Rana temporaria (common frog): 120945113 Help Entry 120945113         CDS       T07929                                  Symbol PLXNA1 Name (RefSeq) plexin-A1 isoform X1   KO K06820   plexin A Organism rtem  Rana temporaria (common frog) Pathway rtem04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:rtem00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     120945113 (PLXNA1) SSDB OrthologParalogGFIT Motif Pfam:  Plexin_cytopl Plexin_RBD TIG TIG_2 PSI Sema TIG_plexin PSI_PlexinA-B PSI_integrin Motif Other DBs NCBI-GeneID:  120945113 NCBI-ProteinID:  XP_040214919 LinkDB All DBs Position 7:17153542..17614144 Genome browser AA seq 1903 aa AA seqDB search MMTQTWRSLPLHLWTVLFLGVSWILPGNGYPKPFRTFTGSEWSLTHLVVHNKTGEVYLGA VNRIFKLSSNLTLLRTHVTGPIEDNEKCYPPPSVQSCQHGLVTTNNVNKLLLVDYTLDRL IACGSASQGICQFLRIGDLFKLGEPHHRKEHYLSSINESGTMSGIIIEAPNGQNKLFVGT PIDGKSEYFPTLSSRKLLPSEENAEMFGFVYQDEFVSSQLKIPSDTLSKFPTFDIYYVYS FRSEQFVYYLTLQLDTQLTSPDSTGEQFFTSKIVRLCVEDPKFYSYVEFPIGCMKDGVEY RLIQDAYLSKPGKRLAKELGISEREDILFTVFAQGQKNRIKPPKESVLCLFTLKKIKDKI KERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDNFCGQDFNQPLGGTVTIEGTPLFVD KEDGMTSVAAYDYRGHTVVFAGTRSGRIKKILVDLSSPFPHASQQYENVLVHEGNAILRD LVLSPERQYIYAISEKQVTRVPVESCEQYETCDTCLGSRDPHCGWCVLHNTCSRKDKCER ADELHRFTTDQRQCVQLTVHPKNISVTVSEVPMVLQAWNVPDLSTGVNCSFEDFTEMEGH IEEGKIYCNSPSAKDVIPITRGQGDKRVVKLYLKSKETGKKFASVDFVFYNCSVHQSCLS CVNGSYPCHWCKYRHVCTHNAADCSFLEGRVKMSEDCPQILPSTQIYIPVGVVKPITLTA KNLPQPQSGQRNYECIFHIPGSVTRVTALRFNSTSIQCQNTSYNYEGNDVSDLPVNLSVV WNGHFVIDNPQNIQAHLYKCSALRESCGLCLKSDPRFECGWCVSEKKCTLRQNCPMYENP WMHVSTPQSRCTDPKITKLFPETGPRQGGTRLTIIGENLGLRFDDIRFGVRVGQVMCVPL ESEYISAEQIVCEIGEARITQAREATVEVCIRDCSKDYMTAAPKSFTFVSPHFNRVTPAR GPLSGGTWITIEGTNLNAGSDVSVEIGGRPCTFSWRTAKEIRCKSPQGQIPSSAEIQIHI NRAVLRNPEVKYNYTEDPTVQKIEPEWSITSGGTPLIVSGLNLATIREPKIRAKYGEVER ENNCTVYNDTTMVCLAPSIENPLRIPPEFGDKPDEIGFIMDNVQALLIVNMTSFTYYADP VFEPLSPSGNLELKPSSPLIIKGRNILPSVPGNFRLNYTVLIGDTPCALTVSETQLLCES PNLTGQHKVTIKAGGFEFSPGTLQIYSDSLLTLPAIIGIGGGGGLLLLIIIIVLIAYKRK SRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTNDLDGAGIPFLDYRTYAMR VLFPGIEDHPVLKEMEVQANVEKALNLFGQLLNKKHFLLTFIRTLEGQRSFSMRDRGNVA SLIMTGLQGEMEYATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLY KFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKMLNLCDGGL SDESWCRSPQTLNCVNPENENAPEIPVKVLNCDTITQVKEKLLDAVYKGVPYSQRPKAGD MDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVIDGSSVALVPKQNSAYNISNS STFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHLDQREGDRGSK MVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHQITD YDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGK DSPSNKLLYAKDIPNYKSWVERYYADIAKMPVISDQDMSAYLAEQSRLHLSQFNSMSALH EIYSYITKYRDEILTALEKDEQARRQRLRSKLEQVIDTMSQSS NT seq 5712 nt NT seq  +upstreamnt  +downstreamnt atgatgacccaaacgtggaggtctcttcctttgcatttatggactgtcttgtttttgggg gtctcctggattcttcccgggaatggttaccccaagccatttagaacttttacgggcagt