Rana temporaria (common frog): 120946643
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Entry
120946643 CDS
T07929
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120946643 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120946643 (EXOSC1)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120946643 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120946643 (EXOSC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
GULLO2-like_3rd
Motif
Other DBs
NCBI-GeneID:
120946643
NCBI-ProteinID:
XP_040217170
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All DBs
Position
8:5759742..5777542
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AA seq
193 aa
AA seq
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MAPVKWCVPGERLCSLEDCTPGHGTYCKHGYVFASLAGYVVKSCDKDTSVLSVVRDTDSL
LLPEVGVIVTCKVVSIHQRFAKVQIMFIGNRALKNTFRGTIRKEDIRATEKDKVEVYKCF
RPGDIVMGKVISLGDSQSNYLLSTAENQLGVVVAHSEAGATMVPISWCEMQCPKTHIKEP
RKVARVQREFLQT
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtgaagtggtgtgtgcccggggagcggttgtgtagtctggaggattgtact
ccgggacacgggacctactgcaaacacggctacgtcttcgcctcgctcgctggttacgtg
gtgaagtcatgtgacaaggatacgtctgtgttatctgtggtgagggacacggattccctt
cttctaccagaagtgggcgtcattgtgacctgtaaggtggtgagcatacaccaaagattt
gccaaagttcagatcatgtttattggcaacagagctctgaagaacacattcaggggtaca
atcagaaaagaagacatccgagcaacagaaaaagacaaggttgaagtttacaaatgtttt
cggccaggagatatcgtcatgggaaaagttatatctctgggagattctcagtccaattac
cttctcagcacagcagaaaaccagctgggagttgtagtcgcacacagtgaagcaggggcg
accatggtgccgatcagctggtgtgagatgcagtgccccaaaacgcacatcaaggaaccc
cggaaggtggcgcgagtgcagcgcgagtttctgcagacctaa
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integrated database retrieval system