Rana temporaria (common frog): 120945033
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Entry
120945033 CDS
T07929
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120945033 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120945033 (MBD4)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120945033 (MBD4)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
120945033 (MBD4)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120945033 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
120945033
NCBI-ProteinID:
XP_040214796
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All DBs
Position
7:10253139..10265970
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AA seq
621 aa
AA seq
DB search
MATGSILDSIKAEPLDISQPLYEDEESQKDDPSEDGTSRVPETLPEGWRKIVTQRKTGKT
AGRHDVYFISPAGTKLRSKTALEKYLNTNHPEIKLEDFDFSVPSQQQRHRKRIVTKFINT
DNGNRSATLSGAQEEHKDCAEDRAVGRPEDRAVGLPEDRAVGLLEDRAVGLLEDRAVGLL
EDRAVGLLEDRAVGLLEDRAVGLPEDRAVGLPEDRAVGLLEDRAVGLLEDRAVGLLEDRA
VGLLEDRAVGLLEDRAVGLPEDRAVGLLEDRAVGLLEDRAVGRPEDTQNTEEDPFIEDEN
DRTPTMKCVGRKRVRSHRKGSEKALRTVARIKRPRKYSSTKPEMAIKTRKHKRKNTVLKK
PKKEESSETDTFSECKLQNSHRQIDCIKVEDPTDLCDPMPVTEDAEDRTSTLPPEQQTEA
EINQMASNTSNDNLLTSSGKSKDSITRSQVEKRKTSHYFSKKATRDAPEPPRRKAFSKWT
PPRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAIPVLWSFLEKYPGAEVARAADWKDM
ADMLQPLGLYELRAKTIVRFSEEYLAKKWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPE
DHKLNNYHDWLWENKDRLGLE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggatctatactggacagtataaaggcggagcctctggacatctcacaacca
ttgtatgaggatgaagaatcacagaaggacgatccctcagaagatggaacttcccgcgtc
cccgaaacacttcctgagggctggagaaagatcgttacacagagaaaaacggggaaaacg
gcggggaggcacgacgtgtattttataagccctgcaggaaccaagctgcgatcaaaaact
gctctagaaaaatatctgaacaccaaccaccctgagataaaactggaagattttgacttc
tcggttccttctcaacaacaaaggcacaggaaaaggattgtcacaaaattcattaatacg
gataatggaaacagatcagccaccctgagcggtgcgcaggaagaacataaagattgtgct
gaagaccgtgcggttggccgtcccgaagaccgtgcggttggccttcccgaagaccgtgcg
gttggccttcttgaagaccgtgcagttggccttcttgaagaccgtgcggttggccttctt
gaagaccgtgcggttggccttcttgaagaccgtgcggttggccttcttgaagatcgtgcg
gttggccttcccgaagatcgtgcggttggccttcccgaagaccgtgcggttggccttctt
gaagaccgtgcggttggccttcttgaagaccgtgcggttggccttcttgaagaccgtgcg
gttggccttcttgaagatcgtgcggttggccttcttgaagatcgtgcggttggccttccc
gaagaccgtgcggttggccttcttgaagaccgtgcggttggccttcttgaagaccgtgcg
gttggccgccctgaagatacacaaaacacagaagaagatccatttattgaggatgagaat
gacagaacgccgacaatgaaatgtgttggccgtaagagagtcaggagccacagaaaagga
tcagaaaaagccttgaggactgtcgccagaataaaacgtccaagaaaatattcttccact
aaaccagagatggcaataaaaacgaggaaacacaagagaaagaacacggttttgaaaaag
cccaagaaagaagaatcgagtgaaacggacacatttagtgaatgtaaattacagaactca
caccggcagattgactgtattaaggtcgaagatcccacagacctctgtgacccaatgcca
gtcacagaagacgcagaagatcggacatccacactgccaccggagcagcagactgaagcc
gagattaatcagatggccagcaatacaagcaatgacaacttactaacgtcttctgggaag
tcgaaggattctatcacaagatcgcaggtggaaaaaagaaagaccagccactacttctcc
aagaaagccacgagagatgcgccggaacccccaaggcgaaaagctttctcaaaatggacc
cctcctcgctcgccctttaatttagttcaagagactcttttccacgacccatggaagctt
ctcattgccactatcttcctgaataagacctccgggaagatggcgatcccggtcctgtgg
agcttcctggagaagtaccccggtgcggaggtcgcccgggcggcggactggaaggacatg
gcggacatgctgcagcccctcggactctatgaactacgagcaaaaaccattgtgaggttc
tcggaagagtatctcgcaaaaaagtggcgttatccgattgaactccacggaattggaaaa
tatggaaatgattcgtatcggatcttctgtgtcaatgagtggaaagaggttcagccggag
gaccacaagctgaataattaccacgactggctctgggagaacaaggacagacttggattg
gaataa
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