Rana temporaria (common frog): 120946949
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Entry
120946949 CDS
T07929
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120946949 (BTAF1)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120946949 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_MROH2B_C
Vac14_Fab1_bd
HEAT_2
TPR_Trm732_C
HEAT_GCN1
HEAT_GCN1_C
HEAT_EZ
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
120946949
NCBI-ProteinID:
XP_040217741
LinkDB
All DBs
Position
8:complement(53517359..53616311)
Genome browser
AA seq
1846 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPITRKAAAQQLGEVIKLHPHELNNLLSKVLLYLRSPNWDTRI
AAGLAVEAVVKHVPAWNPSTRLKKEAGSECSSDESPLSDRLSFDRFDISRLLKHGASLLG
SAGVEFEVQDDKLVDVDPKERIARQRKLLQKKLGLDMGAALGMSTEELFNDEDLDYMPSN
TLVNKPTLQAAEFIDSEFLPGMSNRQKNKAKRMAKLIAKQRSRDVMEANEKSSDSTDGEP
EEKRRKVTNVVISQPATESKVLIDNVPDNSSLFDETNEWPLESFCEELCNDLFNPSWEVR
HGAGTGLREILKAHGKSGGKIADSTCEEMEQQHQEWLEDLAIRLLCVFALDRFGDFVSDE
VVAPVRETCAQTLGVVLKHMNESGVLNTVKILLRLLTQEQWEVRHGGLLGIKYSLAVRQD
LIKTLLPKALPAIIEGLQDLDDDVRAVAAASLVPVVDSLVKLQFKQVPFIISTLWDALLE
LDDLTASTNSIMTLLSSLLAYPQVQQCSVQQSLTILVPRVWPFLRHTISSVRRAALETLC
TLLYTQDQNCSGWLTPILQDMLRHIFQLCILESNQEILDLIHKLWQELITKANVQYVVAA
ACPWMGAWLCLMMQPAHLPIELNMLLEVKPKSKAGGKLRQGQGLTKEVTQEYIAGSDSVT
DDSATRDFVVTRARIAAARLLGSLCCCICDPVVNAPSQEIKPAESLAQLLLFHLNSKSAL
QRISVALVVCEWAALQKECRTVSLAVQPRLVAVLSEHLYYDEIAIPFTRMQNECKQLISS
LAEAQIDIQSRVNCSVFTIDQANDLVTTVFSDATAVLRGDPKAFQILDAKRQQVQMTVVE
TNQEWQVLQLRVHMFAACAIINLMQLPEKLNPIIKPLMESVKKEENTAVQNFAALCIAKL
LQQCISRTPCPNPKILKNLCSSVCVDFNITPSVSCPAPVINHTDNSKGSNSEKEGTCHTV
TKHRGIITLFRHQQAAFAITSRRGPAPKAVRSQVTELPAGSSSHGASDSDEAQKQQLFQR
RGAEFTLAKIAKHFATDLPTGLPHLWEAMVGPLKNYINVDHFDGKLLLEKGDDHAQELVN
SLQVFEITAASMNSKLHPLLLQHLPHLFTCLQHPYTAVRHMASRCVGVLSRIATMETMNV
FLEKVLPWLSAIDDSTKQEGAIEALACVMEQLEVGIVPYIVLLVVPVLGRMSDQTDSVRF
MATQCFATLVRLMPLEAGISDPPNMSSELIKLKARERNFLEQLLDGKKLENYSIPVPIKA
ELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCNRSKEYNRSKSTDC
MPLPSLVVCPPTLTGHWVDEVGKFCPKEYLHPLHYTGPPTERARLQHQVKRHNLIVASYD
VVRNDIDFFRNMKFNYCILDEGHVIKNGKTKLSKAVKQITANYRIILSGTPIQNNVLELW
SLFDFLMPGFLGTERQFAAKYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRM
KEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKTDVAETVAMTALSEESERPKLKA
TGHVFQALQYLRKLCNHPSLVLTVQHPEYKKITELLCTQNSSLRDIQHAPKLSALKQLLL
DCGLGNAGTSESGTETVVAQHRILIFCQLKSMLDIVEHDLLKSHLPSVTYLRLDGSIPAG
HRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIG
QKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENASLQSMGTDQLLDLFTLDKDG
KREKMETSEAGGKTSMKSILDNLGELWNQEQYDSEFSLDNFMHSLK
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccaggttggaccgcctcttcattttactggacacaggaacaacgccaatc
acacgaaaagcggcagcacagcagctcggtgaagtaataaagcttcacccacatgaactg
aataacctgttatctaaggtcttgctttatttgcgaagtccaaactgggatacacgtatt
