Rana temporaria (common frog): 120944483
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Entry
120944483 CDS
T07929
Symbol
PSIP1
Name
(RefSeq) LOW QUALITY PROTEIN: PC4 and SFRS1-interacting protein
KO
K25057
PC4 and SFRS1-interacting protein
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120944483 (PSIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120944483 (PSIP1)
Spliceosome [BR:
rtem03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
120944483 (PSIP1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
120944483
NCBI-ProteinID:
XP_040214478
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All DBs
Position
1:complement(304283208..304392459)
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AA seq
553 aa
AA seq
DB search
MTRDYKPGDLIFAKMKGYPHWPARVDELPDGAVKPPSSKMPIFFFGTHETAFLGPKDMFP
YEENKEKYGKPNKRKGFNEGLWEIDNNPKVKFSTPQNILSLADAVEGDEEDAQEILEEPG
EQSLQKKRKILTSKTSSKHSDSSGLGSPEKDLNTSKEDSSDQLGSEDGPTNSPVKNKRGR
KKKVDILAEAERNASPLAIDQLKPSPKRGRPASTEPKVPKPRGRPRLKPLPTSPDREITD
QEDQVKKKALEKSPKQLLSRKDDEATKENDDKPQKETSKKEVETKKKVTGKVDSASHSES
EDEVEEGKQKGKVGRPPQAALKRAAKPVQEKEVADKKKKLEDTVEAESHCKEETKKADVR
KFDKKKETSIDARLQRIHAEIKSSLKLDHQDVNRCIIALDELASLQITMQHAQKHTDMIT
TLKRIRRFKASQVVMEKASMLYNKFKNMFLVGEGDSVITQVLNKSLAEQRQQEEANKSKD
VGKRAPHKKPEKEPSSDTKAVNGGREAQDQAQQNRDSGEENDGKEDKTTKRSTVGSKAAE
PNKQISDDSASDN
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacacgagattacaagcctggggacctaatttttgccaagatgaaaggttatcctcac
tggcctgcaagggtcgatgaacttcctgatggcgcagttaagcctccgtcaagtaaaatg
cctattttcttttttggaacccatgaaacagcttttttgggaccaaaggacatgtttcca
tatgaagaaaataaagagaagtatggcaaacccaacaaacgaaagggattcaatgaaggt
ttatgggagatagataacaatcccaaagttaaattctcaactcctcagaatattttgtct
cttgccgatgctgttgaaggggatgaagaagatgcacaggaaattttagaagaacctggg
gagcagtcactccaaaaaaaacggaagattttaacatcaaagacttccagcaaacattct
gactccagtggtcttgggtcaccagaaaaagatctcaatacttcaaaggaggacagtagt
gaccaacttggcagtgaagatggaccaactaattcacctgttaaaaacaagcgaggccga
aagaagaaggtggatattttggctgaagctgagcgtaatgcaagtcctttagcaatagat
caactaaagccaagtcccaagagaggcagaccagcttccacagaacccaaagtgcctaaa
ccaagaggaagaccaaggctgaagccactacctacttcaccagatcgtgaaataactgat
caagaagatcaagtaaagaagaaagctctagaaaaatcaccaaaacagctactttctaga
aaggatgatgaagcaacaaaggaaaatgatgacaaaccgcaaaaagagaccagcaaaaaa
gaagttgaaacgaaaaaaaaggttactggaaaagttgattcagcttcccattcagaatct
gaagatgaagtggaagagggaaagcagaaaggcaaggttggcagacctccccaggctgct
ctaaagcgtgcagcaaagcctgtgcaagaaaaggaagttgctgataagaaaaagaaacta
gaagatactgtggaggcagaaagccactgtaaggaggaaactaaaaaagcagacgttagg
aaatttgacaagaaaaaagaaacctccattgatgctaggcttcaaaggatacatgcagaa
ataaagtcgtctttaaagcttgaccaccaggatgtaaacagatgtattatcgctttggat
gagctggcttctctccagatcaccatgcaacatgctcagaaacacacagatatgatcact
actctaaaaaggattcgtcggttcaaagccagtcaagttgtaatggagaaggcctctatg
ctttacaacaagttcaagaacatgttccttgttggagaaggagactctgtaataactcag
gttcttaataagtctttagcagaacagagacagcaggaggaagccaataaatcaaaggat
gtaggaaagagagcgcctcacaagaagccagagaaagaaccaagctcagatactaaagcg
gttaatggtggccgggaagcacaggaccaagcacaacagaatagagacagtggtgaggaa
aatgatggcaaagaagacaagacaacaaaacggtcgacggttggatcgaaagcggcagag
cccaacaagcaaataagtgacgattcagcctctgacaactaa
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