KEGG   Rana temporaria (common frog): 120946124
Entry
120946124         CDS       T07929                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
rtem  Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtem03036]
    120946124 (KDM4A)
Enzymes [BR:rtem01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     120946124 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     120946124 (KDM4A)
Chromosome and associated proteins [BR:rtem03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120946124 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF4537 Tudor_5 PHDvar_NSD 53-BP1_Tudor SR-25 PTM_DIR17_Tudor
Other DBs
NCBI-GeneID: 120946124
NCBI-ProteinID: XP_040216848
LinkDB
Position
7:208105686..208134621
AA seq 999 aa
MAGENENPNPGSRIMTFYPTMEEFRNFKRYIAYIESQGAHRAGLAKVVPPKEWKPRVCYD
DLDDLVIPAPIQQVVTGQSGLFTQYNIQKKPMTVKEFRRIANSDKFCTPRYADFEDLERK
YWKNLTFNAPIYGADVNGTLYDKQHVDDWNIGKLNTILDVVERESGITIEGVNTPYLYFG
MWKTSFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSAQSCEAFLR
HKMTVISPFILKKYGIPFDKVTQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATLRWIEY
GKQAVLCSCRKDMVKISMDVFVRKFQPERYKQWKVGKDFTAIDHTQPTPEAAEFVDEHNE
SEQKKSVTKHRIGTKRHRVCLEVPEELNQNEEDFKEVPCEMETTCVNEVKEEECSPEDTE
PGSSGQQYETLKNVENYGMPENYTPYSNPASPSSSADSSSSSQDSSADSAASSDTDSDSQ
QRSMSRKKSGAHSYSKGKSAEQKKTSSMGSFTEHELKEVAEKHRNMQEHQNAKSRRQPLC
KLPRYHPLVMKESGSEDDQPEQTLKDDEFEEMEPWAKPLSQLWQNKPQAFQLESEYNLAL
SRVPPHCSVCLLFRTYYQSNCEAPSTTDTTPVAFQLKTKPLIPEMCFTTTSCNTDLNLSA
PYLEEDGTSLLISCRKCNVCVHASCYGVSKDKAVEGWMCSRCEEDAMTQDCCLCTLRGGA
LQKANDNRWVHVMCAVAIAEAKFVNIAERRPVDISKIPLMRFRLKCAFCKKRRKRVAGCC
VQCSHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCSRHKPSQNEGKDADRDIVLGQTV
IAKHKNGRYYQSEVVKLTKETFYEVNFDDGSFSDNLFPEDIVSRDCLNLGPPAAGDIVQV
RWTDGLVYGAKFVASHTIQMYQVEFEDGAQLPAKRDDVYTLDEELPKKVKSRLSVASDMR
FTEIFTEQEVKQEVKRQRVINSRYREDYIEPALYRAIME
NT seq 3000 nt   +upstreamnt  +downstreamnt
atggcgggggagaatgaaaacccgaacccgggctcccggatcatgaccttctacccgacc
atggaggaattccgcaacttcaagcggtatatagcgtatatcgagtctcagggagcgcac
cgcgcagggttggccaaggtggtccctcccaaggaatggaagcctcgggtctgttacgat
gacctggacgatctggtgattccggcgcccattcagcaggtggtgaccggccaatccgga
ctcttcacacaatacaacattcagaagaaaccaatgaccgtcaaagagttcagacgtatc
gctaacagtgacaagttttgcacacctcgctacgctgacttcgaagacctggaacgcaaa
tactggaagaatctgactttcaacgctccaatttacggtgcagacgtgaacgggactctc
tatgataagcagcatgtggatgattggaacatcggcaaactgaacaccatcctggacgtt
gtggagagggagagcggcatcaccatagagggtgtgaacaccccatacttgtactttggc
atgtggaagacgtcctttgcctggcacactgaagacatggacctgtacagcatcaactac
