Rana temporaria (common frog): 120945628
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Entry
120945628 CDS
T07929
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtem03016
]
120945628 (TRMT13)
Enzymes [BR:
rtem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
120945628 (TRMT13)
Transfer RNA biogenesis [BR:
rtem03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120945628 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
120945628
NCBI-ProteinID:
XP_040215881
LinkDB
All DBs
Position
7:complement(126884495..126911404)
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AA seq
463 aa
AA seq
DB search
MEVTEQQAERVPEKGAGSTGGPMPGRCSYFVQRKRRYCKMIVSEGKKLCGEHADNGEESN
NRRRIPCPLDPKHTVYEDQLKKHIKKCNSREKPQPVFYVKNINSGSLDLDTCEEQVSLSS
LSKEDLQNLTEILRRVTSGLDPPLPDRKLCHSALQEALNDPTNGDTASKHLKQQASILGH
LDRLGLLGTSHCFVEFGAGRGKLSHWVNLAIENAENVHFLLVERASTRFKVDGKQKKSTF
ERLHIDIQHLSLDEVPSLAQKQLPVIGIGKHLCGAGTDLGLRCLVQNYSNLVKEPQYKRL
KMDTGELKDNAEDKAINTCPVKGIVIALCCHHRCDWHHYVGRDFFQKLGLGQKEFGVFQR
MSSWATCGSRTAGKVLIENEKREPEETEEHDLDLKNTDCSLEGVQGLALTVEERENLGRL
CKLLIDHGRLDYLSNMGYTASLEYYTEPEVSLENVLLIAVPRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcactgagcagcaagcagaacgtgtccccgagaagggggctgggagtactggc
gggcccatgccggggagatgcagttactttgtacagaggaagaggagatattgtaagatg
atcgtgtcagaagggaagaagctctgtggtgagcatgcagacaatggggaggaatcaaac
aacagaagaaggattccttgtcctctggaccccaaacacacagtgtatgaggatcagctg
aaaaaacacattaagaaatgtaattcccgggagaagccccaaccggtcttttatgtgaaa
aatattaattctggttctttggatctagacacctgcgaggaacaggtaagcctcagttcc
ctgtcgaaagaagacctgcagaatcttacagaaatattacgaagggtcaccagtggtctt
gatccgccactgccagacagaaaattatgtcactctgcattacaagaagcattgaatgac
ccaacaaatggagacactgcctccaagcatctcaaacaacaggcttctattttgggtcat
ttggataggttgggtctgttgggcacgtcccactgctttgtggagtttggagcaggtcga
gggaagttatcccattgggtaaaccttgccatagaaaatgctgaaaatgtccacttccta
ttggtagagagagcctccacaaggtttaaggtggatgggaagcagaaaaaatccactttt
gagagactacatattgacatccagcacctttctttagatgaagtccccagccttgctcag
aaacagctgccagtcattggaattggaaaacatctctgtggagctggcacagatttgggt
cttcgctgcctcgtgcaaaattactctaatctagtgaaggaaccacagtataagcgcctc
aagatggatactggagaacttaaagacaatgcagaagacaaagcaataaacacttgtcca
gtcaaagggattgttattgccctttgttgtcaccaccgttgtgactggcaccactatgtg
ggcagagatttcttccagaagctaggactaggacagaaggaatttggagtatttcagcgc
atgtcaagctgggcaacctgtggttccaggacggcagggaaggttttaattgagaatgag
aaaagagaacctgaagagacagaagaacatgacctagacctgaaaaacacagactgcagt
ttagagggagtacaagggctggctttgactgttgaggagagagaaaatttaggacgtctt
tgcaaactgctcatagatcacggacgtctagattacttgagcaatatgggctacactgct
agtcttgaatattatacagagccggaagtgtccttagagaatgtcctgttgatagcagta
cctcgattgtaa
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