Rana temporaria (common frog): 120946078
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Entry
120946078 CDS
T07929
Symbol
USP1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120946078 (USP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120946078 (USP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120946078 (USP1)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120946078 (USP1)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120946078 (USP1)
Peptidases and inhibitors [BR:
rtem01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120946078 (USP1)
Ubiquitin system [BR:
rtem04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120946078 (USP1)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
120946078 (USP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120946078
NCBI-ProteinID:
XP_040216732
LinkDB
All DBs
Position
7:complement(199444288..199470464)
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AA seq
761 aa
AA seq
DB search
MPGVTQCESQTVLAKASPTRKNRLSLRFFQKKETKRTLDFAETPQTESQSVEEKEPEVSD
QVVPAAQLSPPACCVKKDSLVPFVGFNNLGNTCYLNSILQVLCYCPGFRSGIKHLCDVIS
KKRVTSKDDTEQVLEKDGVKEDLPASYEVICSLSSLVHSAEHLQLSFLLNPENYETELAA
QPRRLLNTLRELNPMYEGYLQHDAQEVLQCILGNIQEACQALKKEMKSLQMQDPAKPQPE
KGPIPCETLEKPQNDSSCPETEAETNINGKRKNEHEVGNAKKRTKLSKEPSLEEQRVTRS
KRKSDKQDGKVDSSKSANLPTQKKSRLGLHWLKSGKQPSILSKFCNLNRNSNTSPKSPPA
EHRAQSIKPELERIENEKPVKDIGDCKQEESKDAEPSQNESTELELVEKLFQGQLVLRTR
CLECECFTERREDFQDISVPVQENDPPKVEENSDISPDSRTEIKTLKWAISQFASVERIV
GEDKYFCENCHHYTEAERSLLFDKIPEIVTIHLKCFAANSSEFDCYGGLSKVNTPLLTPL
QLSLEEWSTKPSPDLYGLFAVVMHSGVTISSGHYTAYVKLDDIHNFELNQIKFPGDHHDM
GKTEPLTQDVQTSDETHDGETSCRANTNLPSTSKVNKKGNDAIGLLGGQKSKSDFEQLPT
PKTPKTERVSSAVSDGKGLSDANGDLHSDNDQKVQSFSDGLCSSKSAAHFLHILKEYEGK
WLLFDDSEVKVTEERDFLTTISPTTQSTSTPYLLFYRRLAK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagttacccaatgtgaaagtcaaacggtcctggccaaagccagtcccaccaga
aagaatcgcctatctctacgcttcttccagaagaaagaaacgaaaaggaccttggacttt
gccgaaacaccgcaaaccgaaagccagagtgtggaggagaaggagcccgaagtctctgat
caagtagttcctgctgcacagttatcccctcctgcctgctgtgtgaagaaagatagcctg
gttccattcgtaggcttcaacaaccttggcaacacatgttacctcaacagcattcttcag
gttttatgttactgccccgggttcagaagtggaattaagcacttgtgtgatgttatttcg
aagaagagggtgacttcaaaggatgacactgaacaggtgcttgaaaaggacggtgtgaag
gaagacttgccagccagctatgaggtgatctgcagtctaagctccctggttcactctgct
gaacaccttcagcttagttttcttttgaatccagaaaattatgagactgaacttgctgct
caaccgagaagactcctaaacacattaagggaacttaatcccatgtatgagggatatctt
caacatgatgcacaggaggtcttgcagtgcatattggggaacatacaggaagcatgtcag
gctctcaaaaaggagatgaaaagcttacaaatgcaagacccagccaaaccccaacctgaa
aaaggacccatcccttgtgaaaccctagagaagcctcaaaatgattcttcttgcccagaa
acggaggctgaaaccaatataaatgggaagcgaaagaacgaacatgaagttggtaatgca
aagaaaaggacaaagctttccaaagagccttctctggaggagcagagggtgaccagatct
aagaggaagtccgataaacaagatggcaaagtggatagttctaaatctgctaatcttcct
actcaaaagaaatccagattaggcctgcactggctcaagtctggcaagcagcctagtatt
ctatccaagttctgtaacctaaatagaaactccaacacatcacctaaaagtcctccagct
gagcaccgtgcccaaagtataaaaccagagcttgagaggatagagaatgagaaaccagtg
aaggatattggtgactgcaaacaagaggaaagcaaagatgcagagccttcccagaatgag
tcaaccgagttggaactggtggagaaattgttccagggccaactggtgctgcggactcgc
tgccttgagtgcgagtgtttcacagagaggagggaagatttccaggatatcagtgtacct
gtgcaagaaaacgatccccccaaagtggaagagaactcggatatctctcctgattccaga
acggaaatcaagaccttgaaatgggccatatcccagtttgcatcagtggagagaattgtc
ggagaggataaatatttctgtgaaaactgccatcattacacagaagcggagagaagcctt
ttgtttgacaagatcccggaaatagtaaccatccatctgaaatgcttcgctgcaaacagc
tcagagtttgactgctatggaggcctttctaaagtaaacacgcctttgttaacaccatta
caattatcgctggaggagtggagtaccaaaccttccccggacctctatggcctgtttgca
gtggtaatgcacagtggagtgacaataagcagtggccactataccgcatatgtaaaactt
gatgacatccataactttgaactcaaccagatcaaattccccggggaccaccatgacatg
ggtaaaactgaacctctaacgcaggatgtccaaacatccgatgaaacccacgacggcgaa
acttcatgtcgagccaatacgaatttgccatcaactagtaaagtaaataaaaaggggaac
gatgccattggacttcttggcggacaaaaaagtaaatctgactttgagcagctgccaaca
cctaaaactccgaaaaccgagagagtgtccagcgctgtatcggacgggaaaggactgtct
gacgccaacggtgatctccattcggataacgatcagaaagttcagtctttttcagatgga
ctctgctcaagtaaatccgctgcccatttcttacacattctaaaggagtatgaaggcaaa
tggctgctttttgatgactctgaagtgaaggtcacagaagaacgggactttctcaccaca
atttcccccaccactcagtctacatctactccctatctactcttctacagaagactagcc
aagtag
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