Rana temporaria (common frog): 120944955
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Entry
120944955 CDS
T07929
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120944955
04121 Ubiquitin system [BR:
rtem04121
]
120944955
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120944955
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120944955
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
zf-C2H2_7th_ZNF462
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
120944955
NCBI-ProteinID:
XP_040214667
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Position
1:311506408..311509332
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AA seq
624 aa
AA seq
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MASGGKEELERPASFKSPVWDHFGFPVKYDHEGKRMVDKTVTACRHCGTRKPYDSGNTSS
MATHLKRHHPGVPLTVTGVKTKAVQQPLITAAFKQPLIPQSDRAKAITKAIGVFIGADMR
PYSIVQNEGFKHMLNVLEPRYNIPSRTHFSEKVVPELYEQEKKKVVDELSQASSVALTTD
GWTSRGTESYITITAHFITADWEMRSPVLQTRPLYESHTSAHLAQVLTEAVDEWKLKRPS
TNIPVTTDNAKNQVNAVIEAGLGPQIGCFAHVVNLASQKGISVSRMDRLLGRIRKVVSYF
HRSTTAAHVLKTKQEMLKLPKHKLINDVPTRWNSTYDMLERYLEQQAAIYSALTDKTLKK
IVKDIITLSDDDVRVAEEVLQVLQPLKMVTSLLSTESSPSVSMIMPLKTRILQSMAPGVE
DSTITQDVKTAIREDLQPRYTSPPTLQDYLHRSTALDPRFKSLSHMDPALRQRTYSDLTT
EIVSSLGTKDCDEGQAQAAEPTGANLDSSSPPQKKSAMAELFGETFASKDNKTSADIIKE
EVESYLLAASGITVDGDPMTWWKSNECKYPHVAKMARCYLAVPGSSVPSERVFSTAGDIV
TAQRSTLSPENVDILVFLKKNLKL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggaggaaaggaggagcttgaacgccccgcgtcgtttaaatctcctgtatgg
gatcattttggcttccctgtgaaatatgatcatgagggaaagaggatggtagataaaacc
gtgacggcgtgtaggcactgtggcacaagaaagccatacgatagtggaaacacgtcaagt
atggccacgcatttgaagcgtcatcaccccggtgttccactgacagtcacaggagtgaaa
acaaaagctgttcagcaaccactcatcaccgcagcatttaaacagcccctcattccacaa
tcggaccgggctaaagcaatcacaaaagcgatcggcgtgtttataggtgcagatatgagg
ccatactccattgtgcagaacgagggctttaagcacatgcttaacgtgcttgagccacgt
tacaacatcccgtcgcgcacccacttcagcgaaaaggttgtgccagaactttatgaacag
gagaagaaaaaagtcgtggatgaactatcccaagcatcgtctgttgcgctcacgacagac
gggtggacgtccaggggaacagaaagctatataacaataaccgctcacttcatcacggca
gactgggagatgagaagtccggtgctgcagacacgccccctctacgagagtcacacaagc
gctcatctcgcgcaggtgctgacagaagcggtggacgaatggaagctaaagaggcccagt
actaatatcccagtcacaactgacaatgccaaaaaccaagttaatgccgtgattgaggca
ggactgggcccacagatagggtgctttgcacatgtcgtaaatttggcatctcagaaggga
atctctgtcagtaggatggaccgcctccttgggaggatcaggaaggtggtttcctatttc
caccgaagcacaacagctgcccatgtgcttaaaacaaagcaagaaatgctaaagctgcct
aaacacaagctcataaatgatgtgccaacaaggtggaactccacctatgatatgctggag
cgttatctggagcagcaggcagctatatactctgcactgactgacaagaccctaaagaaa
attgtcaaggacatcattaccctgtctgatgatgatgtgagagtggcagaggaggtcctc
caggtgcttcaacccctcaagatggtaacatctcttctgagcactgaaagttcaccatct
gtatcgatgatcatgcccctaaaaacaaggattctacaatccatggctccaggtgtggaa
gacagcaccatcacacaagatgtcaagactgccattagagaggacctgcagcccagatac
acttcaccccctactctacaggactaccttcacagatctactgccctggatccaaggttc
aagtccctgtctcacatggaccctgccctacgccagaggacatacagtgacctcaccacc
gagattgtgagcagtctgggcactaaagactgtgatgagggtcaagctcaagctgcagag
ccaacaggagcaaacttggactcctcatctcctccacaaaagaagtcggcgatggcagag
ctttttggagagacctttgccagcaaagacaacaagacttctgctgacatcatcaaagag
gaggtggaatcctatctgctggcagcaagcggcattacagtcgatggtgatccgatgaca
tggtggaaaagcaatgagtgtaaataccctcatgttgccaagatggcaagatgctatctc
gctgtgccaggctcttcagttccttctgagagagtgttctcaacagcaggggacatagtg
actgcacagaggtccacactctccccagagaatgtagacatccttgtctttttgaaaaag
aatttgaaattataa
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