KEGG   Rana temporaria (common frog): 120945830
Entry
120945830         CDS       T07929                                 
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120945830 (SMG7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtem03019]
    120945830 (SMG7)
Messenger RNA biogenesis [BR:rtem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     120945830 (SMG7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120945830 (SMG7)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2
Other DBs
NCBI-GeneID: 120945830
NCBI-ProteinID: XP_040216257
LinkDB
Position
7:161352473..161445095
AA seq 1193 aa
MSLLCAQYLRQAEVLKADMTESKPGTAEAWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQMHCGTVVKPQSSSCAYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KKRWGVSDFIKAFIKFHGHVYLTKNLDKVSPLREQLEEQFKNMLFQKAFNAQQLVHITVI
NLFQLHHLRSFGTEAEQQSFSTEEELCWSQLLTLFMSFLGILCRSPIKTHHCDDTSCADP
LPAIKVSLDWMKLRPSVFQEAAVEERQYVWPWLISLLNSFHVLEEDLSSANMLPLPEEFE
LQGFLALRPAFRNLDFSRGHQAIIGDRETQHRRMRPIRLVSLGKWICENQPRFFDRLMQC
RSIDGEIAFSTDIPELMIEDAVDAEDMSSPHDNKQAETQRSEGSPGLKSVLSTGRSLSCE
SSEKPVVTFKENIKPQEVNRELPARSYTRTVNAGKEQRDYNKGMNAVGNKKENNNKRKND
PKKTVDNKNQEPAKQSIAVQVKTPVSEARKTPVTPTSSPSTNTQFIPIHHPGAFPPLPSR
PGFPPPAYVIPPPVAFTMSSGYTFPPGVNVPGSFLQPSSHSAPGNQGPPGKQSHIPYSQQ
RPSGPGSGNQGTLGNQPQTQAPSNSPTLPSNQTAAQLQIQVMAQQQQQSPTKPIQGLGKN
PHHHNLQYPQATDPSKQLWNNPQVSNSLGKMMPPTMKQNYFMDGRLPTEPMSMLEQCLQH
SAMQQPLEKKVKPFHMDTYNHSSAEMKISDFYWGDQSSYNLNDNRSLLAQQSVNNQRSQR
QPTGYRTGQDAVTRLPFEEPKRSPLLPPDLLKSLAALEEEEELAFSPPPDLYPALLGPLA
NLPGRSLFKSLLEKPSELISQPPSFLSLTGFSLSQERFPSNSVFNEVYGKPPCSSTKPES
CPPFGQQETSLYSLFEGKPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHISQPF
SNFGPIGTPDSRDRRAADRWKSDKPAMGGFGLDYLSVAPPTENSWRQVNNSSSANAWAAQ
GNTREDSSAALMESLKSIWSTTMMHPGPSALEQLLMQQKEKQQRGQGSLNPPH
NT seq 3582 nt   +upstreamnt  +downstreamnt
atgagcctgctgtgtgcgcagtatctccggcaggcagaagtcctgaaagcagatatgaca
gaatccaagcctggtacagcagaggcgtggacttcacgtcaagctctgcaagacttgtat
cagaagatgctggtgacagaccttgagtatgcactggacaagaaggtggaacaggacctt
tggaatcatgccttcaaaaatcagatcacaacactgcaaggacaggccaaaaaccgagct
aacccaaaccgtagcgaggtgcaggccaatctttcactgttcctggaggcagctagtgga
ttttatacacagcttttgcaggagttatgcactgtgtttaatgtagatttgccatgccgt
gtcaagtcctcccagctagggatcatcagcaataagcagatgcactgtgggacggtggtg
aagcctcagtccagttcttgcgcttatatttgccagcactgcctggtacaccttggagac
attgctcgctataggaaccagacaagccaggctgaatcatattatagacatgctgctcaa
cttgtcccctccaatggtcagccgtataatcagctggccattttggcctcctcaaagggg
gatcatctgaccactattttttactactgccgcagcatcgctgttaaatttcctttccca
gcggcttccaccaacctgcagaaggcactttctaaagctttggaaagtcgtgacgaggtg
aagaaacgctggggtgtctctgattttatcaaggccttcatcaaattccatggacatgta
tatttaacaaagaatctggacaaagtgagccctttgagggagcagctggaggagcagttc
aagaatatgctctttcagaaggcttttaatgcacagcagctggtccacatcacagtgata
aatctgtttcagctgcaccacttgcggagtttcggcacagaggccgagcaacagagcttt
