaggagt
ttgcctatcacggttcatatatcagttagaactgctgaaacaaatgcccctcgagtatcc
tggaatatgggtcttgatctcttggaaggtcaatctcgaccaatcacatggaaacaactt
caagtggttgataatgataatatcaatgctgtccgcctgatcattgtagatggcctagag
catggacgcattactgtaagagggggcaaaggatttatgttcacagtaaaagaccttcag
gctggagttgtctgctatcatcatgatgacagtgatacaaccaaagactttgtcactttc
cgaatctttgatggacgccacagtattagacacaagttcccaattaacatactccctaaa
gatgatagcccacctttcctaattacaaacactgtcattgagcttgcagaaggtcagact
gttctcatacaaggctcaatgctctgtgcctccgatatggactcaagtgatgattacata
cgttacaatataaccaagaaatcagcagctgggagcattatgaagaaaccaggacaaaag
gcattagcgtatcctgttacaactttcctgcaaagagacttgtttaatggtttcatatat
tacaagcatcacggagaggaaatctttgaagattcttttgactttattatgtgtgacagc
catacgccccctaacctctctggtcctcagactgtgattatacatataataccggtggat
gaccaacttcccaaggaagttccgaaaacagttcgcaatttgcttcttaaagaaacagaa
attgcttacattacaaagaaacagctacatttcatagacactgagtctccagaaagagaa
cttatttacaccgtgactactccaccatgccgatcatcagcatccagtggtctagaagct
ggaaagattattttagtggaaacagttcccatgtttgtaaaggatcacactgctagcatg
gtactgacatttacccagcatgcagtgagtcacatgaaagttgcatacatgccaccaatt
gaggatataggtcctaatgctgtacatatccagtttgtattatcagtcagtaaccatcac
gggacagtgcatggcatctgcttcaatattaccatacttccagtagacaaccagcctcct
caggtatttacatttgacatgagtgtggaggaaggtggctctcagcagctgacaatggat
tatatccgcatgattgacaaggacacagcacaggatcatcttggtgttattctgcagaaa
gcacctttacatggcatggttcagctggatggaagagctgtgaatgaaggagaacaattc
agctaccaagacctgagcatgctaaaagttaggtatcagcatgatggctctgaatccttg
tgggatgaagttacatttattgctacagatgggatcaattctgctgactttcttctaaaa
atacaggttttccctgtaaatgatgaaccaccagttatgaaggacaatcttttacctacc
atatattgtgcagaaggtaacgaagtagtgatttccacggattacatctatgctgttgat
gtagacagtgatgatatgaagctgatgttcatgattgcccgtcagcctcgttggggtatt
gtcctgaaggctggaatcactgttgaccgattctcccaaagggatatacttcaaggcatt
gttatctacaggcataccggtggagaaattggattggagccttgctttgacactataaca
cttgttatttctgatgccgaattggatgcagacataaaatgctgttttaatacacatcat
aaccctttactgccaagtcatgattcctttcctgtatatgaccttaatatcacagtttta
ccaggagataaccaggcaccatctattacaataggtgatatattttctgttgatgaaggc
aaatcgagcgcgttttcagtaaaccacttgcttgccaatgatcctgacacagacaataac
aatttgaaattcattttggtatcacctcctcagtatggctacatcgaaaacatccttcca
tctccaggctttgaaaaaagcaacatgggaataagcattgatgtatttctgctgaaagat
attctatcccacaatgtgaattatgtacagtcaagacatcaaagaatggagccaacagca
gaccagtttgtgttttatgtcactgatgggaaacatcgctcagtggagaagcctttttac
attgtaatcaatccaacaaatgatgaagttccagagttcatggccaggaatattactgtg
gaggaaggagacatgctagagttaaatccctccataattaatgtggcagacatggatgta
cccccaaataaattattattcactgttactgtgcaacccaagcatggcatgattttggag
aagaatgatggtactgataacaaaaaagagttacttaaaaccctaaagagtaatacactt
cctatgatgcaggatttctccctggaccaccttaaaaatggtatgaagttagtgtatgta
catgatgattcagaaaaccttgcagacagtttcacaatcaagttgtcagatggaaaacat
gaagttcagagaacaatctttgtcactgtcaatgggattaatgatgaaaagccagtcttg
