Rana temporaria (common frog): 120947133
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Entry
120947133 CDS
T07929
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120947133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtem02000
]
120947133
Transporters [BR:
rtem02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120947133
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
Rad17
SbcC_Walker_B
AAA_21
AAA_28
AAA_7
AAA_30
AAA_29
G-alpha
DUF815
CPP1-like
CDC45
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
120947133
NCBI-ProteinID:
XP_040218088
LinkDB
All DBs
Position
8:complement(87921971..88017091)
Genome browser
AA seq
1341 aa
AA seq
DB search
MRDTSEMPKKDKHIVDGFPDHVYDNPTFQQDEKAASNGIIKQETDNFMFVNSGKKGKKHG
PVQKRMVGSLELLVYADKWDILLMILGLASALGAGTGLPIMIIVFGDMTDSFVQSGISQN
LTALNITPPPPGVCNQKIVGGVDIEAKMTTYAYYYVAIGCGMFVLTFFEIWAFVISAARQ
SHRIRQKFFKAVLHQEMSWFDTTQIGTLNTRLTDDINTIHDGLGDKISIFIQFFSTFLTG
IIIGFIYGWKLTLVIMSVSPLLGVSAALWSKLLATFTIKELASYSQAGAVAEEVLTAIRT
VVAFNGQEKALTKYDANLQEAKRIGIKKSVTTNVSMGLTQFLIFGAYALAFWYGTKLTVD
EPENYTIGTVLIVFFSVLIGTFSLGQAAPNLESISNARGAAYEVYSIIDKHRPIDSSSNE
GHKPEKLTGNIEFKNIHFSYPTRPDTQILKSLNLKVKAGQTVALVGASGCGKSTTIQLLQ
RFYDPLIGEVTVDGHDIRTLNVKWLRENIGVVSQEPVLFGTTIKENIRYGREDVTDAEII
QATKEANAYDFISKLPDGLDTMVGERGAQLSGGQKQRIAIARALARNPRILLLDEATSAL
DTQSERIVQNALDKARAGRTTIVIAHRLSTIRTADVIAGFHNGVVVEQGSHEDLMNKQGV
YYSLVMLQSYDKIKEDEVNSETEEEDEEDEGQIFEYEDINEDDADVAPDSPNHGNLEIMN
SDNLHRHSSRRKSRRSTKRKSKSKKNAPKQEEVVEDLPDFSLGKMLALNKPEYCYIAMGV
IAAAISGGIYPTFAIIFGKVIGSFSITDPDERSQRTILLSLMFLVLGVISLIVYVIMGFS
FGISGENLTLRLRSLSFKALLRQEIGYFDDHANAVGVLLTRLATDASQVKGMTGGRLGLL
TISVCTLLTAIIIAFVYGWQLTLLILACIPFLIGSNFIRMKAMTGHATKDQKALEDAGRI
STECVENIRTVVSLTREEAFFNLYNLSLTGPYKDSIKKAHIHGLTYALSQSINFFVNAAV
FRFGAWLIANCHTQFENVFIVFSTIIFAAMNVGQTSSLAPDMGKAKVSSQRIMKLLDRQP
AIDSYSEDGEKLSAYEGNLEFKDIKFVYPTRPKVQVLQGLNVKVTKGQTLALVGSSGCGK
STSVQLLERFYDPVDGKVLADGIDTKTLNLKWLRSQMGIVSQEPMLFDCSIAENIQYGAL
DREVTQEEIVEAAKAANIHTFIENLPDKYNTRVGDKGAQLSGGQKQRIAIARALIRKPKV
LLLDEATSALDTESEKVVQKALDDARQGRTCVVIAHRLTTVQNADIIAVIQNGRVIEQGT
HPQLLARQGAYYALVNSQVTN
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgagagacacaagtgaaatgccgaagaaagacaaacacatcgttgatggctttcccgat
catgtttatgacaaccctacctttcaacaagatgaaaaggcagcaagtaatgggataata
aagcaggagacggacaattttatgtttgtcaacagtgggaagaaaggaaagaaacatggt
ccagttcaaaaaaggatggtgggctctttagagctgcttgtctatgctgataaatgggat
atactgctgatgatccttggattagcgagtgcacttggcgcaggcactggacttcccatc
atgatcatagtctttggggatatgacagattcttttgttcagagcggtattagccagaac
cttacagcgttgaacatcaccccccctccacctggagtatgcaatcagaagatcgtaggc
ggtgttgatatagaagcaaaaatgacaacatatgcatattattatgttgccattggctgt
ggtatgttcgtacttaccttttttgaaatttgggcatttgtaatatcagccgcaagacag
tctcataggatacgacaaaagttcttcaaagctgtgcttcatcaagaaatgtcttggttt
gacacaacccagattgggacactcaacaccagattgactgacgatattaacactatacac
