KEGG   Rana temporaria (common frog): 120945018
Entry
120945018         CDS       T07929                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03013  Nucleocytoplasmic transport
rtem04141  Protein processing in endoplasmic reticulum
rtem04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120945018 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120945018 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    120945018 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtem03019]
    120945018 (SEC13)
   04131 Membrane trafficking [BR:rtem04131]
    120945018 (SEC13)
Messenger RNA biogenesis [BR:rtem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120945018 (SEC13)
Membrane trafficking [BR:rtem04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    120945018 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    120945018 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    120945018 (SEC13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 120945018
NCBI-ProteinID: XP_040214781
LinkDB
Position
7:complement(9305195..9323394)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVVIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDFGLLL
ACGSSDGAISLLTYTGDGPWDVKKITNAHTIGCNAVSWAPSVVPGSLVDQPSGPRPNYIK
RFVSGGCDNLVKIWREEDGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVY
IWTCDDPATNSWNPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESADGLWACIS
DVNKGQGAVSAVTEGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtatctgtaataaacaccgtggacacctcacacgaggatatgattcatgatgcgcag
atggattattatgggacgcgcctggccacatgctcctccgacagatcggttaagatcttt
gacgtgaagaatggaggacagatcctaatcgctgatctgcggggacatgaaggtccagtc
tggcaggtggcctgggctcacccgatgtacggaaacatcctggcgtcctgctcttacgac
agaaaggtcgtcatatggaaagaggaaaatggcacctgggagaagacgtacgaatacacc
gggcacgattcgtcagtgaactctgtgtgttgggccccccatgactttggattgttgttg
gcttgcggcagttcagatggcgccatatccctcctcacctatacaggggacggcccctgg
gatgtcaaaaagatcaccaatgcacacacgatcgggtgtaatgctgtgagctgggctccc
tctgtggtccctggcagtctggtggatcagccgtctggaccgaggcccaattacatcaag
aggtttgtctctgggggctgcgacaatctggtaaagatctggagggaagaggacggtcag
tggaaggaggatcagaaactggaagcacacagtgattgggtacgggatgtggcctgggct
ccctctattggtcttcccacaagcacaatcgccagctgctctcaggacggaagagtttac
atctggacttgtgacgatcccgccaccaacagctggaaccccaaattgctgcacaaattc
aatgatgtcgtctggcacgtgagctggtccatcaccgccaatatcctggctgtgtctgga
ggagataacaaggtgactctgtggaaggagtccgcggacggcctatgggcttgcatcagt
gacgttaacaagggacaaggcgcagtgtccgccgtgacagagggccagcagaacgagcag
tga

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