acaaagcactgtgaagtagtactaagcatgggtgaacattacattatttcaagtgctgta
ctgtcagcagaagataaagacacgccacgagagcaaatccactatgtgattgaaaggatt
ccagatcaaggacaacttcaattaaagacaaaagatatctgggtgaacctacaggctggt
atgatgtgcactcaagagaacattgatatgaacctagttagatatgtacacacggggcca
ataggtttaaagaatcaagacagctttactttccacttatgggacggcaggaacagatca
ccacaaatacagtttcacatcaaagtcaaagatatggagaagggagacattgtactgtca
ttgaaaatgctccatgtgtcaagaggtgacagagccatcataagtactgatgtgctcttt
gcttttgatggcactgacaaaccagaagagctgctctacgtgctctcctcaccgcctcag
tacggccagattgaatatgtcaaccaccctggaattcccataacaagcttcagtcagatg
gatgtggctgctcagactgtctgctacttccacaatggcaaagctgcagctgctgctgat
acgttcaaattccttgtcagtaatgggctgcagacaaagcatgggaccctgcaagttgat
gtagagatggttgataggactccaccaacattatcaaagaactacggtcttaagcagagg
aaaggatcggtggctctgatttctccagacattcttcaaaccatggatcctgacacagca
actgaaaatattacatatctgattatggaacaccctcagtatggacatatatatgtgaga
ggttcatccctgctgaaaaactttacccaaagagatattgataacatggatgttgcctac
aaacacagtggtcaagatgctcagattgacaagttcacatttgttgtgacggacaggtcg
aataaaggctttataattgatgggaaagtgcaatttgaaccaatacctttcattatacaa
gtggactttccagatgataccagtcccaaaatagttaatcttcagtgtgctactaaagtt
cagctcattcgagatggccaatatggaatctacattacatctagagaattaaaggctaca
gatgctgggacagaggatgaaaacatcatattcaaaatattaagtgcacctcagaaaagt
tacctggaaaatgtaacttcaggcagaattattaaagagcaattcactcaaaaggattta
aacaacaaatccatattatacattataaatccctcacttgatgtgtatgaggatgctatg
gaatttgaagtttcagatccagctggaaacagagcgttaccaaaaatcttaagtctgaaa
tggtctcgtattgaagtatttcaagccaagtatgaggtgtgtgagacagaagcgggggtg
tctttgaagctcacaaggaaaggttaccctgtagactctgccttcatcacagtaatggtg
aatggaataagtgctatggatgggaaagacttttctacaagtccttctaaactcatacaa
tttgacccaggagtgtcaaccaagacttggaatatagcaattacccaggatggattagaa
gaagacgatgagacctttgaagtcattctgaattctcctgtgaatgctgttcttggcact
aagacaagagctgtagtgaaaattgtggaccccaaaggaggtatttgtcaaaagaatgct
ggagaacgtctacaaaactgcacctcccaaccaaaatggagcacttgcagcattggtcta
gcagaagttccacttcctgatatgaagaagacagatgggggaattaaaggagatctacct
gaagatatgagtcttgtacaaactggaaagaagagacttcgggttattggaaatggaaaa
tctgttaagccttcatttgtatacaacaaaggaactgatactatttatcaatatcacagt
atggtgtcacttaaagtggaagaagaaaagccatcatttaactcaacccagacagccaag
ttattagtaaggagtcatggccagaagagaataaaagttcctgcacaaaacacagaactt
ccacagtcagacagggccatatcttccgatactgctaagcaggaaaaaggaatgaccttt
cctaagaagtgtactccagatttaaaaggactcctgcattttgatgataagagccaacag
ctttaccagtgtgatggtatatcatggaacatatggggagctaatgccaaggcaacaaaa
tgtccatttggctggactccacatgacagcagctgctacaaacacatcactgagcagaag
gccacatggatcaccgcagcccggatatgtcaggaacagtaccatgcaacacttgtagat
atcttcagtaaagaacagatggattggctgtggaagttcagtggaagaaagtcattttgg
ataggccttactaaccgtgccaacagtgctgactgggaatggagcaaaggagagaaggca
actttcacaaactggaaaagacgtccaccgcgccagacaagcaaagggaaaaattgtgtt
ttggtgcaaaagaaaggcaaatggcatgtgaaaaactgccagaaatcaaattattttatc
tgctcaaaactggtgtag
DBGET
integrated database retrieval system
