Rana temporaria (common frog): 120945018
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Entry
120945018 CDS
T07929
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
rtem04141
Protein processing in endoplasmic reticulum
rtem04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120945018 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120945018 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
120945018 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120945018 (SEC13)
04131 Membrane trafficking [BR:
rtem04131
]
120945018 (SEC13)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120945018 (SEC13)
Membrane trafficking [BR:
rtem04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120945018 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120945018 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
120945018 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
120945018
NCBI-ProteinID:
XP_040214781
LinkDB
All DBs
Position
7:complement(9305195..9323394)
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AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVVIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDFGLLL
ACGSSDGAISLLTYTGDGPWDVKKITNAHTIGCNAVSWAPSVVPGSLVDQPSGPRPNYIK
RFVSGGCDNLVKIWREEDGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVY
IWTCDDPATNSWNPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESADGLWACIS
DVNKGQGAVSAVTEGQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgtaataaacaccgtggacacctcacacgaggatatgattcatgatgcgcag
atggattattatgggacgcgcctggccacatgctcctccgacagatcggttaagatcttt
gacgtgaagaatggaggacagatcctaatcgctgatctgcggggacatgaaggtccagtc
tggcaggtggcctgggctcacccgatgtacggaaacatcctggcgtcctgctcttacgac
agaaaggtcgtcatatggaaagaggaaaatggcacctgggagaagacgtacgaatacacc
gggcacgattcgtcagtgaactctgtgtgttgggccccccatgactttggattgttgttg
gcttgcggcagttcagatggcgccatatccctcctcacctatacaggggacggcccctgg
gatgtcaaaaagatcaccaatgcacacacgatcgggtgtaatgctgtgagctgggctccc
tctgtggtccctggcagtctggtggatcagccgtctggaccgaggcccaattacatcaag
aggtttgtctctgggggctgcgacaatctggtaaagatctggagggaagaggacggtcag
tggaaggaggatcagaaactggaagcacacagtgattgggtacgggatgtggcctgggct
ccctctattggtcttcccacaagcacaatcgccagctgctctcaggacggaagagtttac
atctggacttgtgacgatcccgccaccaacagctggaaccccaaattgctgcacaaattc
aatgatgtcgtctggcacgtgagctggtccatcaccgccaatatcctggctgtgtctgga
ggagataacaaggtgactctgtggaaggagtccgcggacggcctatgggcttgcatcagt
gacgttaacaagggacaaggcgcagtgtccgccgtgacagagggccagcagaacgagcag
tga
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