gcagctggtctggcagtagaggccgttgtgaaacatgttcctgcgtggaatccatcaacc
aggctgaaaaaagaggctggttcagaatgctcaagtgatgagtctcctctctcagacaga
ctgagctttgacaggtttgacatatcaagattattaaaacacggtgcttccttgctgggc
tcagctggtgttgaatttgaagttcaagatgacaaattggtggacgtggaccctaaggaa
aggatagcacggcaaaggaagctgctgcagaagaagctaggccttgacatgggagctgcc
cttggaatgagtactgaagagctgtttaatgatgaagacctggactacatgccaagcaac
acgcttgtaaataaacctactctccaagcagcagagtttattgattccgaatttcttccg
ggcatgagtaacaggcagaaaaataaagcgaaacgaatggcaaagcttatagcaaagcag
agatctcgggatgtaatggaggccaatgaaaagagcagtgatagcacagatggggagcct
gaagagaagaggaggaaagtaaccaatgttgtcatcagtcagccagcaactgagtccaaa
gtattaatcgataatgttccagacaactcttccctgtttgatgagactaacgagtggccc
ctggagagcttttgtgaagagctctgtaatgatctatttaacccatcttgggaggttcga
catggcgcaggtactggtctccgagagattcttaaggcccatgggaaaagcgggggcaag
attgcagacagcacatgtgaagagatggagcaacaacatcaagagtggttggaggatctg
gctattcgtcttctttgtgtgtttgcattagaccgatttggagactttgtgtcagacgaa
gtggtcgcacctgttcgggaaacttgtgcccagacgttgggagtggtccttaaacacatg
aatgaaagtggagtgctgaatacagtgaaaatcctactacgcttattaacgcaagagcag
tgggaagtgcgacatgggggactgctaggaatcaagtattctctcgctgttcgccaggat
ctgattaaaactttattacccaaagcactaccggcaataattgaaggtctacaagacctt
gatgatgatgtgcgggcagtagcagctgcgtctttagtgcctgttgtagacagtttagtt
aaactacaatttaagcaggttccttttattattagcactttatgggatgcacttctggag
ttagatgacctcacagcttctaccaacagtatcatgaccctcctctcttccctacttgct
tatcctcaggttcagcagtgcagtgttcagcaatctcttacaatattggtgccacgagtg
tggcctttcctgcgtcatacgatctcttctgttcggagggcagctctagaaaccttatgc
actttgttatatacacaggaccagaactgttcaggttggctaacccccatcttgcaagac
atgctgcggcatatatttcagctctgtattctggagagcaaccaagaaattcttgatctt
atccataagttgtggcaagaactgattactaaagcaaatgtgcagtacgtagtggccgct
gcctgcccatggatgggagcatggctctgtttaatgatgcagccagctcatttgcctatt
gaattaaatatgctgctggaggtcaagcccaagtcaaaggcaggtggtaaattgcgtcaa
ggtcagggcctgacaaaagaagtcacccaggagtatattgctggctcagacagtgtcact
gatgactctgccactagagactttgtggttactcgagctcgtatagctgctgcaagactg
cttggatcgttgtgctgctgtatctgtgatcctgttgtaaatgcaccttctcaggagatc
aagcctgctgaatccctagcccagctactactcttccatcttaattccaagtctgcctta
cagaggataagtgtggctcttgtggtctgtgaatgggcagccttgcagaaggaatgcaga
acggtatcccttgcagtccagccacgtctggttgcagttctttcagagcatctgtattat
gatgaaatagcaatcccttttaccaggatgcagaatgagtgtaaacagttaatctcctcc
ctggctgaagctcaaattgacatccagagcagagtaaactgcagcgtattcaccatcgac
caagctaatgatctggtcactacagtgttcagtgacgcaacagcagttctgagaggggac
ccgaaggctttccagatcttggatgcaaaaagacagcaagttcaaatgactgtggtggaa
acaaaccaggaatggcaggtgctacagctgagagtacacatgtttgcagcttgtgccatc
atcaacctcatgcagctgcccgagaagctcaatcctataattaaaccattaatggaatct
gtgaaaaaggaagaaaacacagcggtgcaaaactttgcagccttgtgtattgctaaactc
ttacaacaatgcatctcaaggactccttgtccaaaccccaaaatattgaaaaatctttgc
agctctgtgtgtgtggatttcaatatcaccccttctgttagttgtccggccccagtcata
aaccacactgacaactcaaaaggatcgaattctgaaaaagaagggacttgccatacagtg
