Rana temporaria (common frog): 120945830
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Entry
120945830 CDS
T07929
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120945830 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120945830 (SMG7)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120945830 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
120945830 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
120945830
NCBI-ProteinID:
XP_040216257
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Position
7:161352473..161445095
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AA seq
1193 aa
AA seq
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MSLLCAQYLRQAEVLKADMTESKPGTAEAWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQMHCGTVVKPQSSSCAYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KKRWGVSDFIKAFIKFHGHVYLTKNLDKVSPLREQLEEQFKNMLFQKAFNAQQLVHITVI
NLFQLHHLRSFGTEAEQQSFSTEEELCWSQLLTLFMSFLGILCRSPIKTHHCDDTSCADP
LPAIKVSLDWMKLRPSVFQEAAVEERQYVWPWLISLLNSFHVLEEDLSSANMLPLPEEFE
LQGFLALRPAFRNLDFSRGHQAIIGDRETQHRRMRPIRLVSLGKWICENQPRFFDRLMQC
RSIDGEIAFSTDIPELMIEDAVDAEDMSSPHDNKQAETQRSEGSPGLKSVLSTGRSLSCE
SSEKPVVTFKENIKPQEVNRELPARSYTRTVNAGKEQRDYNKGMNAVGNKKENNNKRKND
PKKTVDNKNQEPAKQSIAVQVKTPVSEARKTPVTPTSSPSTNTQFIPIHHPGAFPPLPSR
PGFPPPAYVIPPPVAFTMSSGYTFPPGVNVPGSFLQPSSHSAPGNQGPPGKQSHIPYSQQ
RPSGPGSGNQGTLGNQPQTQAPSNSPTLPSNQTAAQLQIQVMAQQQQQSPTKPIQGLGKN
PHHHNLQYPQATDPSKQLWNNPQVSNSLGKMMPPTMKQNYFMDGRLPTEPMSMLEQCLQH
SAMQQPLEKKVKPFHMDTYNHSSAEMKISDFYWGDQSSYNLNDNRSLLAQQSVNNQRSQR
QPTGYRTGQDAVTRLPFEEPKRSPLLPPDLLKSLAALEEEEELAFSPPPDLYPALLGPLA
NLPGRSLFKSLLEKPSELISQPPSFLSLTGFSLSQERFPSNSVFNEVYGKPPCSSTKPES
CPPFGQQETSLYSLFEGKPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHISQPF
SNFGPIGTPDSRDRRAADRWKSDKPAMGGFGLDYLSVAPPTENSWRQVNNSSSANAWAAQ
GNTREDSSAALMESLKSIWSTTMMHPGPSALEQLLMQQKEKQQRGQGSLNPPH
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtgtgcgcagtatctccggcaggcagaagtcctgaaagcagatatgaca
gaatccaagcctggtacagcagaggcgtggacttcacgtcaagctctgcaagacttgtat
cagaagatgctggtgacagaccttgagtatgcactggacaagaaggtggaacaggacctt
tggaatcatgccttcaaaaatcagatcacaacactgcaaggacaggccaaaaaccgagct
aacccaaaccgtagcgaggtgcaggccaatctttcactgttcctggaggcagctagtgga
ttttatacacagcttttgcaggagttatgcactgtgtttaatgtagatttgccatgccgt
gtcaagtcctcccagctagggatcatcagcaataagcagatgcactgtgggacggtggtg
aagcctcagtccagttcttgcgcttatatttgccagcactgcctggtacaccttggagac
attgctcgctataggaaccagacaagccaggctgaatcatattatagacatgctgctcaa
cttgtcccctccaatggtcagccgtataatcagctggccattttggcctcctcaaagggg
gatcatctgaccactattttttactactgccgcagcatcgctgttaaatttcctttccca
gcggcttccaccaacctgcagaaggcactttctaaagctttggaaagtcgtgacgaggtg
aagaaacgctggggtgtctctgattttatcaaggccttcatcaaattccatggacatgta
tatttaacaaagaatctggacaaagtgagccctttgagggagcagctggaggagcagttc
aagaatatgctctttcagaaggcttttaatgcacagcagctggtccacatcacagtgata
