Rana temporaria (common frog): 120944825
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Entry
120944825 CDS
T07929
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120944825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtem03009
]
120944825
Ribosome biogenesis [BR:
rtem03009
]
Eukaryotic type
Pre-60S particles
RNases
120944825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
KIX_2
Takusan
ADK_lid
KIF9
Motif
Other DBs
NCBI-GeneID:
120944825
NCBI-ProteinID:
XP_040214544
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All DBs
Position
1:309793239..309897951
Genome browser
AA seq
998 aa
AA seq
DB search
MLYSAGFFQQLPCPYIRGSGECVRPHCHFQHVSPEVPREQSDDTSPSDSPAKVVGPPKET
LGKKISELERLKKAIETVKNEVEESQKKLLQYTNGPNTMQEPLEVDMNCNILDPIEDEKT
TTKKNLDVLVTCPKNRKKKYVVDRSCPATDLEYDPLLNYTAGFFGSTSKENENKTMKPKC
EEVLDNPQKKPRIVSPIRLEIKLQESDDDDMLVIDAPPLEVVSKRKRPSKVCDPVRKHVA
LVEAAVSEETGSSMECETLAPNYDHSDENGTSEANKSEASHNLLPTCMNDGVLQHENHCN
DQIKSEENTTSSINESKNVETDVSVSGKETNEEQENLIENVVEKDSSPLVSEKSLDFCDR
EVFPNSSADLEIIKVAATTALDKTAVHNLPNEQKSLPEIVYVPNKRDKVIVVNSSTDEDS
SEEDTVSDSEDPTEECLRIFNEFAESEAKKNASQAVHCEEDQPDPELQLKGNELLPGQRK
RIAHPSAKCEAKETGSILVPFRRSAPHQMPPQRIVQVHQQAVQISSAVKGGQAFVASSQK
RLASRITPGFHSFGQMVCVNLVEVQPILPSRSHISGQGSTLLTTVKSGFPQRRTMPTPAK
ISCRRRASVIPESSSKVPHETRQRYVNSFVEEFLKESASVQEAFDKALTEEKAIYERCGS
KNMYLSIAVNSLKKLRDQRTINDSQRSRKQDDKNELTGPTLYNFLKEYLLSEDQLIENGY
PRPNPEKPGSALLQNAGGKNINNDALRRVCSRCGEIYAVTLQGKHVRKEECSYHSGRVRK
HKVPGGMETRYSCCEAAVGAPGCQMAKLHVHEGHKENLDGFIGTFPKLQPSDDNPGIFSV
DCEMCYTTHGLELTRVTVVSHSLQVVYDTFVKPDNDIIDYNTRFSGITEDSLTNITTSIR
DVQAIMLNLFSADTILIGHSLENDLIALKLFHDMVVDTSIVFPHRLGLPHKRALRYLIAD
YLRRIIQDNVAGHDSVEDATACMELMLWKVKEDTKGRR
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgttgtattctgcagggttcttccagcagctcccctgcccatatatcaggggctcaggg
gaatgtgttcggccacactgccacttccagcatgtgtcacctgaggtacccagggagcaa
agtgatgacaccagtcccagtgactcgcctgccaaggtggtggggccacctaaagaaacc
ctgggtaaaaaaattagtgaactggagaggcttaagaaggcaattgagactgtaaaaaat
gaggtagaagagagccagaaaaagttattacagtatacaaatgggccaaataccatgcaa
gaaccacttgaggttgacatgaattgtaatattctagatcccattgaagatgagaaaact
acaaccaagaaaaaccttgacgttttggtcacctgcccaaagaaccgtaagaaaaaatat
gtggttgatcgaagctgtccagctacagatctagagtatgaccccctacttaattatact
gcagggttttttggttccacctctaaagaaaatgaaaacaagactatgaaaccaaaatgt
gaagaggtgttggataaccctcaaaagaagcctagaattgtatctccaataaggcttgaa
ataaaacttcaagaatctgacgatgatgatatgcttgtcattgatgctccaccactagaa