gaatggagcttgactcatttggtggtgcataataaaaccggggaggtatacttgggggcc gtgaacaggattttcaaactgtcaagtaacctgaccctcttgcgcactcatgttacgggt cccattgaagacaacgaaaagtgttaccctcctcctagcgtccagtcttgtcagcatgga cttgtcaccactaataatgtcaacaagctgctgctagtggactacactttggaccgttta atagcctgtggcagcgcctctcaggggatctgtcagttcctacgtataggggacctcttc aaattgggagaacctcatcatcgtaaggagcactacctctccagtattaatgagtctggc accatgtctggaatcattattgaggctcctaatgggcagaacaaactttttgttgggaca cctatagatggaaagtctgaatattttcccactctctctagtcggaagcttctgcccagc gaggagaatgcagagatgtttggctttgtctaccaggatgagtttgtatcttcacaactt aagattccctcggacacgctgtccaaatttccaacttttgacatatactatgtgtacagt ttcagaagtgagcagtttgtctactacttgaccctacaattagatacacagttgacttct cccgattctaccggagagcagtttttcacatctaaaattgtccggctttgtgtggaagac cccaaattctactcttatgtggaattccctatcggatgcatgaaagatggtgtggaatat cgtctcatacaggatgcttacctgagcaagcctgggaaacgcctggccaaagagttgggg atctccgagagggaagacattcttttcactgtctttgcacagggtcagaaaaatcgaatc aaaccaccaaaggagtctgttctttgccttttcaccttgaagaagatcaaggataaaatt aaggaacgtattcagtcctgctaccggggcgaaggaaaactctctctgccttggctttta aacaaagagctgggttgcatcaactcgcccctgcagattgacgataacttctgcggtcag gactttaatcagcctttaggaggtactgtcaccattgaaggaaccccgcttttcgtcgat aaggaggatggtatgacgtcagtagccgcctatgactatcgtggacacacggtcgtgttt gctggcacccgcagtggcaggataaaaaagatcttggtcgacctgtccagcccattcccc cacgcctcccagcagtatgagaacgtactggttcacgaaggaaacgccatcctcagggac ttggttctcagccccgaacgccagtatatctacgctatatctgagaagcaggtgacgcgg gtgccggtggaaagctgtgagcagtatgagacttgtgacacctgcctgggctcccgggac cctcactgcggatggtgtgtgctgcacaacacgtgttctcggaaagacaagtgtgagcgg gcagacgagcttcaccgcttcaccaccgaccagcggcagtgcgtccagctgacggtgcac cccaagaacatctcggttaccgtgtctgaggttccgatggttttacaagcctggaacgtc cctgacctctccaccggggtgaactgctccttcgaggatttcacagagatggagggacac atagaggaaggcaagatctactgcaactctccttccgccaaggacgtgatccccatcaca cgaggccagggtgacaagagagttgtgaaactttatctgaagtccaaggagaccgggaag aagtttgccagcgtggattttgtcttttacaactgcagcgtccatcaatcatgcctgtcc tgtgtgaacggatcgtacccctgccactggtgcaagtaccggcacgtgtgtacccacaat gcagcggactgctccttcctggagggccgggtgaagatgtcagaggactgtcctcagatt ctgccttcaacccaaatctacatccctgttggagtggtgaaacccatcacactgaccgcc aagaacctcccgcagccgcagtcgggccagcgcaactacgagtgcatcttccacatcccg gggagtgtgacccgcgtcaccgctctgcgcttcaacagcaccagcatccaatgtcagaac acttcgtataactacgaagggaatgatgtcagcgacctgcccgtcaacctgtctgtggtc tggaacggccattttgtcattgacaatcctcagaacatacaagcccacctttacaagtgc tcagccctgcgggagagctgcggattgtgtctgaaatcggatccgcgattcgagtgcggc tggtgcgtcagcgagaagaagtgcaccctgcgccagaactgccccatgtatgagaacccg tggatgcatgtcagcacgccgcagagccggtgcaccgaccccaagatcaccaagctcttt cctgaaaccggccctaggcaaggaggaacccggctcaccatcattggcgagaacctcgga ctgaggtttgatgacatccggttcggtgtgagggtcgggcaagtcatgtgtgtcccccta gaaagtgaatacatcagtgcagagcagattgtgtgtgagattggagaggccaggataacc caagctcgtgaggccaccgtggaagtctgtatcagagattgctccaaggattacatgacc gctgctccaaaatctttcacctttgtgagtcctcattttaatcgtgtgacccctgcccgc ggcccgctctctggaggtacctggattactatcgagggaaccaatctgaatgctggcagt