Rana temporaria (common frog): 120945311
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Entry
120945311 CDS
T07929
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120945311 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
120945311 (NISCH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
PH_PLEKHM2
LRR_NXF1-5
Pam3_Gp34
Motif
Other DBs
NCBI-GeneID:
120945311
NCBI-ProteinID:
XP_040215335
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All DBs
Position
7:complement(54673105..54790402)
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AA seq
1400 aa
AA seq
DB search
MEGLAGFMEDSDEHRAVAIVGSELVENYTVYIIEVQTGVYNWKVKHRYSDFYDLHEKLTA
ENKIERNLLPPKKIIGKNSRSLVEKRQKDLEVYLQTLLAKFPVTVPRALSHFLHFHLYEI
HGIAAVLAEELYHNGEQLLVAGEVFHMRPLQLYAITQLLRHGKPTCINGDAKTDLGHILD
FTCRLKYLKISGSKGPVGTSNIQEHLLAYDLSVFKSLCQVEICHSDAKLIKGFTSCKKTL
ETMTVQFSASSMKDILVPEALEFDHWEAEGATSDCPITAVVPKWSTLTTVDMSHNQISCI
DDSVKIAPQIEFLALSHNIITSIENLQHLYNLVHLDLSYNKLSGLEGIHSKIGNIKTLNL
AGNLLESLKGLNKLYSLVNLDLSNNKISQVDEIKNIGNLPCLETVNLTDNNVTIIPDYRT
KVLAQFGDRAAEVCLDNTATTEKELDTVEVLKAIQKAKEAKNKLNNTDKKMSEDFRLTAS
SSSFLANASSPVSGTVISSQDQSTDSKSTNLTLDDHSQRKGGIQCSAHNKGTSREPSKPD
VVLQNDDNNLHVVSLITLEEEPTLLPELHCSHFPIPCVSNTDTDQDFIPYFSTSIAHALK
QKQHLAGKLETSNNQRVGSCEPGDGYFEMGLHENDHSVEWNLSERTPSCPQDTNISIVRL
LWNFSVHLQGDNNVKPFSSCLVLTDTLIALFEVHLEEPEKSHSSIPSLLKLVCYFYYEDV
TEFGVLIPDTCLALNIRNGEEYIVIVTDSKNLEEFSSCLHEQCSQNSISLPSVSVTSFEA
GLQSFFQRLVEKHKINVEDCEVKGFFPVCLLYHDDLFKRNTQGELQNKNSRCTDLSSTPF
CIMKLNSNHNTENVLPVWLFFTQQDMIMVQIDYHMVSRNKKLSDCSQNVFSLRRVPLASI
VVHPMCQSAGENHSLQEGHVLQIILDSMSMTAFFVLPQDKSRFLNLYKLLRTSLHDFKNV
VILKALMNLKSTQCNLLETKKTHLQTVGTIKPSMTLPTTYPSQSLQHKLSEENQIPFHLP
ASEPLQFIAALTGKSVVEFFHNSVSEDENEELRHLMWSSLSFYRTPDMEITSCVLLSTKA
VYFVLDDAIKKINQIPLNSCNQNDVGLENSLFHHCCCIVIKFSDLQSVNIGLFDQYFRIT
GPSPNHVITLLTRDSYTTHAFIQQLMSVLSLLARTPSPEPVEKDFYSEFGNKRTGTMENY
EMIHSSRVKFIYPNEEEIGDLTYIVTESTDSPGTLPSLNILLYVLAFQVSTAEGSDQEAL
LQPKTLILTSSDLFLFNEDYISYPLPDFAKEPPKKDKYQLVDGRRIRDLDRVLMGYQTYP
QTLTFVFDDSSNQDLMQSLSMDHFAETLSPCNSQKTCGNNQEVQWYIFIPSADCREKLIS
LLARQWEILCGRELPLELTG
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggaggggctggcgggcttcatggaggacagtgacgagcaccgggcggtggccattgtc
ggctccgagttagtggagaattacacggtatatatcatcgaggtccagactggtgtttat
aactggaaagttaaacatcgttacagtgacttttatgatctccatgaaaaactaacagca
gagaacaaaatcgaacgaaatttgctgcctcctaaaaagatcattggaaagaattccaga
agcttggtggaaaagcgtcagaaggatctggaggtctacctacaaacgctgcttgcaaag
tttccggttactgttccaagagctttgtcccattttttgcactttcacttatatgaaatt
catggaattgctgctgttctggcggaggagctttatcataatggtgagcaattacttgta
gcgggagaagtgtttcacatgagacctctacagctgtatgccataacacaattgctacga
catggcaaaccaacctgtattaatggagacgccaaaactgaccttgggcacatacttgat
tttacatgtagacttaaatatttaaagatcagtggttcaaaaggtccagttggaacaagt
aatatacaagaacacctattggcgtatgatctatcggtatttaaatcactttgtcaagta
gagatctgtcattcagatgcaaagcttatcaaaggcttcacctcctgtaagaagacactg
gaaactatgactgttcagttttcagcatcatcaatgaaggatatcctggtgccggaggct
cttgaattcgatcattgggaggcagaaggtgcgacatcagattgtcctataacggctgta
gtgccaaaatggagtacgctgaccactgtggatatgagccacaatcagatctcttgtatt
gatgattctgtgaaaattgctccacaaatagagttcctggccttgagtcataacatcata
acctccatagaaaatctgcagcacttgtacaacttggttcacttggatctgtcctacaac
aaactctctgggctggaaggcattcactcaaagattggaaatataaaaacgctaaactta
