Rana temporaria (common frog): 120945253
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Entry
120945253 CDS
T07929
Symbol
DCP1A
Name
(RefSeq) mRNA-decapping enzyme 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120945253 (DCP1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120945253 (DCP1A)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120945253 (DCP1A)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120945253 (DCP1A)
mRNA degradation factors
5'-3' decay
Decapping complex
120945253 (DCP1A)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120945253 (DCP1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
120945253
NCBI-ProteinID:
XP_040215206
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All DBs
Position
7:42745466..42814656
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AA seq
558 aa
AA seq
DB search
MVHQPECRCKMESRCKVEHEMSLAALRRSDPYISGIVDVTGQVALYIFSAKANEWEKTDI
EGTLFVYTRSASPHHGFTIMNRLNMHNLVEPVNKDLEFQLHEPFLLYRNSSLSIYSIWFY
DKHDCQRIAKLMAQVVQQETEMAKQRKSPINGCRSQSIDILEMLSKAKNEYEKGQGNDIG
ASFSTVKNSPLVKADSLEMAEHGSSAPQEKVFQTIHKHLTVEELFGTSMAKDPPVLAHSN
LEVAEPFLADLGEHNTILQPKTIQPVVVKAEPRSFNCSASDFSHPDCLPPSFICKGQVSS
VNSQKVSTFPVCISPHLGSSSEVLSTSVSHGPSIAQVNRMSPLMSQLVSDVVSAPHGQPL
IPPLVPIRSSSFSSSSHPSMDLLHKLKLTPQADSLQSQPNNKTTIAPKFSSTASQLATPE
SFKESSLKALSSGSLLIPSLQNAHEKREPESFAQPLGVSKVVAAPQYAAHTGTEATSVLW
SPSVFQQPPPKHTGQADRTGTPPLMHHSVDRTRPGPALSRAQLQETLLHLLKNDSSFLNT
VHEAYLQVLTKSMDNVKL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaccagccggagtgtcgatgcaagatggagtcgcggtgtaaagtggagcatgag
atgagtttggcggctctgcgccgctcggacccgtacatcagcggcattgtggatgtcacc
ggacaggtggccctgtacatcttcagtgctaaggccaatgagtgggagaagaccgacata
gaagggaccttatttgtttatacaagatcagcatctccgcaccatggctttacgataatg
aaccgccttaacatgcacaatttggtggagcctgtcaacaaagatctagaatttcagctt
catgaacctttcttgctgtaccggaactccagtttgtccatttacagtatctggttttat
gacaagcatgactgccagaggattgcaaagctgatggcccaagtggtacagcaggagact
gaaatggcaaaacagcgaaaaagtccaattaatggttgcagatcccaatccattgatatc
cttgagatgttgagcaaggctaaaaatgaatacgaaaagggtcaagggaatgacatcggt
gccagcttcagcacagtgaagaactctccactagtgaaggcagacagcttggaaatggct
gagcatggatcctctgctcctcaggagaaagttttccaaactatacataaacacttgacc
gtggaagaactttttggaacttcgatggcaaaagatccaccagtgcttgcccactctaac
cttgaagttgcagagccctttctagcagatttaggggaacacaatactatcctacagcca
aagacaatccagccagtggtggtgaaagcagaaccaagaagttttaattgtagtgctagt
gattttagtcacccagattgccttccaccatcattcatttgtaaaggacaagtatcttca
gtgaactcccaaaaagttagtacatttcctgtatgtattagtccccatcttggctcatca
tcggaagtcctgagcacctctgtttcacatggacccagtattgcacaagttaaccgaatg
tccccccttatgagccaattggtatcggacgttgtcagcgctcctcatggtcagcccctc
attccacctttagtgccgatccgtagtagcagcttctccagttcatctcaccccagcatg
gatcttctacacaagttaaagctgactccacaggctgactctttacagtctcagcccaac
aacaagactaccatagcgcccaagttctccagtactgcaagtcagctggcaacacctgag
agtttcaaagaaagctccctgaaagcattgtcatctggatctctgttaataccttctctt
cagaatgctcatgaaaagagggaacctgaatcatttgcccagcctttgggtgtatccaag
gtggtagctgctccccagtatgctgcacatacaggtactgaagccacatctgtcctgtgg
tctcccagtgtattccagcaacctcctcctaagcacactggtcaggcagaccggaccggt
actccacccctgatgcatcacagtgtggatcgcacgagacctggccctgcccttagccgt
gctcagctccaggaaacccttttacaccttctgaagaatgactccagctttctcaataca
gttcacgaagcttatttacaagtgcttaccaaaagtatggacaatgtcaagctataa
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