acgaagcacaggggcataattaccctcttcagacaccagcaagctgcttttgcaatcaca
agcaggcgaggtccagctcccaaagcagtgcgatcacaggtgacagagttgcctgcagga
agcagtagccatggggcttcagattctgatgaggctcagaaacaacaattatttcagcga
agaggtgcagaattcactctggctaagattgccaaacactttgccacagacttgcctact
ggattacctcatctctgggaagcaatggttggacctctgaagaactacataaacgttgac
cattttgacggaaagctcttgttagaaaaaggagacgatcatgcacaagagctggttaac
agcctccaagtgtttgaaattactgctgcttctatgaattccaagcttcaccctctgctg
cttcaacatcttcctcatctgttcacctgtctacaacatccgtacactgcagtgaggcac
atggcatctcgatgtgtaggagttttgagccgtattgctaccatggaaacaatgaatgtc
tttttggagaaagttttgccttggctcagtgccattgatgatagcacaaagcaggagggt
gcaattgaagctctggcctgtgtaatggaacagctggaggttggcattgttccatacatt
gtcctgcttgttgtgccggtattgggtagaatgagtgaccaaacggatagtgttcgcttt
atggcaacgcagtgttttgcaactctcgtcaggctgatgcccctagaggctggaatctca
gatccacccaatatgtcaagcgagctaattaaactaaaagccagagagcgcaacttcttg
gagcagctgctggatggaaagaaattggaaaattattcaatccctgttccaataaaagct
gagctcaggaaatatcagcaggatggagtcaattggttggccttcttgaacaagtataaa
ttacatggcatcctgtgtgatgatatgggacttgggaaaactctacagtctatatgtatt
ctagcaggggaccattgtaacagatctaaggagtataacagaagcaaatccacagactgc
atgcctcttccatctctggtggtgtgcccaccaacactgacgggccactgggtagatgaa
gtcgggaagttttgtcctaaagagtacctccacccattacattatactggtccacccaca
gagcgtgccaggttacagcaccaggttaaaagacacaaccttattgtggcttcttatgat
gttgtgagaaatgatattgacttcttcagaaatatgaaatttaattactgtatattggat
gaaggccatgtaattaaaaacggcaagacaaaattgtccaaagctgtgaagcagataacg
gcaaattacagaattatcctttctggaactccaatacagaacaatgttttggagctgtgg
tcattgtttgacttcctcatgcctggttttctaggcacagaaaggcaatttgctgctaaa
tatgggaagcctattttggctagcagggatgctcggagctcctctcgtgaacaggaagct
ggtgttcttgcgatggaggcattacaccgtcaggtgctaccatttttactgcgccgaatg
aaagaggatgtattgcaagatcttccgcctaaaattattcaagactattactgtactctg
agtccattacaggtacaattgtatgaagattttgcaaaatcccgtgccaagactgatgtt
gctgaaacagttgccatgactgctctttctgaagaaagtgagagaccaaagctaaaggct
actggacatgtcttccaggcattgcaatacttgcgtaagctatgcaaccatccttctttg
gtcctgacagtgcaacacccagagtacaagaagatcacagaactactttgtacgcagaat
tcttctctgcgggacattcagcatgcccccaagctatctgctttaaaacaactgctgttg
gattgcggtttgggtaatgctggcacctcagagagcggcacagaaacagttgtggcccag
cacagaatattaatcttttgtcagttgaagagcatgctggatatagtggaacatgacctc
ctgaagtctcacttaccgtctgttacatacctgcggctggatggaagtataccagcaggc
cacagacattccatagtgtcaaggttcaacaatgacccctcaatagatgttctgctgctg
accacgcatgtgggtggcttgggtctcaatttgactggggcggatacagtagtgtttgta
gaacatgattggaacccaatgagagatctccaggctatggacagagcacatcgtattgga
cagaaacgagtggttaatgtatatcggctaattacaagaggaactctggaggagaagatt
atgggtctgcagaagttcaagatgagcattgccaacaccgtgataagtcaggaaaatgcc
agcctgcagagtatgggcactgaccagctgcttgacctgttcactctggataaggatgga
aagcgtgagaagatggagacatctgaagccggcggaaagacttcaatgaaatcaatcctt
gacaaccttggagaactgtggaaccaggagcaatacgattcagaatttagcctggacaat
ttcatgcattctctcaaataa
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integrated database retrieval system
