Rana temporaria (common frog): 120945426
Help
Entry
120945426 CDS
T07929
Symbol
CACNA1I
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04010
MAPK signaling pathway
rtem04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120945426 (CACNA1I)
04020 Calcium signaling pathway
120945426 (CACNA1I)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120945426 (CACNA1I)
Ion channels [BR:
rtem04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120945426 (CACNA1I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120945426
NCBI-ProteinID:
XP_040215517
LinkDB
All DBs
Position
7:complement(73054182..75133049)
Genome browser
AA seq
2081 aa
AA seq
DB search
MMVILLNCVTLGMFQPCEDVDCSSDRCQILQVFDDFIFIFFAMEMVVKMVALGIFGKKCY
LGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFLEENFTIQGDIILPPYYQPEEDDEM
PFICSLSGDNGIMGCHEIPSLRDRGHKCCLDKEDYYYYNSIHQEFNVSGMCVNWNQYYNV
CRTSNTNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQREHQLMQEQRALYLSSSTVASYAEPGDCYEEIFQYVCHI
LRKAKRRTVGLYTSIQSRRQSRIELSNAKLGINGNEQNQLWVCQKHSQLEYTPRAIVQPI
AITLTSDLLNCPQCTKAKWNDGPKLSTPDSNRSSVEGTQGQNSETGSCGSTSELDKEAEE
DSEEGFCQRLCVEIRVKLRGIVDSKYFSRGIMIAILVNTISMGIEHHEQPEELTNILEIS
NIVFTSMFALEMMLKLSAFGFFDYLRNPYNVFDGIIVIISVWEIIGQNDGGLSVLRTFRL
LRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDSG
DTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFN
LLVAILVEGFQAEGDANRSYSDEERSSSNIEECDKYHEMQIGPDQKLCTVPMTPNGHLES
TPITSQQITGGVMNTSRNSLQRDQVLVAVNCRKSSIMSLGRITYDQRPQAGPRPPHWNRG
GAWGSRRSSWNSLGCRPSIKPRPCTAEHESLLSRAEIHRDRSHSRRASSLKHRRAMSLDN
KGSADIQHHSGVRTSHRAPSKGTNSVGEYQDFSGKPPQIMKDVFPKVNNRKDREEEEEEI
DYSLCFRIRKMIEVYRPDWCELREDWSIFLFSPQNRFRITCQTIIAHKLFDYIVLAFIFL
NCITIALERPQIEHKSTERLFLSISNYIFTAIFVAEMTLKVVSLGLYFGDRAYLRSSWNI
LDGFLVLVSLIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISS
LKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCLGVDVRNVTNKSDCEAANFKWVHHKYN
FDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPITNHNPWMLLYFISFLLIVSFFV
LNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCPVRLLIHS
VCTSHYLDIFITIIICLNVVTMSLEHYSQPKSLEVTLKYCNYMFTTVFVLEAVLKLVAFG
FRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRITRVLKLLKMA
TGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCDNDHPCEGMSRHATFE
NFGMAFLTLFQVSTGDNWNGIMKDTLRDCTSDDRSCLSNLQFISPLYFVSFVLTAQFVLI
NVVVAVLMKHLDDSNKEAQEDAELDAEIEMELAHGLCSQASPVFAMDNGGRGGRPTTEGH
RSLRCFSPAQENLWLDSVSLIIKDTFEGELMIIDNLSGSVFHHYSSPAVCEKCSHDKQEV
QLAEMEAFSLTSDKSSSVLTDDLSSEDQGITSQLKEIKDGQDSPDSLGIGMFGENHFPLA
SIPGSPAAEQYLCEIDKISLPPAESWDSWLKEESNPVSPPPPSSARRSIDSFVYQSLPSS
FHPAISTADKDQGDLALQKSLPKLYSPEPWTTLHSPDYNCAVVRQPTESNSSMESGSATS
EDSLQTTLEDSLNLSDSPQCTLDLPDLRVAPTTPHTTLPISSLSIMQRRNTRPSFALQKV
QRHQRSNSSGGSTSPWMYPSMTPWTLSDEEGGGGSLRGTSEPSETLSSLSLTSLFSPPSS
LAPPGGAMKKCSSXNSLSVAPSRVRGAKQFYAIDPQGFLSMPSWVNGFLTKLLFPSENQE
NHSSTGKLPTVERVIPAGSVSGNVVFGNNNRLNRLRFCSLL
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgatggtaatcctcctgaactgtgtgactctgggaatgtttcaaccatgtgaagatgtt
gactgctcatcagaccgatgccaaattcttcaagtatttgatgacttcatatttattttc
ttcgcaatggagatggtggtgaaaatggtggccttggggatttttgggaagaaatgctac
cttggagatacatggaacagattggatttcttcattgtaatggctgggatggtggaatac