gatgtgtctgtggaaattggaggaagaccctgcaccttttcatggagaacagccaaagaa attcgctgtaaatccccgcagggacagattccatccagcgcggaaattcagatccacatc aatcgcgctgtgctgcgcaaccccgaggtgaagtacaattacacggaggaccccacagtg cagaaaatcgaaccagagtggagcatcaccagtggtgggactccactgattgtgtccggt ctgaacctggcaactattagggaaccgaagatccgcgcaaaatatggcgaggtggaacgt gaaaataactgtacggtttataatgacactaccatggtttgtctggccccttccatcgaa aaccccctgagaattccgccggaattcggagacaaaccagacgagatcggcttcatcatg gacaacgtccaggcgctgctcatcgtgaatatgaccagcttcacgtactacgctgaccct gtgtttgagcccctcagtccatccgggaacctagagctaaagcccagctctcctctaatc atcaagggtcgtaatatattaccatccgtacctgggaacttccgtctcaactatacagtc ttgattggcgacaccccatgcgccctaaccgtgtctgagacgcagcttctgtgcgaatcg ccaaaccttacaggacaacacaaagtcacgatcaaagccggaggatttgaattctcaccc ggtactctgcagatctattccgacagcctcctgacccttccggcaatcattggcatcggt ggaggtggtgggctcctcttgctaatcatcatcatcgtgctgatcgcctacaagcgcaaa tcgagggatgcagaccgcaccttgaagcgtttgcagctgcagatggacaatctggagtcg cgggtggccctggaatgcaaagaagcctttgctgagctgcagactgacatccacgagctg accaatgacctggacggagccggaatccccttcctggactatcgcacctacgccatgcgt gtcctcttccccggcattgaagaccaccctgtgctgaaggagatggaggtccaagccaat gtagagaaggctctgaatctgtttgggcagttactgaacaagaagcatttcctcctgacc ttcatccgcactctggagggtcagcgcagcttctccatgcgagatcgcggcaatgtggcc tcactcatcatgacgggactgcagggggagatggaatacgccacgggggtcctcaaacag ctcctatctgacctcattgagaagaaccttgaaagcaagaaccaccccaagctattgctc agaaggacggagtctgtggcggaaaagatgctcacaaactggttcacctttcttctctat aagttcctaaaggagtgcgctggagaaccgctcttcatgctgtactgcgccatcaagcag cagatggagaaagggcccattgacgccatcacaggagaagctcgatattccctgagtgag gataagctcatccgccaacagatcgactacaagatgctgaatctttgcgatggcgggctg agcgatgaatcatggtgccgctcgcctcaaacgctcaattgtgtcaatccggagaacgag aatgccccggagatcccggtgaaggtgctgaactgcgacaccataacgcaagtgaaggag aagctgctggatgctgtatacaagggggtcccgtactctcagcgacccaaagccggagac atggacctcgaatggcgccaaggcagaatggccagaatcatactacaggatgaggatgtg acaacaaaaatagacaacgactggaagcgcctcaacacactggctcattatcaggttatc gatgggtcttcggttgcactggtccccaaacagaactctgcttataacatctcaaattcc tcaacgtttacaaagtctctgagcagatatgagagcatgctacggacagcgtccagcccc gacagcctgcgttcccgaacccctatgattaccccagatctggaaagcggtacaaagctc tggcacctagtcaagaaccatgatcacctggaccaacgtgagggagacagagggagcaag atggtgtctgaaatttatctcacccgcttattggcaacaaagggcactctccagaagttc gtagatgatttgtttgaaaccatatttagcacggcacatcgcggcagcgcactacctctc gccatcaaatatatgttcgactttctggatgagcaggcggataagcaccaaatcacagat tacgatgtgcggcacacatggaaaagtaattgtttacccctgaggttctgggtcaatgtc atcaagaaccctcagtttgtgttcgacatccacaagaacagcatcacggatgcctgcctc tcagtggttgcccagaccttcatggactcttgttctacgtcagagcacaagttgggcaaa gattctcccagtaacaagctgctttatgccaaggacatacccaactacaagagctgggtg gagaggtattatgctgacatcgccaaaatgcccgtaataagcgaccaggatatgagtgca tacctggcggagcaatcaaggctacacctgagccagttcaacagcatgagtgccctacat gaaatatactcctacatcactaagtacagagacgagatcttaaccgcgctggaaaaagac gaacaagcgaggaggcagcggctacgaagtaaattggaacaagttatcgacacaatgtcg cagagcagttga

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