aatctgtttcagctgcaccacttgcggagtttcggcacagaggccgagcaacagagcttt
agtacagaagaggaactttgctggtctcagcttctgactctcttcatgtcgttcctgggc
atcctttgcagaagcccaataaagacccaccactgtgatgatacttcctgtgccgatcca
cttcctgctatcaaggtgtcgcttgactggatgaaactgcgtcccagtgtattccaggag
gctgctgtggaggaaagacagtatgtgtggccgtggctaatttctctgttaaacagtttc
catgtacttgaggaagacctatccagtgccaacatgttgccacttccagaagaatttgag
ctgcagggattcctggctcttcggccggcattcaggaaccttgatttctctagaggtcat
caagccattattggagatcgggagacccagcatcgtcggatgcgaccaatacgtcttgtg
tcattggggaaatggatctgtgagaatcagccacgtttctttgacaggcttatgcagtgt
cgcagcattgatggtgaaattgctttctccacggatattccagaattaatgattgaagat
gcagttgatgcggaggacatgtcctctccacatgacaacaagcaggcagaaactcaaaga
tctgaagggagccctggcttaaaatctgtactgtccactgggcgtagcctgagctgtgaa
tcctctgaaaagccagtggtgactttcaaagagaacattaaaccacaggaagtaaaccgg
gaattgccagcacgaagctacaccagaacagtgaatgctggcaaggaacaaagagactat
aacaagggcatgaatgctgtaggtaacaagaaggaaaataacaataaaaggaagaatgat
cccaagaagactgttgacaataaaaaccaggaacctgcaaagcagagcattgctgtacag
gtgaaaacgccagtctctgaggcaagaaagacgccagtgacgccaacatctagtcctagc
accaacacccagttcatacctatccaccatcctggagctttcccacccttgcctagccgg
cctggttttcctcctcctgcctatgtcatcccaccacccgtggcattcaccatgagttct
gggtataccttccctcctggggtcaatgttccaggatccttcttgcaaccttcatctcat
tcagctcctggaaaccagggtcctcctggcaaacagtcccacattccttacagtcagcag
cgtccttcgggtccagggtcaggaaaccaaggaacacttggcaatcagccacaaacacag
gctccgtccaattctcctactctgcccagcaatcagactgcagcacagctacagattcaa
gtaatggctcagcagcagcagcagtctcctactaaacctatacaaggactgggcaagaac
ccacatcaccacaatcttcagtacccacaggctacagacccttccaagcagctatggaac
aatcctcaagtctccaactccctgggaaaaatgatgccaccaaccatgaagcagaactac
ttcatggacggccgtttgcccactgagcctatgagcatgctggagcagtgcctgcagcac
tcggccatgcagcagcctctggagaaaaaggtgaagcctttccatatggatacgtataac
cacagctctgccgaaatgaagatttcagacttctactggggggaccaaagttcttacaat
ctaaatgacaaccgaagcctcctggcacagcagtctgttaataaccaaaggagccagcgc
cagcctactggctatcgtacaggccaggatgcagtgactagattgccgtttgaggaaccc
aagcgttcccctctcctgcccccggacctgttaaagagtctggctgctctagaggaggag
gaagagctggctttctcccctccccctgatctgtacccagctctgctcggccctctggcc
aatctccctggacgaagcctctttaagtctcttctggaaaagccatctgagctgatatcc
cagcccccctctttcctctcactcactggattttcactgagccaggagaggttcccgagt
aacagcgtgtttaatgaggtgtacggcaaaccaccatgcagcagcacaaagccggagtcg
tgtccaccctttggacagcaggagacatctctttactccctgtttgagggtaaaccttgg
tctccatctcttccagccagctcggatcactctacaccagccagccagtcacctcactcc
tctaatccaagcagcctgcccagctctcctcccacccataatcacatttcccagcccttt
tccaactttgggcccattggaaccccagacagccgagatcgccgagcagctgaccggtgg
aagagcgacaaaccagcaatgggtggctttggattggactacctgtctgtggctccaccc
acagagaacagttggcgccaagtaaataattccagcagtgctaatgcctgggcagcccag
ggtaatacaagagaggactcatcggctgccctgatggaaagcttgaagtccatctggtca
accacaatgatgcaccctggtccatcagcccttgagcagctcctgatgcagcaaaaggaa
aagcagcagagagggcagggatccttgaaccctccacattga
DBGET
integrated database retrieval system