Rana temporaria (common frog): 120947004
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Entry
120947004 CDS
T07929
Symbol
PDZD7
Name
(RefSeq) PDZ domain-containing protein 7
KO
K21882
PDZ domain-containing protein 7
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtem03037
]
120947004 (PDZD7)
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120947004 (PDZD7)
Cilium and associated proteins [BR:
rtem03037
]
Primary cilia and associated proteins
USH complex and associated proteins
120947004 (PDZD7)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
120947004 (PDZD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DMPK_coil
USH1C_N
Motif
Other DBs
NCBI-GeneID:
120947004
NCBI-ProteinID:
XP_040217841
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All DBs
Position
8:complement(62875093..62965550)
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AA seq
972 aa
AA seq
DB search
MAHAIEVDDNEMTQGEYPGSSRRDSSLRARHLFRRLNRPGNGHPKGLRATSPMGRVILIN
SPLEANSDESDSVLAITVDKTPDGKLGFSVRGGSEHGLGIFVSKVEEGSSADLAGLCVGD
KIAEVNGISLESITMGSAVKVLTGNNRLRMMVRRMGKVPGIKFSREKTTWVDVLRKRLVV
EKGSSTPSDSSSEDGMRRIIHLYTSSDDTCWGFNIRGGKEYGLGIFVSKVDPGGLAEERG
IKVGDQVLSANGINFEDISHSKAVEVLKGLTHIMLTIKEMGMYPAYKEMIAEYCWFNRLT
NGQLQQLSQASETSSSISSYCSGVPQGIVNGYHQALMSGSAMFEPAMVDVGISTEISLDP
HLLGTSETAMQTDLHSSSSVFSDSDEAQKLGMVSTKMQRTVHPPVLLKDTAIRSESMLES
PLKRRQRKQIGGDFPNSESPKTSLLLALSKPRKPIKRSQSYISLWEARKKKKKEKKSSPE
SITLQRSKTFLNLFFKGGRSKENGEGSKESSTPDSKRRARSPSPGESEKVNIVQKFMIRS
LKKGKERSRPFFFGAQRELKAIYNGDLSIEDKLAETEDMARKLLNEDEVAAILRHCRRYI
HEGGIEDLVRPLLAILDRPEKLLLLRDIRGLIALTDLGRFDSMVISLEMEAYDALKNRSV
ASPALRPARYDTLPRKHLVTPVPDHRGAFQLKPVDDVNDSKSLPGEMERLQVSDPNDVKP
TYPKNFTPLEDVPVDSFDAQNTTVKKSSSRPQRPNWLLTEPIKRSSMLNDGASLGTSDNK
SLPTRSKKDQQANSEDSRVPRTTRSRSKEKKNEAYSVISKAKKSRPILSQIFGGVSLNPS
NFDIKLRPIRSDSNHLEPERVSQNGFRDDKEEEYEMLTVTISKTKQSLGISISGGIESKI
QPMVKIEKIFPGGAAFLSGELQAGYELVSVDGETVQNVTHQRAVDVIRQSYSNKQKEPME
LVVKIPKKSEKQ
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgctattgaagtggatgacaatgagatgacccaaggtgaatatcctgggagc
tccaggagagactcttcacttagggcccgacatctattccgtaggctgaacagacccgga
aatggacaccccaaagggctgagagctacttctccgatgggaagggtcatcttgataaat
tcaccattagaagccaacagtgatgagagtgattcagtccttgccatcacagttgacaaa
actccagatggtaaattggggttcagcgtccgagggggttcagagcatggccttgggatc
tttgtcagtaaagtggaagaaggaagcagtgcagatctagcaggtctgtgtgtcggagat
aagatcgccgaggtgaacggtatcagtttagagagtataactatgggaagtgcagtcaaa
gtactcactgggaacaaccgtctacgtatgatggtgagacggatgggaaaagtgccaggg
attaagttctccagagaaaagaccacatgggttgatgtgcttcgtaagagactagtagta
