Rana temporaria (common frog): 120945056
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Entry
120945056 CDS
T07929
Name
(RefSeq) laminin subunit beta-4-like
KO
K06243
laminin, beta 2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04510
Focal adhesion
rtem04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120945056
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120945056
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Laminin_II
LXG
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
120945056
NCBI-ProteinID:
XP_040214840
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Position
7:12040335..12166712
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AA seq
1841 aa
AA seq
DB search
MTFRRTIWRRERLSFILVALVLVVRGEEPDTIQHGCTNGGCYPATGNLLTGRDNNLGATS
TCGMERSQEYCIVSHLSESEKCFLCDSRVPNQRGSHRIQNVIYLTGPDGEKTWWQSENGV
ETVSIRLDLEAEFHFTHLILKFKTFRPAGMLIERSADFGRTWKVYRYFSYNCTKMFPGVP
VHALQKIDDVICDQRYSDIEPSTEGEVIFKVLDPAIKVEDPYSLEIQELLQITNLRINFT
KLHTLGDNLLDQRAEVLQKYYYSVYELVVRGSCFCYGHASECSPVEGIEGGVEGMIHGRC
VCKHHTVGLNCELCQDFFHDLPWRPAEPDNPHSCKRCNCNNHSTKCHFDMAVYLATGGVS
GGVCDNCHHNTMGRNCELCKPFYYLNPWSDIRAETACIPCDCDPVGSLDGGVCDSHTNVN
LGMIAGQCRCKENVKGERCDSCKENFFGLSRNDPLGCQPCQCDPRGIVAGNGPCDQISGD
CYCKRFVTGRYCNQCLPEFWGLSNDMMGCRPCNCDFGGAYNNRCSLEDGQCECRSNIIGR
ECGEAQPGYFCMPLDYYTYEAENAKGLSPTDPQTPGNPKPESQTDCVEYYNAIQNGKKVR
LRRHRRTIRVLQQKAAKRRARQLQQRADIEIIRREHSPDHMITWTGPGFARVRDGAGLLF
HIDNIPYPMDYDIMIRYEPESAEDWEAIVSVTSQILPMSPRCGNVLPSEQMYREKLPHSE
RYLVLSKPFCFENNNQYEISIRFQRLEATNRQPGSFILVDSLVLLPKVFELPGFHGNDPV
STHHREEMETYRCLESFQMATMPVLAEMCIKLLCSISAIVHNGALPCLCDLQGSLSAVCN
KIGGQCMCKPNVIGQRCDQCAPGTYGFGPYGCSKCDCDSQGSLSRFCNPVTGQCQCHSSV
AGRQCNQCLPGQWGFPHCKPCQCNGHSEDCDPRTGACTSCRDFTSGRHCEKCLDGYYGDP
ILGTGQQCRPCPCPGYPGTQNYHGSSCYADRDSSHIVCLCAPGYTGSRCDRCSPGYFGNP
DQDGGECRPCQCNNNIDPTDPEACDSRTGMCLTCLHNTDGHHCGECKAGYFGSAILRNCR
RCTCNELGTLHSHCTRNTCYCDRVTGHCPCRANVIGKNCDQCAPNYWNLGADLGCEACAC
LPEHSLRQDCNVYTGQCHCQPGFGGRVCSQCQENFWGDPKRRCEACNCDGYGSEIRQCDH
HTGMCHCREGFTGQRCNQCARGFRDNYPRCSACHQCFYQWDATISELQNQLRVIQKKVSD
LQDGVEAPELSNSLIKDLDDKLRIIKQIIGQGTIEGTRMLEQMNKLVNKIRTEVAQLSFK
LHSQEKRMNDTMTKDGRQKEKLDKLNIELSLLNVTVVKLKTQTEAIAASGFNETYGSILK
AYLDSTAAERLANDSVYGPDSPVSHSKETRDETERLLKEKLDIYRRNMTAHRTSLKELQK
KAKDLNVFKINEKICGAPGDKPCDQAPCGGANCKDGQGKRKCGGENCNGALPISAKALAS
SQNVKVDLENMATQLNDISEKIQEVQNIAQEAKVQSEFTLNKAKDTKRRIEDSTEKLRAF
IKKIKDFLTEEGADPESIELVARQVLNISLPASPGDIAALIKQITESIGNLSGVDMILNV
TSEGVNTAKLLLQKAVEARERADGVSVNIGETKSLLDEAGNKAKVAEKALNATKESIRRL
KNMVDNSLENLTGVEAKENSIMDRLTKLAEEVEALMKKVDSNRQMANEANQKATNAMLAT
DGLDKEMEEVKKNYRDLKDKVGGVDTSSGSAMQKVQQIKDEAQGLLKKATDAKEKLDKLE
QKFKDNEENMSKKMEELQDLENRTMVLLNFIREKSNVYATC
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgactttcaggagaacaatatggcggcgggaacggctgtctttcatccttgtcgctctg
gttctggttgtacggggtgaagagccggacacaatacaacacgggtgtaccaatggagga