agtacagaagaggaactttgctggtctcagcttctgactctcttcatgtcgttcctgggc
atcctttgcagaagcccaataaagacccaccactgtgatgatacttcctgtgccgatcca
cttcctgctatcaaggtgtcgcttgactggatgaaactgcgtcccagtgtattccaggag
gctgctgtggaggaaagacagtatgtgtggccgtggctaatttctctgttaaacagtttc
catgtacttgaggaagacctatccagtgccaacatgttgccacttccagaagaatttgag
ctgcagggattcctggctcttcggccggcattcaggaaccttgatttctctagaggtcat
caagccattattggagatcgggagacccagcatcgtcggatgcgaccaatacgtcttgtg
tcattggggaaatggatctgtgagaatcagccacgtttctttgacaggcttatgcagtgt
cgcagcattgatggtgaaattgctttctccacggatattccagaattaatgattgaagat
gcagttgatgcggaggacatgtcctctccacatgacaacaagcaggcagaaactcaaaga
tctgaagggagccctggcttaaaatctgtactgtccactgggcgtagcctgagctgtgaa
tcctctgaaaagccagtggtgactttcaaagagaacattaaaccacaggaagtaaaccgg
gaattgccagcacgaagctacaccagaacagtgaatgctggcaaggaacaaagagactat
aacaagggcatgaatgctgtaggtaacaagaaggaaaataacaataaaaggaagaatgat
cccaagaagactgttgacaataaaaaccaggaacctgcaaagcagagcattgctgtacag
gtgaaaacgccagtctctgaggcaagaaagacgccagtgacgccaacatctagtcctagc
accaacacccagttcatacctatccaccatcctggagctttcccacccttgcctagccgg
cctggttttcctcctcctgcctatgtcatcccaccacccgtggcattcaccatgagttct
gggtataccttccctcctggggtcaatgttccaggatccttcttgcaaccttcatctcat
tcagctcctggaaaccagggtcctcctggcaaacagtcccacattccttacagtcagcag
cgtccttcgggtccagggtcaggaaaccaaggaacacttggcaatcagccacaaacacag
gctccgtccaattctcctactctgcccagcaatcagactgcagcacagctacagattcaa
gtaatggctcagcagcagcagcagtctcctactaaacctatacaaggactgggcaagaac
ccacatcaccacaatcttcagtacccacaggctacagacccttccaagcagctatggaac
aatcctcaagtctccaactccctgggaaaaatgatgccaccaaccatgaagcagaactac
ttcatggacggccgtttgcccactgagcctatgagcatgctggagcagtgcctgcagcac
tcggccatgcagcagcctctggagaaaaaggtgaagcctttccatatggatacgtataac
cacagctctgccgaaatgaagatttcagacttctactggggggaccaaagttcttacaat
ctaaatgacaaccgaagcctcctggcacagcagtctgttaataaccaaaggagccagcgc
cagcctactggctatcgtacaggccaggatgcagtgactagattgccgtttgaggaaccc
aagcgttcccctctcctgcccccggacctgttaaagagtctggctgctctagaggaggag
gaagagctggctttctcccctccccctgatctgtacccagctctgctcggccctctggcc
aatctccctggacgaagcctctttaagtctcttctggaaaagccatctgagctgatatcc
cagcccccctctttcctctcactcactggattttcactgagccaggagaggttcccgagt
aacagcgtgtttaatgaggtgtacggcaaaccaccatgcagcagcacaaagccggagtcg
tgtccaccctttggacagcaggagacatctctttactccctgtttgagggtaaaccttgg
tctccatctcttccagccagctcggatcactctacaccagccagccagtcacctcactcc
tctaatccaagcagcctgcccagctctcctcccacccataatcacatttcccagcccttt
tccaactttgggcccattggaaccccagacagccgagatcgccgagcagctgaccggtgg
aagagcgacaaaccagcaatgggtggctttggattggactacctgtctgtggctccaccc
acagagaacagttggcgccaagtaaataattccagcagtgctaatgcctgggcagcccag
ggtaatacaagagaggactcatcggctgccctgatggaaagcttgaagtccatctggtca
accacaatgatgcaccctggtccatcagcccttgagcagctcctgatgcagcaaaaggaa
aagcagcagagagggcagggatccttgaaccctccacattga

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