gctggaaacctgttggaaagtctcaaggggctcaataaattatattctctggtcaacctg
gatttaagcaacaacaagatctcacaggttgatgaaattaaaaatattgggaatcttcca
tgcttggaaactgtgaatctgaccgacaacaatgtgactattatccctgattacagaaca
aaagttcttgcacagtttggggacagagccgcagaggtttgtttggacaatactgctaca
acagaaaaagaactagacacagtggaagtgctgaaagcaatccagaaagcaaaggaagca
aaaaataaactgaataatactgataaaaagatgagtgaggacttccggctcactgcttcc
agctcttcttttctggcaaatgcttcttcccctgtctctgggactgttatctccagtcaa
gaccagtccacagacagcaaatccactaatctgacgctcgatgatcattcacagagaaaa
ggtggaattcaatgttctgcacacaataaaggaacaagcagagagccatccaaaccagac
gtagttttacaaaatgatgacaacaatcttcatgtggtcagtctaattacgctagaagag
gaacctacactattaccagaacttcactgctcccattttcctataccctgcgtctcaaat
actgacactgatcaagattttattccttacttttccacatcaattgcccatgcactaaag
cagaagcagcatctagctggaaagctggagacaagtaataaccaaagagtgggctcttgt
gaaccaggggatggctactttgaaatgggacttcacgagaacgaccatagtgtagagtgg
aatctgtcagagagaactccttcatgtcctcaagacacaaatatcagtattgtacgatta
ctttggaacttctctgttcaccttcagggagacaataatgtcaaaccattttcatcatgc
cttgtgttaactgacactttaattgctttgtttgaggtccatctcgaagagccagaaaaa
agccacagttccattccatctttacttaaactagtttgctatttttattatgaagatgtc
actgaatttggagttctaataccagacacatgcttggcgcttaatataaggaatggagag
gagtacatagttatagtaacagactctaaaaacttggaagaattttcttcatgtttacac
gaacaatgttcacaaaacagcatttcactgccatccgtctcagtcacgagtttcgaagct
ggactccaaagtttctttcaacgtcttgtagagaaacacaagataaatgtagaagattgt
gaggttaaaggttttttcccagtgtgtttgctttaccatgatgacctttttaagaggaac
acccaaggagaactgcaaaacaaaaactctaggtgcacagatttgagttctacacctttt
tgtatcatgaagctcaactctaatcacaatactgagaatgttctgccggtttggttgttc
tttactcaacaagatatgatcatggtccaaatagattatcatatggtctctaggaataaa
aaactgtctgactgttcccaaaatgtcttcagcctgagaagagttcctctggcttccata
gttgtgcatccaatgtgccagtctgctggggagaaccattctctccaagaaggtcatgtt
ctgcagatcattttggattccatgtctatgactgctttttttgttttaccccaagataaa
tcccgttttttaaatctgtataaactactgagaacctcccttcatgattttaaaaatgta
gtcattttaaaggctttaatgaacttgaaaagcacacaatgtaaccttctggaaaccaag
aaaacgcatctgcagactgttggtactattaaaccttcaatgaccttacctaccacatac
ccttctcaaagtttacagcataaattaagtgaagaaaaccagataccattccacctgcca
gcatctgaaccattgcaatttatcgctgcactcactgggaaaagcgttgtggaattcttc
cataacagtgtttctgaggatgaaaatgaagaattgcggcacctcatgtggtcatccctt
tcattttatcggacaccagacatggaaatcacatcttgtgttttgctgtcaacaaaggca
gtttattttgtgctggatgacgcaataaaaaagataaatcagataccgctgaattcctgc
aaccaaaacgatgtcggcttagagaacagtttattccatcattgctgctgtatagtgata
aagttcagtgatctgcagtctgtaaacattgggcttttcgatcaatactttagaataaca
ggtccttctccaaaccatgttataacattattgaccagagacagctatactacccatgca
ttcatacaacagctcatgtctgtgttatccttgctggcacgaacaccatccccagagcct
gtagagaaagacttctactcagagtttgggaataagaggacaggaacaatggaaaactat
gaaatgatccattccagcagagtgaagtttatatatccaaatgaagaagaaattggggat
cttacttacattgtaacagaaagcactgactctccgggaacattgccatctttaaacatc
ttactgtatgtcctggctttccaagtaagcacagcagaaggaagtgaccaagaagctttg
ctgcaacctaaaaccctcattctcacaagctcggatctgtttctattcaatgaagattac
atcagttacccacttcctgattttgccaaagagcccccaaagaaagataagtaccagtta
gtggatgggaggcgtattcgggatttagaccgtgtgttgatgggctatcagacttatcct
cagactcttacatttgtgtttgatgattctagcaaccaagacctgatgcaaagtctatct
atggatcattttgcagaaacattaagcccctgcaacagtcagaaaacctgtggcaataat
caagaagtacagtggtacatctttattccaagtgctgactgccgggaaaagttgatatcg
ctccttgcccggcagtgggagattctgtgtggcagagagctacctttggagttgacagga
taa
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