Rana temporaria (common frog): 120946922
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Entry
120946922 CDS
T07929
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120946922 (RNF38)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120946922 (RNF38)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120946922 (RNF38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
120946922
NCBI-ProteinID:
XP_040217683
LinkDB
All DBs
Position
1:342054860..342471113
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AA seq
572 aa
AA seq
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MNQQQQQALHGMPGVPHFHHQLQTPPPLPLHHHHHHHHHHLSAALRGPGVDNNPMEGARQ
PHSPPRRRGNSPTTSDYHHHHLLRSPAGHLGPTFQCQPVHQDHICNDDSEKNEDSPSPKR
QRLSNSVFDYTAPSPAPSPPMRPWEMTSNRRPPSARPIQHHFSGERCNTPARNRRSPPVR
RQRGRRDRLSRHNSVSQDENYHHISYGQQQTIEEPRAFHPPNVSPRMLHPAAHPQQQNTV
MVDIHEQIHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSAQQVPGCSVVFSGQHLPICSV
PPPMLQACSVQHLPVPYAAFPPLLSSDPFLLHPPHLSPHHHAHLPPPGQFVPFQAQQSRS
PLQRIENEVELLSEHLPVGGFTYPPPAHAPTLQASGPLQFITHDTLHQEVSFGVPYPPFM
PRRITGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPTVGPAFSFELDVEDGEVENYEAL
LNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNH
EFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacaacagcagcaggcgctgcacggcatgcccggggtgcctcactttcaccac
cagctccagacaccaccacctcttcctcttcaccatcaccaccatcatcatcaccaccac
ctttctgctgccctcagagggccaggcgtggacaacaaccccatggagggagccaggcaa
ccccacagtcctccaagaaggagagggaacagtccgaccaccagtgattaccatcatcac
cacctcctccgatctccagcaggtcatttgggccccacatttcagtgtcagccagtacat
caagaccacatatgcaatgatgacagcgaaaagaacgaagacagtcccagcccaaaaaga
cagcgattatcgaattctgtttttgattacactgcaccatctcctgcaccatcgccgcca
atgcgaccatgggagatgacgtcaaataggcggcctccttcggctcgacccattcaacac
cacttctcaggggaaagatgcaacactcctgctcgtaacagaaggagtcctccagttaga
aggcaaagaggaagaagggacaggctttcacgccataattctgttagccaagatgaaaat
tatcatcatatttcctatggccagcagcagactatagaggagcccagggcctttcaccct
ccgaatgtatctccccgcatgctacacccagctgcacacccacaacagcaaaataccgtt
atggttgacattcatgagcagattcaccagggtacagtaccggtttcttacactgttaca
actgtagcaccacatggaatccctctgtgtactgggcagcacatccctgcttgtagcgca
cagcaggttccaggctgttctgtggtctttagtggacagcacttacccatctgcagtgtg
cctcctccgatgcttcaagcatgttcagttcaacacttaccagttccctatgctgctttt
ccaccccttctttccagtgacccattcttattacatccaccacatctttccccacatcac
catgctcatctaccccctcctggacagtttgtacctttccaggcacagcagtctcgatcg
cctctgcaaaggatagagaatgaagttgagctgttgagtgagcatctacctgttggagga
tttacataccctccgcctgctcatgcaccaacattgcaggcctctggccctttacagttc
ataactcatgatactttgcaccaggaggtttcctttggagttccttatcctccctttatg
ccaagaagaattactggacgtagcagataccgatcacaacagccaataccaccgccacct
taccatccaagccttttaccttatgtcctttccatgcttccagtgcctcctaccgtagga
ccagcctttagctttgagttggatgtggaagatggggaagtggaaaactatgaggcattg
ctaaatctagctgaaaggctaggtgaagcaaaaccacggggattaacgaaagcggatatt
gagcaacttccgtcatacaggtttaacccaaacaatcaccagtcagagcagaccttatgt
gtagtgtgcatgtgtgattttgagtcaagacagcttctaagagtcttaccatgtaatcat
gaatttcacgccaagtgtgtcgacaaatggctaaaagcaaatcgtacctgcccaatatgt
cgagctgatgcttcagaagtacatcgtgattcagaatga
DBGET
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