Rana temporaria (common frog): 120945998
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Entry
120945998 CDS
T07929
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120945998 (FUBP1)
03041 Spliceosome [BR:
rtem03041
]
120945998 (FUBP1)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120945998 (FUBP1)
Spliceosome [BR:
rtem03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120945998 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
120945998
NCBI-ProteinID:
XP_040216588
LinkDB
All DBs
Position
7:187429607..187451838
Genome browser
AA seq
664 aa
AA seq
DB search
MSDYSTVPPPNGGNAGGVQDAFLDALQRARQIAAKIGGDAPPQQQQQQPMNSNDYNFTGQ
KRPLDDGDQPEAKKVAPTNDSFQPSGPPMHQQQRSVLTEEYKVPDGMVGFIIGRGGEQIS
RIQQDSGCKIQIAPDSGGMPDRSCMLTGTPDSVQSAKRMLDQIVEKGRPSPGYHGDGPGG
NAVQEIMIPAGKAGLVIGKGGETIKQLQERTGVKMVMIQDGPQNTGADKPLRITGDPYKV
QQAKDMVLELIRDQGGFREARNDYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQSD
AGVRIQFKPDDGSTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNNGGPGPGGRGRGRG
QGNWNMGPPGGLQEFNFAVPTVKTGLIIGKGGETIKNISQQSGAKIELQRNPPPNSDPNM
KLFTVRGSPQQIDYARQLIEEKIGGPVNPLGPPVPHGPPGGVPGPHGPPGPQGPGAPMGP
YNPQQYNPGPQGPQQQHGPPAQYAPQGWGNTYPHWQQPAQPDPSKAGTDPNSAAWAAYYA
HYYQQQAPQPPAAPSAGPAPTQTNGQVDAPQAVPQGGQVDYTKAWEEYYKKMGQQAPPQD
YSKAWEEYYKKQGQTVPVAGAAPPAGQPDYSAAWAEYYRQQAAYYAQTTSPQTMPQHPPA
PQGQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactactccaccgtccctccacccaacggcgggaacgccggaggggtccaagac
gccttcttagacgcgctgcagagggcgagacagattgctgcaaaaataggaggagatgca
ccaccacaacaacaacaacaacaacctatgaattcaaatgactacaactttacagggcag
aagagaccattagatgatggagatcagccagaggcaaagaaagtagctccaacaaatgac
tcgtttcaaccttcagggcctcctatgcatcaacaacagaggtccgttcttactgaagag
tacaaagttccagatggaatggttggattcataattggtagaggtggtgaacagatatca
cgcattcagcaggattctggctgcaagattcagattgctccagatagtggtggaatgcct
gaccgatcctgcatgttaactggaacccccgattctgtccagtctgcaaagagaatgctt
gatcaaattgttgaaaagggaagaccctctcctggataccatggagatggccctggtggg
aacgcagttcaggaaatcatgattccagctggtaaagctggtctagtcattggaaaagga
ggggaaactattaaacaacttcaggaacgtacaggagttaagatggtcatgattcaggat
ggaccccaaaacacaggagcagacaagccattaagaatcacaggagatccttacaaagtg
cagcaagctaaggatatggtattagaattaatacgtgatcaaggaggtttcagagaggca
agaaatgattatggctcaagaataggcgggaatgaaggaattgatgtacccatacctcgg
tttgctgttggaattgtaataggcaggaatggtgaaatgatcaagaaaattcagagcgat
gcaggtgtcagaatccagtttaaaccagatgatggctcaactccagaaagaatagcacag
atcacaggtcctccagacagatgtcagcatgctgcagagatcataacggacttgctgcgc
agtgtccaggctggaaataacggtggtcctggtccaggtggcagaggaaggggtagagga
caaggaaactggaatatgggcccgccaggtggtctgcaggaatttaactttgcggttccc
acagtaaaaaccgggctcatcattggaaaaggcggtgaaactatcaagaacataagccaa
caatcgggagccaaaatagagcttcagagaaatcctccaccaaattcagatccaaacatg
aagttgtttactgtccgtggctctccacaacagatagactatgcaaggcaactaattgaa
gaaaaaattgggggcccagttaatcctttagggcctccagttcctcacggacctcctgga
ggtgtgccaggccctcatggacctcctggaccccaaggccccggtgctcccatgggacca
tacaaccctcaacaatataacccagggccccaaggtccacaacagcaacatggtccaccc
gcgcaatacgcccctcagggctggggcaacacatacccacattggcagcagccagctcag
ccagacccaagtaaagcaggaacagaccccaattctgcagcatgggcagcttattatgct
cactattaccagcagcaagcacctcagccacctgcagctccatctgctggaccagctcca
acccaaactaatggacaagtggatgcacctcaagctgtccctcaaggtggccaagtggat
tacacaaaagcttgggaagagtattacaaaaaaatgggccagcaagccccacctcaagac
tactccaaagcatgggaagaatattacaaaaagcaaggccaaacggttccagttgcaggt
gcagcaccacctgctggccagcccgattatagcgctgcctgggctgaatactacagacaa
caggctgcatattacgcacagaccacaagtccccagacaatgccacagcaccctcctgcg
cctcagggccagtaa
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