gagaaaggaagctcaacaccatcagacagcagctccgaagatggaatgagaaggatcatt
cacctctatacatcatcggatgacacttgttggggatttaacatccgaggagggaaggaa
tatggactgggaatctttgtttccaaggttgacccgggtggattagcagaagaaaggggc
attaaagttggtgatcaagttctttcagccaatggaatcaactttgaagatataagccat
agcaaggcagtcgaagtgctaaaggggttaactcacatcatgctcacaatcaaggagatg
ggaatgtaccctgcgtacaaagagatgattgcagaatattgttggtttaatcgattaacc
aatggccaattgcagcagctctcccaagcttctgaaaccagctcttctatttcttcctat
tgctctggtgtccctcaaggaattgttaatggttatcaccaagcacttatgtctggctct
gccatgtttgaaccagcaatggttgatgttggaatctctacagaaatatcacttgaccca
cacttgttgggcacttcggaaactgccatgcagacagatctgcattcgtcttcttctgta
ttctctgattctgatgaagctcagaaactggggatggtgagcactaaaatgcagagaact
gtccacccacctgtccttcttaaagatactgccatacgttctgagagcatgttagagtcc
ccgctgaagaggagacagaggaaacaaattggaggggattttcctaattctgaatctcca
aaaacgtcattgttgttggcacttagcaaacctcggaaacccatcaaaagatctcagagc
tacatttctctttgggaagcccgaaaaaaaaagaaaaaagaaaagaagagttcccccgag
agtattacgttacagcgttcaaaaaccttcctaaacctgttttttaaaggcgggcgctca
aaagaaaatggagagggcagcaaggagtcctccacacctgattcaaaaagaagagcaagg
tcgccgtcaccaggtgaatcagaaaaagttaacattgttcagaaatttatgatcagaagc
ctgaaaaagggcaaagaacgtagtcggccattcttctttggggctcaaagggagctgaaa
gcaatctataatggagacctgtctatagaggacaagctggcagaaaccgaggacatggcc
agaaaactgctcaatgaggatgaagtagcagccatcttgcgtcactgtagaaggtatatc
catgaagggggtattgaagatttggtaagaccattgctcgccattctggatcgccctgag
aagcttctacttttacgagatattagagggttgattgcactcacagacctcgggaggttt
gatagtatggttatttccctggagatggaagcatacgatgccctcaagaacagatcagtg
gcatctcctgcacttagacctgccagatatgacacacttccgaggaagcatcttgttact
ccggttccagatcatagaggagcttttcaacttaaaccagtagatgatgtgaacgacagc
aagtcgcttcctggggaaatggagaggctacaagtctcagatccaaatgatgtcaaacca
acatatcctaaaaactttaccccacttgaagatgtgccagtcgattcctttgatgcccaa
aatactacagtgaagaagtcttcctctcggccacaacggccaaactggctccttactgaa
cccataaagaggtcctccatgctcaatgatggcgcctcattgggaaccagtgacaacaaa
tctttgcctacaagaagtaaaaaggaccaacaagctaatagtgaggattctcgagtgcct
agaactactcgcagtagatctaaagaaaaaaagaatgaggcttattcagtcataagcaag
gctaagaaatccaggccaatcttgtctcagatcttcggaggggtctctctgaatccatcc
aactttgacatcaagctaaggcctatacgatcagacagcaatcacctagaaccggagcgg
gtttcacagaatggctttagagatgacaaagaggaggagtatgagatgctgactgtgaca
atctcaaaaaccaaacagtctttaggaatcagcatatctggaggaattgaatccaaaata
caaccaatggtgaaaattgaaaagatctttcccggaggagcagcctttcttagcggcgaa
ctccaggccggctatgagcttgtctctgtggacggggaaaccgtgcagaacgtaacacac
cagcgggcagtggacgtcattcgtcagtcctacagcaacaaacagaaggagccaatggag
cttgttgttaaaattccaaagaaaagcgagaaacaataa
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