tctctggatctgcagaatataaacctgtctgcaatccgaaccgtgcgtgtcctcagaccc
ctgaaggccatcaacagagtacctagtatgagaatcttggtgaatttactgctggacaca
ctgcctatgctaggaaacgtactccttctgtgtttctttgtcttttttatatttggaata
attggggtacagctttgggctggacttctacgtaaccgttgtttcttagaggaaaacttt
actatacaaggtgacataatattgccaccttattaccagcctgaagaagatgacgagatg
ccatttatctgttctttatctggtgataatggaatcatgggatgccatgagatcccatct
ctaagggatcggggtcacaaatgctgtctggataaggaagactattattattacaactcc
atccatcaggagttcaatgtcagtggcatgtgtgtcaactggaatcagtactataatgtc
tgtcgtaccagcaacacgaaccctcataagggtgccatcaattttgataacatcggatat
gcttggatagtaattttccaggtaatcaccttggagggctgggtggaaatcatgtattat
gtcatggatgctcactccttctataattttatttacttcatcctcctcatcatagttgga
tcgttcttcatgatcaatttgtgcctggttgttattgccactcaattctccgagaccaag
caaagggaacaccaactgatgcaggagcaaagggctttgtatttatcgtctagtacagta
gctagttatgctgagcctggagactgttatgaggaaatttttcaatatgtctgccacatc
cttcgaaaggccaagcggcgcacagttggtctttacaccagcattcagagtcggcggcag
agtcgtattgagctcagcaatgctaagctggggatcaatggcaatgaacaaaatcagctt
tgggtatgtcagaagcacagccagttggaatatactcctcgcgcaattgtacagcctata
gcaataacgcttacctctgatcttttaaactgtcctcaatgtaccaaagctaaatggaat
gatggaccgaaattatctactccagacagcaacagatccagtgtagaagggacacaaggg
caaaacagtgaaacagggagttgtggaagcacatcagaacttgacaaagaggcagaggaa
gatagcgaagaaggcttttgtcaacggctttgtgtagaaattcgtgtaaaactcaggggc
atagtggatagcaaatacttcagccggggaatcatgatagctattcttgtgaatacaatc
agcatgggcattgagcaccacgaacagcctgaagaactcactaacattctggagataagt
aacattgtgttcaccagcatgtttgctctggaaatgatgctcaaactttcagcatttgga
tttttcgactatctcagaaatccatataacgtctttgatggaattatagtcattataagt
gtctgggagattattggtcagaacgatggtgggctttcagttttaagaacttttcgtctt
cttcgggtgttgaaactcgtacggtttatgcctgcattgagacggcagctggtagtctta
atgaagacaatggacaatgtggctacattttgcatgcttctcatgctctttatcttcatc
tttagtattcttggaatgcatatttttggatgtaaattcagcctaagaacagattctgga
gacactgtacctgatcggaaaaactttgattctttactgtgggcaattgtaacagtcttc
cagatcctgacccaggaagactggaatgtggtgctttataatggtatggccagtacctct
ccatgggcagcgctctactttgtggctctcatgacatttgggaattatgtgctctttaat
cttctggttgccattttagtagaaggattccaagcagagggggatgctaacaggtcttat
tccgatgaagaaagaagctcttcaaatatagaagagtgtgacaaatatcatgaaatgcag
atcgggcctgatcaaaagctttgtacagttccaatgacaccaaatggacatctggaaagc
acccccataacaagccaacagatcactggtggagtcatgaatacatctagaaattcccta
caaagagatcaagtacttgtagctgtaaactgcaggaaaagcagcattatgtcgcttggc
cgcataacctatgatcagagaccacaagcagggccacggccacctcactggaacagaggt
ggagcctggggcagtcgtagatcaagctggaacagcttaggctgtcgtccaagtattaag
ccacgaccatgtacagctgagcatgagtctttactctctcgagcagaaatccacagagac
agaagtcattccaggagagcatcaagtctgaaacacaggagagcaatgtccctggacaat
aagggctctgcagatattcaacatcattctggtgtccgtacaagccatagggcacccagc
aaagggactaactcagttggagaatatcaggatttcagtggaaaacctccacagatcatg
aaagatgtttttcccaaggtgaacaaccgtaaagatagggaggaagaagaagaggaaatt
gattatagtttatgtttccgaatcagaaaaatgattgaggtttatcgaccagattggtgt
gaattgcgtgaggactggtccatattccttttctctcctcagaacaggtttcgtattaca
tgtcagacaattattgcacacaagctctttgactacatcgtacttgcatttatatttctc
aactgtattaccattgctttggagaggcctcaaattgagcacaagagcacggagagattg
tttctcagtatatcaaactatatttttactgctatatttgtagctgagatgacattaaag
gtggtttctttaggactttattttggggaccgggcatacctccgcagcagctggaacatt
