Rana temporaria (common frog): 120946849
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Entry
120946849 CDS
T07929
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04110
Cell cycle
rtem04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120946849 (SMC3)
04114 Oocyte meiosis
120946849 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120946849 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtem00535
]
120946849 (SMC3)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120946849 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
120946849 (SMC3)
Proteoglycans [BR:
rtem00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120946849 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
CreS_N
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
120946849
NCBI-ProteinID:
XP_040217573
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All DBs
Position
8:complement(40510323..40601699)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETSGEKSRQLRDAQQDARDKMEEIERQVREWKSKIAGMKEEKEQLSAERQEQIK
QRTKLELKSKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSVKQKEES
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAINKDL
EDTEANKEKNLEQYTKLDQDLNEVKARVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVMEHFRRKGINPHVANGYHGIVMNNF
DCEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILTEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYINRFDKAFKHVFGRTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKVEDELHALEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRLQSEKTFMPKQRSLQSLEASLHAMESTRDSLKAE
LGTDLLSQLSLEDQRRVDALNDEIRQLQQDNRQLLNERIKLEGTITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELENINKRIKETVARSEGLDVNIDKTEVEVKDLVKS
MDRWKHMEKENLDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGNADGEKG
SSSKKSVPSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMILELASHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaaacaggttatcatccaaggcttccgcagctacagagatcagactattgtt
gatccctttagttcaaaacacaatgttattgtgggaagaaatggatctggcaagagtaat
ttcttctacgccatccaatttgttcttagtgatgaattcagtcatctccgtccagagcag
agattggctcttctacatgaaggaacaggtcctcgagtcatttctgccttcgtggaaatt
atatttgataactccgacaacagattgccaattgacaaggaggaggtgtcactacgaaga
gtgattggagccaaaaaggaccagtatttcctagacaagaaaatggtgacgaagaatgat
gtaatgaatcttttggaaagcgctggcttttcacgtagtaatccatactacattgttaaa
cagggaaagattaatcagatggccacagctccggactctcagcgtctgaaactgctgcgg
gaagtagctggaaccagagtgtacgatgagaggaaagaagagagtatctccttgatgaag
gaaactgagggtaaacgtgaaaagatcaatgagctactgaagtacatcgaagagcgactg
cacaccctagaggatgagaaagaagaactggcccagtaccagaagtgggataagatgagg
agagcactggagtataccatctacaaccaggagctgaatgaaacccgagccaaactggac
gagctttcctcaaagcgtgagaccagcggtgaaaaatcaaggcagttgagagatgctcaa
caagatgccagagataaaatggaggaaattgaacgtcaagtgcgcgagtggaaatcgaag
atcgcagggatgaaggaggagaaggagcaactgagcgcagaaaggcaggagcagataaaa
cagagaaccaaacttgagctgaaatccaaggatctacaggatgagctggctgggaacagc
gagcagaggaaacgtttgctaaaagagaggcagaagttactggagaagattgaggagaag
cagaaggagctggctgaaaccgagcccaaattcagcagtgttaaacagaaagaagaaagt
ggcattgcaagactggctcaagctacacaggaacgaactgacctgtatgccaagcaagga
cgtggtagccagttcacctctaaagaagagagagataagtggattaagaaagagcttaag
tctttagaccaggccattaatgacaaaaaacgtcagattgctgccataaacaaagatctg
gaagatactgaagcaaataaggagaaaaatcttgagcagtacactaaactagatcaagat
ctgaacgaagtgaaagctcgggtggaagaactggataaaaaatattatgaggtgaaaaat
aagaaagatgaattacaaagcgagcgaaattacttgtggcgggaggagaatgcagaacag
caggccctagcggccaagagggaggatctggagaagaaacagcagctacttcgggctgcc
acaggaaaggcaattttaaacggcattgacagcattaataaagttatggagcactttcgg
aggaagggaattaatccacatgttgctaatggctaccatggcatcgtcatgaataatttt
gactgcgaacctgccttttatacttgtgtggaggtcacagcggggaacaggttgttctat
catattgtcgattcagatgaggtcagcaccaagatcttaacggagtttaacaagatgaat
cttcctggagaggttacctttctgccactcaacaagttagatgttagagatactgcctac
ccagagaccaatgatgccattcctatgatcagtaagctacggtacattaaccgattcgat
aaagcttttaagcatgtgtttgggaggacacttatttgtcgcagtatggaggtgtccaca
cagctggccagggcattcacaatggattgtatcacccttgagggtgaccaggtcagccat
cggggtgcactgactggtggttactatgacaccaggaagtctcgtctggagctgcagaaa
gatgtgcggaaagtagaggatgaactgcatgcactggaggcaaagctaaatgagaaccta
cgcagaaacattgaaaggattaataatgaaattgaccagttgatgaaccagatgcaacag
attgagacacagcagaggaagtttaaagcctcacgagacagtatattatcagaaatgaag
atgctgaaggagaagcgtctgcagtctgaaaagactttcatgccaaagcaacgcagcttg
cagagcttggaggccagtttacatgccatggagtcaactcgggattcccttaaagcagag
ctgggaacagacctgttatcacagctaagtctggaagaccaaagaagggtagatgccctg
aacgatgaaatccgacagttacagcaggacaatcgacaactcctgaatgaaagaatcaag
ctggagggcacaatcactagagtagagacgtacctgaatgagaacttgcggaagaggctg
gaccaagtagagcaggaactgaatgagctaagagagacagagggggggacagtacttact
gcaaccacatctgagctggagaacatcaacaaacgtatcaaggaaacagtggcacgatca
gaaggtctggatgtaaatattgataaaactgaagtagaagtaaaagatcttgtgaagagc
atggatcgatggaagcatatggaaaaagaaaatctggatgccattaatcacgacacaaag
gagcttgagaagatgaccaacagacagggaatgctcttaaaaaagaaagaggaatgcatg
aaaaagatcagagaattgggctcccttccgcaggaggcttttgaaaaataccagacgtta
acattaaaacagctattccgcaagctggagcaatgcaacacagagctaaagaagtacagc
cacgtcaacaagaaagctttggaccagtttgttaacttctctgagcagaaagagaagctc
attaaacgtcaggaagagctggaccgaggtcacaaatccatcatggagctaatgaatgtc
ctagagcttcgaaagtacgaggccatccagcttacttttaagcaggtatcgaagaacttc
agtgaagtgttccagaagctggtgccaggaggaaaagccacacttgtgatgaagaaaggg
gatgtagaggggagccagtctcaagatgaaggggaagggaacgcagacggtgaaaaaggc
tccagctcaaagaaaagtgtgccatctgttgatcagtttactggtgttggaatccgggtt
tccttcactggcaagcaagctgaaatgagagagatgcagcagctgtctggaggacagaag
tccctggtagccctggcgttgatttttgcaatccagaaatgtgaccctgcccctttttac
ctgtttgatgaaattgaccaggctctggatgcccagcacaggaaagctgtgtcagatatg
atcttagaattggcatcacatgctcagttcattaccacaaccttcaggcctgagctgtta
gaatctgctgacaagttttatggagtgaagtttagaaataaggtgagtcacattgacgta
atcacagcagaacaggccaaggactttgtggaagacgatacaactcacggttga
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integrated database retrieval system