gttgtttctaaaagaaaaaggccaagtaaagtgtgtgaccctgtaaggaaacatgtggca
ttggttgaagctgctgtatctgaagaaactggatctagtatggaatgtgagactttggct
ccaaattatgaccattctgatgaaaatggcacttctgaagcaaataaatccgaagcttct
cataatttactacctacctgtatgaacgatggtgttctgcaacatgaaaatcactgtaat
gaccagattaaatcagaagagaatacaacctctagtataaatgaatctaaaaatgttgag
acagatgtttcagtgagtggtaaagaaactaatgaagagcaagaaaacttgatagaaaat
gtagttgaaaaggattcatctcctctagtttctgagaagtctttagatttttgtgaccgt
gaagtttttcctaactcatcagcagacttggaaatcattaaggttgctgctaccacagcc
ttggataaaactgctgtccataaccttcctaatgagcagaaatccctgccagagatcgta
tacgtgccgaacaaaagagacaaagtcattgttgtgaattcgtcaactgacgaagacagc
tcagaagaggacaccgtgtcagattccgaagaccccacggaagaatgtttgcgtattttt
aatgaatttgctgaaagtgaagcaaagaaaaatgcaagccaggcagttcattgtgaggaa
gatcagcctgatccagaactacagctgaaaggaaatgagcttctaccaggacaaaggaaa
agaattgcacatccgtcagcaaaatgtgaagccaaggaaactggttctattcttgttcct
ttcagaagatctgctccacaccaaatgccaccccaaaggatagtgcaggttcaccagcaa
gcagtgcagattagttctgcagttaaaggtggacaagcctttgtagcttcttcacagaag
aggcttgccagcaggattacaccaggatttcactcattcggtcagatggtttgtgttaat
ttagttgaggtacagccgattttgccatctagaagtcatataagtggacaaggaagtaca
cttttaaccactgtaaaatctggtttccctcaaagaagaacaatgccaactccagcgaag
atatcatgccgcagaagggcatcagttattcctgaaagcagttctaaagtgcctcatgaa
acaaggcagcgatatgttaactcttttgtggaagagtttttgaaagagtctgcatccgtc
caggaagcctttgataaggctttaacagaagaaaaggcaatttatgagcgttgtgggagt
aagaacatgtatcttagcatagctgttaatagccttaagaagctcagagatcaacgcact
attaatgattcacaacgttcaaggaaacaagatgataaaaatgaattgacagggcccacg
ctttacaacttcctaaaagaatacctcttgtctgaggatcagttgatagaaaatggatat
ccccgaccaaaccctgagaagcctggcagcgctttattacagaatgctggagggaaaaat
ataaacaatgatgctcttagaagagtttgttctcgctgtggagaaatctatgcagtgaca
ttgcaaggcaagcatgtacgtaaagaagaatgctcatatcactctggtagagttcgaaaa
cacaaagtcccaggtggaatggaaacacgctacagttgttgtgaagcagcagtaggagcc
ccagggtgccaaatggcaaagctccatgttcatgagggtcataaggaaaatcttgatgga
tttatagggactttcccaaagcttcagccttctgatgacaatcctggaatattttctgtg
gactgcgaaatgtgctacaccacacatggtctggaacttacaagagtcacagtggtcagt
cacagtttacaggtggtttatgatacttttgtgaagccggacaatgacatcatagattat
aataccaggttttctggtatcacagaggacagtctgacgaatatcacaacatctattaga
gatgtacaggccatcatgcttaacttattcagtgctgatacaattctaattggacatagt
ttggaaaatgatttaattgcacttaagctctttcatgatatggttgttgatacttcaata
gtgtttccacacagactaggtttgcctcataaaagagcactgagatatttaattgcggac
taccttagacgaatcatccaggataatgttgctggtcatgattctgttgaagatgctact
gcatgcatggagttaatgctctggaaagtaaaagaggacacaaaagggcggcgatag
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