tgctaccccgccacaggaaaccttctcactggtcgagacaacaacctcggcgccacatcc
acgtgtggaatggaaaggagccaggagtactgcattgtcagccatctatcggaatcggag
aaatgtttcctctgtgactcccgggtgcccaaccaaagggggagccacaggattcaaaat
gtcatttacctgacaggacccgatggagagaagacatggtggcaatccgagaacggagtg
gaaacagtgagcattcggctcgatttggaagcagaattccattttacgcatctcatcctg
aaattcaagacgttccgaccggccggcatgctgatcgagaggtcggcagattttgggcgc
acttggaaagtatatcggtatttctcctacaattgcaccaaaatgttccccggggtcccg
gttcatgccttgcagaagattgatgacgtgatttgtgatcagagatactcagatattgaa
ccgtccacggaaggagaggtgattttcaaagtccttgatccagctatcaaagtagaagat
ccctacagtttggagatacaagagctccttcagattacgaacttgaggatcaatttcacc
aagcttcacacgttgggggacaacctgttggatcagagggcagaagtcctacagaagtat
tattactcggtgtacgagttggtggtccgtgggagctgcttctgttacggacatgcctcg
gagtgctcccctgtggaagggattgaaggaggagtggaaggaatgatccacggccgatgt
gtctgcaaacatcacacggtgggtctgaactgtgagctgtgccaggacttcttccacgat
cttccctggagaccagcggaacccgacaacccccattcctgcaaaagatgcaactgtaac
aatcactccacaaagtgccactttgacatggcggtgtatctggccaccggaggggtgagc
ggaggcgtatgtgacaactgtcaccacaacaccatggggcgcaactgcgagctgtgcaaa
cctttctactacctgaacccctggtctgatatccgggcagagacggcctgcatcccctgt
gactgtgatccggtgggctccttggatgggggggtctgcgacagccacaccaacgtcaac
cttggtatgatcgcagggcaatgccgctgcaaggaaaatgtaaaaggggagcgatgcgac
agctgcaaggaaaacttctttgggctcagcagaaacgaccctctggggtgtcagccatgc
caatgtgatcctcgtgggattgtggcgggtaacggtccctgtgaccagattagcggtgac
tgttactgtaagagatttgtgacggggagatattgtaaccagtgtctgcccgagttttgg
ggtctcagcaatgacatgatgggatgtcggccttgtaactgtgattttggaggtgcttat
aacaacaggtgttccctggaggacggtcagtgtgaatgtcgatcgaacatcatagggcgt
gagtgcggggaggcgcagcctggatacttctgcatgccgctggattactacacatatgaa
gcagagaacgccaaggggctctccccaactgacccccaaactccgggtaaccccaaacca
gagtctcagacggactgtgtggagtactacaacgccattcagaatggaaagaaagtgagg
ctacgccgacaccgaagaaccatccgcgtcctgcaacagaaggcggccaagcgaagagcg
cgccaactgcagcaaagggcagacattgagatcatccgccgtgaacactctccggatcac
atgatcacctggaccgggcctggcttcgctcgagttagagatggcgctggcctcttgttt
cacatcgacaacatcccataccccatggactatgacatcatgatccgatatgagcctgag
tcagcagaggattgggaagccatcgtcagcgtgacgtctcagatattacccatgagcccc
cgctgcggcaatgtgctgccctctgagcaaatgtatagagaaaaactgccacattcagag
aggtatctggtcctctcgaagcccttttgctttgaaaataacaaccagtatgaaatcagc
atccgcttccagcgtttggaggccaccaatcgacagccaggatccttcatcctcgttgat
tcgctggtccttctgcccaaagtctttgaactgcccggtttccatggtaacgaccctgta
tccacgcaccatcgagaagaaatggagacctacaggtgcctggagtccttccagatggcc
accatgccggtcctggcagagatgtgcatcaagctgctgtgtagtatctccgccatcgtc
cacaacggagctctgccctgtctgtgtgatttgcaaggctcgctcagcgcagtgtgcaac
aaaatcggagggcagtgtatgtgtaagcccaacgtgattggccagcgctgtgaccagtgc
gctcctgggacctatgggtttggcccgtatggatgcagcaagtgtgactgcgactctcag
ggctccctctcccggttctgcaacccggtaacgggtcagtgtcagtgccacagcagtgtg
gccgggagacagtgcaaccagtgccttccgggacaatggggcttcccccactgcaagccc
tgccaatgtaatggccactccgaggactgtgaccccaggaccggagcctgcaccagctgc
cgagatttcacgagcgggcggcactgcgagaagtgtctggatggctactacggagatcct