ctgcacttcggggagcccaaatcatggtacgccattccacctgagcatggcaagagactg
gagagattggccaaaggcttcttccctggcagcgctcaaagctgcgaagcatttctccgt
cacaagatgacggtcatctcgcccttcatcctgaagaagtacggcatccccttcgataag
gtcactcaggaagctggcgagttcatggtcacctttccatacggctaccatgctggcttc
aatcacggcttcaactgtgccgagtccaccaacttcgctacattgcgatggatcgagtac
gggaagcaagctgttctgtgttcctgtagaaaagacatggtgaagatctcaatggatgtg
tttgtgcgcaagttccagcccgagcgttacaaacagtggaaagtgggaaaagacttcacg
gctatcgaccacacccagcccaccccggaagcagcagagtttgtggatgaacataatgaa
tctgaacaaaagaaaagtgtgaccaaacaccgcatcggaaccaagcggcaccgggtgtgt
ttggaggtcccagaagagttgaaccaaaatgaggaggacttcaaggaggtgccgtgtgaa
atggagaccacctgtgtgaacgaagtcaaggaggaggagtgcagcccggaggacacagaa
ccagggtcttctggacaacaatatgaaactttgaaaaatgtagaaaattatggcatgcca
gaaaattacactccatactccaacccggccagcccgtcctccagtgcagacagctcctct
tcatcgcaggacagctccgcggacagtgcggcctcgtcggacacggattctgactcccag
cagagatctatgtctaggaagaagagcggtgcacacagctattccaaaggcaaatctgca
gagcagaagaaaaccagctccatgggcagcttcaccgaacatgaactgaaagaggttgct
gagaagcacaggaacatgcaggagcaccagaatgccaaaagcagaagacagcccctctgc
aaactcccccgttaccacccgttggtgatgaaggagagcggcagtgaagatgaccagcct
gaacagactctgaaggatgatgagtttgaagagatggagccctgggccaaacccctgagc
cagctgtggcagaacaaacctcaggccttccagttggagagcgaatacaacctggccttg
tctcgggtccctccgcactgctccgtgtgtctgctcttcaggacatattatcagtcgaat
tgtgaagctccaagcacgactgacacgacccctgtagctttccagctgaaaacaaagcca
cttatccctgaaatgtgcttcacaaccaccagctgcaacaccgacttgaacctgtcggct
ccgtacctggaagaggatggaaccagcctactgatctcctgcagaaagtgcaacgtttgt
gtgcatgcaagttgttatggagtgtccaaagataaagccgtggagggctggatgtgttct
cgctgtgaggaggatgccatgacgcaggactgctgcctgtgtactcttagaggtggagcg
ttacagaaagccaacgataaccggtgggtgcatgtcatgtgtgcagtggccatcgctgaa
gcgaaatttgtgaacattgccgagaggcgtcctgtagacatcagtaaaatccccttgatg
aggttccggctgaaatgtgctttctgcaagaagaggcgaaagagggtggcagggtgctgc
gtccagtgctcacacggcaggtgccccacgtcctttcacgtctcctgcgcccaggccgct
ggagtgatgatgcagccggatgattggccctttgtggtgtttataacctgttccagacac
aaaccctcccagaatgagggaaaagatgcagacagagacatcgtattgggacagacggta
atcgccaagcacaagaatggccgctactatcagagcgaggtggtcaagctgacaaaggaa
accttctacgaggtcaattttgatgatggctctttcagtgacaatctctttccagaggat
atcgtgagccgtgactgtcttaatttgggtcctccagccgctggggatattgttcaggtg
cgctggacagacggccttgtgtacggtgcaaaatttgttgcatcgcacactattcagatg
taccaggtggagtttgaggatggtgctcagctcccagcaaagagggacgatgtgtacact
cttgacgaagagttgccaaagaaagtaaagtcccgtctgtctgtggcatccgacatgcgc
ttcacggaaatcttcacggagcaggaagtgaagcaagaggtgaaaagacagcgagtcatc
aactccaggtatagagaggactacattgagcccgccctgtaccgcgccatcatggagtga

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