Rana temporaria (common frog): 120946837
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Entry
120946837 CDS
T07929
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120946837 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120946837 (VTI1A)
Membrane trafficking [BR:
rtem04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
120946837 (VTI1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Sec20
Laminin_II
Sec8_N
DUF1664
DegQ
DUF6730
GP41
Motif
Other DBs
NCBI-GeneID:
120946837
NCBI-ProteinID:
XP_040217551
LinkDB
All DBs
Position
8:complement(37427279..37988994)
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AA seq
227 aa
AA seq
DB search
MSAVFQGYEQDYGVLTADITNRIGKIPKLAGGESEEKKQMVMNVEKQLEEAKELLEQMDL
EVREIPAQSRGMYSNRMRSYKQEMSKLEADFKRSRIAYSDEVRNELLGDDGNSSESQLIK
LREERAHLLDNTERLDRSSRRLEAGYQIAVETEQIGQNILENLNQDREKIQRARERLRET
DTNLGKSSRILTGMLRRIIQNRLLVFVLGIIILITIILAIYFSFRGH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgttttccagggatacgagcaggactatggagtcctcaccgccgacatcacc
aaccgcatcggcaagatccccaaactggccgggggtgagtcagaggagaagaagcagatg
gtgatgaatgtggagaagcagctggaagaagccaaagagctgctagaacagatggacctg
gaagttcgggaaatcccagctcagagccgtgggatgtacagcaaccgtatgaggagctac
aaacaggagatgagcaaactggaggctgactttaaaaggtcacggatcgcctacagtgac
gaagtgcggaatgagctactaggggatgatgggaattcctcggagagccagttgataaaa
ttacgggaagagagggcacatcttctggataacacagagaggttggacaggtcgtcgcgg
aggctagaggccggatatcagatagcggtggagactgagcaaattggacagaatattttg
gagaacctgaaccaggaccgggagaagatccagagagcaagagagcgactcagggaaacc
gacacaaatctgggaaaaagctccaggattctgacgggaatgttacgaaggatcatccag
aatcgtctcctggtgttcgtcctgggaatcatcatccttataaccatcattctggcaatt
tatttttctttccgcggacactga
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