attcttggcactggccagcagtgccgtccctgtccttgtcctggctatcccggtactcaa
aactaccacggcagttcctgctacgcggaccgagactccagccatatcgtgtgcctgtgc
gctcctggctatacaggttcacggtgtgatcgctgctcccccggttactttgggaacccg
gaccaagatggcggagaatgtcgcccttgtcagtgtaacaacaacatcgatcccaccgat
cccgaagcatgtgactcgaggaccggcatgtgcttgacttgtctccacaacactgatggg
catcactgcggagagtgcaaagctggttatttcggcagcgccattctgcgcaattgccgg
cgctgtacctgcaatgagctgggcaccttgcattcccactgtacaaggaacacctgctac
tgtgacagggtgactgggcactgcccttgccgggcgaatgtcatagggaagaactgcgat
cagtgcgcccccaactactggaacctcggagcggacctgggctgtgaggcgtgcgcctgc
ctgccggagcattccctgagacaggactgcaatgtgtacacagggcagtgccactgccag
cctggcttcggagggagagtctgctcacagtgccaggagaatttctggggtgatccgaaa
agaagatgtgaagcttgtaactgtgatggctacggttcagagatccgacagtgcgatcac
catacaggaatgtgccactgccgggaggggtttaccgggcagcggtgtaaccaatgcgcc
agaggcttccgggacaattatcccaggtgttccgcctgccaccagtgcttctaccaatgg
gatgccaccatctccgagctccagaaccagcttcgggttatacagaagaaggtgtccgac
ctgcaggacggagtggaagctcctgagctcagtaacagcctcatcaaagatctggacgac
aaactcaggatcatcaagcagattatcgggcaggggaccatcgaaggcacacgcatgctg
gagcaaatgaacaagctggtcaacaagataaggacggaggtggcccagctctccttcaaa
ctgcattcccaggagaagaggatgaatgacaccatgaccaaagacggaaggcaaaaggag
aaactggacaagctgaacatcgagctcagcctgctcaatgtgaccgtggtcaaactcaag
acgcagacagaagccatcgcagcctcagggttcaatgagacatatgggagcatcttgaag
gcctatttagattccacagctgccgagagacttgccaatgactctgtatatggacctgat
agtcccgtgagccactcaaaggaaacacgagatgagacggagaggcttctgaaagaaaaa
ctggacatttaccgaaggaacatgacagcccatcggacctcgctgaaagaactgcagaag
aaggccaaggatctcaatgtctttaaaataaatgagaagatttgtggagctccgggggac
aagccttgcgaccaggctccatgtggtggagccaactgcaaggatggccagggcaagagg
aaatgtggtggagagaactgtaatggagctctgccaatctcggcaaaggccctcgcatct
tcccagaatgtcaaagtggacctggaaaacatggccacccagctgaatgacatctctgag
aagatccaggaagtccaaaacattgcccaagaagccaaagtgcaaagtgaattcaccttg
aacaaagccaaagacaccaagcggagaattgaagactctacagaaaaactcagagctttc
atcaagaagattaaagatttcctaactgaggaaggagctgacccagagagcattgaactg
gtagcaaggcaggtgctgaacatctcactcccggccagtcctggagatatcgctgctctc
atcaaacagatcaccgagagcattggtaacctcagcggggtggacatgatccttaatgtt
acatcggagggcgtaaatactgccaaactgctcctgcaaaaagctgtggaggccagagag
agagctgacggggtgagcgtaaacattggcgaaaccaaatctctgctggacgaggccggg
aacaaagcgaaggtcgcagagaaggcgctgaatgccaccaaagagagcatcagaaggttg
aagaacatggtggacaattccttggaaaatcttactggtgtggaggcgaaggagaactcc
ataatggatcgtttgaccaagttggccgaggaggtagaagctttaatgaagaaagtggat
tccaacagacagatggccaacgaagcaaaccaaaaggccaccaatgctatgctggccaca
gacgggcttgacaaggagatggaagaagtcaagaagaactacagagacctgaaagacaag
gttggaggagtggacacctcctcggggtcagccatgcagaaagtacagcagataaaagac
gaggctcagggcttgctaaagaaagcgacggacgccaaggagaagctagacaagcttgag
caaaagttcaaagacaatgaagagaacatgagcaagaaaatggaggaacttcaagacctg
gagaatagaacgatggttttactgaattttatcagagaaaagtccaatgtctacgcaact
tgttag
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integrated database retrieval system