ctagacggtttccttgtccttgtatccttgattgatattgtggtttctgtggcatctgct
ggaggagccaaaattcttggagttctgagggttctacgacttctacgaacattacggcct
ctaagagtaatcagcagagctccaggtctgaagctggtggtggaaaccttaatatcttct
ttaaaaccaatcggaaatattgtactgatttgttgtgccttcttcatcatttttggcatc
cttggagtgcagctttttaaaggtaaatttttctactgccttggtgtagatgttcgaaat
gtcaccaacaagtcagactgtgaggctgccaattttaaatgggttcaccacaagtacaat
tttgataatctagggcaggctttaatgtcactttttgttttggcatcaaaagacggatgg
gttaatattatgtataatggtcttgatgcagttgctgtggaccagcagccaattaccaat
cacaacccctggatgttgctgtattttatctccttcctacttattgtcagtttctttgta
ctcaacatgtttgtgggggtagtagtagaaaatttccataagtgccgccaacatcaggaa
gcagaggaagcccgaagacgagaggaaaagcgactgaggcgcttggaaaaaaaaaggagg
aaagcccagcgtctgccatattatgccacctactgtcctgttcgccttttaattcactct
gtttgcacaagtcattacttggatattttcattacaatcatcatttgccttaatgttgtc
acaatgtccttggagcactacagccaaccaaagtcccttgaagttaccctgaagtactgc
aactacatgtttactacagtctttgtacttgaagctgtgttgaaactggtggcatttgga
tttcgaagatttttcaaggacaggtggaaccagctggatttggccattgtgctcctttct
gtaatgggaattactttggaagaaatagaaatcaatgcagctttgcctatcaatcccacc
attatccgcattatgagagtgttgcgcatcactagagtgctgaagctgctgaaaatggca
acaggcatgagggcattactggacactgtcgtacaagcactgcctcaggtgggaaacctg
ggacttctcttcatgcttctcttctttatttatgcagctctaggagtcgagctgtttggg
aaacttgtttgtgataatgatcatccatgcgagggaatgagccgccatgctacctttgag
aactttgggatggccttcttgactctcttccaggtatctactggagataattggaatgga
ataatgaaggatacactacgtgactgcaccagtgatgaccgcagctgcttgagcaaccta
caattcatttcacctctgtactttgtcagctttgtgctcacagctcagtttgtactaata
aatgtggtagttgctgtattaatgaagcatctggatgacagtaataaagaagcacaagag
gatgcagagttggatgctgagattgagatggagttggctcatggactctgttctcaggca
tcacctgtttttgctatggacaatgggggacgtggaggaagaccaaccacagaagggcac
cgtagcttaagatgtttttctccagctcaggagaacttgtggcttgacagcgtttcattg
ataattaaggatacatttgaaggggaactgatgattattgacaatttatctggatctgta
ttccatcactattcttcaccagcagtgtgtgaaaaatgtagccacgacaagcaggaggtc
cagctggcagaaatggaggccttttctttaacctctgacaagtcctcttcagtactgact
gatgatctcagttcagaagatcaaggcatcacaagtcagttaaaggaaattaaggatggc
caagacagtccagactctttggggattggaatgtttggtgaaaaccattttccacttgca
agcattcccggttctcctgcagctgaacaatacttatgtgagatagacaagatctcatta
cccccagcagagtcttgggacagctggctgaaagaagaaagcaacccagtatctcctcca
cctccctcctctgccaggagatccattgattcctttgtttaccaatctctgccaagttcc
ttccatcctgccatctctactgctgacaaagatcaaggggatctggcactccaaaaaagt
ctccctaaactttattctcctgagccttggactactcttcattccccagattacaattgc
gcggtcgtgcgacagccaacagaaagcaattcatcaatggaaagtggaagtgcaacttct
gaggacagcttacagactacactggaggacagcttaaatctaagtgactctccccagtgc
accttggacctccctgatctgcgtgtagctcctacaaccccccatactacccttcctata
tcttctctttcaattatgcagaggaggaatactcgccctagctttgcacttcagaaggtt
caacggcaccaacggagcaatagtagtggtggtagcactagtccctggatgtacccttca
atgactccatggaccctttctgatgaagaaggtggtggtggcagtctaagaggaacaagt
gagccttcagagactcttagtagcttatcattaacatctctattttcacccccctcttct
ttagcaccacctggtggtgccatgaaaaaatgcagcagtngtaacagtctttctgttgcc
ccctctagggtaagaggagcaaagcaattttacgcaatagatccacagggcttcctttca
atgccatcatgggtgaatggatttcttaccaaacttctgttcccctcagaaaaccaagag
aaccatagtagtactggaaaactgccaactgtggaaagagtgatacctgccggtagtgtc
tcaggaaatgtggtctttggcaataataatcggctgaacagactgagattttgttctctt
ttatag
DBGET
integrated database retrieval system
