Rana temporaria (common frog): 120946845
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Entry
120946845 CDS
T07929
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120946845 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_NLRC4
DUF7795
Motif
Other DBs
NCBI-GeneID:
120946845
NCBI-ProteinID:
XP_040217567
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Position
8:complement(39873066..39967451)
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AA seq
583 aa
AA seq
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MSTSVGKEKDPKDKEHKGPATVKDREKESKASGGTLKDSKDKDLKTKVKDAKEGKKDASG
AQPGVAFSVDNTIKRPNPAAGMRKKASNAEVIKELNKCREENSTRLDLAKKSIHQLPASI
KELTQITELYLYGNKLPSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHN
KLREIPPVVYRLSSLTTLFLRFNRLTTVEKDIQTLTKLTMLSIRENKIKQLPAEIGQLCN
LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTLGNLSSLNRLGLRYNRLSAI
PRSLARCSELDELNLENNNISTLPEGLLSSLVKVTSLTLARNCFQSYPVGGPSQFSTIYS
LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE
DVSGLVSIEVLTLSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT
NNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHGLPFELAL
CSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccagtgtgggtaaagagaaggaccccaaggataaggagcataagggtcctgca
acagtaaaagaccgtgaaaaggagtccaaggcctctggtggcactctgaaagacagcaaa
gacaaggaccttaagaccaaagtgaaagatgccaaagaagggaagaaagatgccagcggg
gcacagcccggggtggcattttccgtggacaatacaataaaacgtcccaacccagcagct
ggaatgcgcaaaaaggccagcaatgctgaggtgatcaaggaattgaacaaatgccgggag
gagaactctactcgcttggacttggccaaaaagtccatacaccaactcccggcctccatc
aaggaactcacacagataacagaactttatttatatggtaacaagctgccatcgctgccg
gcggaggtgggctgcctggtgaacttggtaacgctagcacttagcgagaactctttaacc
agcttgccggactctctggacaacttgaagaagctgcgcatgcttgacttgcggcataac
aagctgcgagagatcccaccagtggtgtatcggctcagctcgctcaccacgctatttttg
cgctttaaccgtctcactactgtggagaaggacattcaaaccctgacgaagctaacgatg
ctgagcatccgggaaaacaagatcaaacagttaccagcagagattgggcaattgtgtaac
ctcatcacactggatgtcgctcacaatcagctggaacatcttccgaaagagatcgggaac
tgcactcagataaccaacttggatctgcagcacaacgagctcttggacctgccagacaca
ctagggaatctgtccagcttgaaccgcttggggctgcgctacaacaggctgtcggccatc
ccacgatccttagcgaggtgcagcgaacttgatgaattgaacttggagaataacaatatt
tccactttaccagagggtctgctgtccagcctggtgaaagtgacaagtttaacccttgcc
aggaactgtttccagtcctatccggtgggcgggccctcacagttttccactatctactcc
cttaatatggagcataatcgtattaacaaaattccatttggaattttctccagagctaaa
gtattaagtaagctgaatatgaaggacaatcagctaacttctctacccttggatttcggc
acatggacgagtatggttgagctgaacctggccaccaaccagctaaccaaaatcccagaa
gatgtgtctggtttagtctctattgaggtattgactctatcaaacaatctcttaaagaag
ctgccacatggtattgggaatctgcgcaagctgagggagttggatctcgaagagaacaag
cttgagtctttgccaaacgagattgcttacctgaaagacctacagaaactggttctgacg
aataaccagctgacgaccttgccaagagggatcggtcacctgacaaacctgacacacctg
ggacttggggagaaccttctcactcatcttccagaggaaataggtacactggagaacttg
gaggagctgtatctcaacgacaaccccaatttacatggcctccccttcgagctggccctg
tgcagcaaactgtcaatcatgagtattgagaactgtcctctcagtcacctgcctccacaa
attgttgctggtggaccctcatttatcatccagttcctgaagatgcaaggtccttaccgt
gccatggtctaa
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