gatggactcggagacaaaatttctatatttatccaattcttttcaacttttctaactgga
ataatcattggatttatatatggctggaaactgacactggtaatcatgtcagtgagccct
ctgctcggtgtatctgcagcactgtggtccaaattacttgctaccttcacaataaaagaa
ctggcatcttattctcaagctggagcagtagcagaggaggtccttactgcaatccggaca
gttgtggcttttaatgggcaagaaaaggctttgactaagtatgatgccaacttgcaagag
gcaaaaagaattggcattaaaaagtctgttacaacaaatgtatccatggggcttactcag
tttctaattttcggagcttacgccctagctttctggtatggaaccaaattaacagtagat
gaacctgaaaactacaccattggaacagtgttaattgtgtttttctctgtgctcattggg
actttttcccttggtcaagccgcaccaaatctagagagcatatctaatgcacgtggggct
gcctatgaagtgtacagcatcattgataagcacaggccaatagacagcagttcaaatgaa
ggccacaagccagaaaagctgacaggaaatattgaatttaagaacatccatttttcctac
ccaaccagaccagatacacaaattttaaagagcttgaaccttaaagtaaaagctggacag
actgttgccctagttggggccagcggctgtggaaaaagcaccacgattcagcttcttcaa
agattctatgaccctcttataggggaggtgactgtggatggacatgacatacgcaccctc
aatgtgaagtggctacgtgaaaacattggagttgttagccaagagcctgttttgtttggt
acgacaatcaaagaaaatatccgctatggaagagaagatgtcactgatgctgagatcata
caagctactaaagaagccaatgcctatgattttatatctaaactcccagatggtttggac
accatggtgggtgagaggggagctcagctgagtggaggacagaagcagagaatagctatt
gcccgagctcttgcacgtaaccccagaattctgctgcttgatgaagccacgtcggctctg
gacacacaaagtgaaagaattgtacagaacgctctagacaaggctagagcaggccgtacc
acaattgtgatagcacaccgcctgtctacgatccgtacagctgatgtcattgctggcttt
cacaatggtgttgtagtggaacaaggatcacatgaggatctcatgaataagcaaggagtc
tactattctcttgtaatgttgcagagttatgacaaaataaaagaagatgaggttaatagt
gaaacagaggaagaagatgaggaagatgaagggcaaatttttgaatatgaggatatcaat
gaggacgacgccgatgttgctcccgattctccaaaccatggcaacctggagatcatgaac
agcgataacttacatagacattccagcaggagaaaaagtagaaggtctacaaaaaggaaa
tccaagtccaaaaaaaatgcacccaaacaagaagaggttgttgaggatcttcccgatttc
tctctaggcaaaatgcttgcactaaacaaaccggaatattgttatattgccatgggagtt
atcgcagcagctatttctggtggtatatatccaacctttgctatcatttttggtaaagtt
attgggtcattcagtattactgatccggatgaaagaagtcaaagaacaattttactgtct
ctaatgttccttgtgctgggggtgatcagtctaattgtttatgtcatcatgggtttctct
tttggaatatctggagaaaatttgaccctaagattaaggtcattatcttttaaggcacta
ctccgacaggaaatcgggtactttgatgatcatgctaatgcagttggagttttgctaacc
agacttgcaacagatgcttctcaagtgaaagggatgacgggcggtcggttgggtttgctt
accatttcggtttgcactcttcttacggcaatcataattgcatttgtttatggctggcag
ctgacattgcttattttggcctgtataccattcttgattggttcaaattttattaggatg
aaggcaatgactggccatgcaacaaaggatcaaaaagctttagaggatgctggaagaatc
tcaacagaatgtgttgaaaatataagaactgtggtatctttgacaagagaagaagcattt
ttcaatctatacaatttaagcttaactggtccctacaaggattctataaaaaaagctcac
attcatggcttaacctatgcactttcccagtccataaacttctttgtcaatgcagctgta
ttccgatttggagcttggctgatcgcaaactgccacacacaatttgagaatgtcttcata
gtattctccacaattatttttgctgccatgaatgttggacagacgtcatcgctagcacct
gacatgggaaaagccaaagtatcatcccagagaatcatgaagcttctggacagacaacct
gcaattgacagttacagtgaagatggtgaaaaactgagtgcatatgaaggaaaccttgaa
ttcaaagatatcaagtttgtgtacccaacaagaccaaaagtccaggttcttcagggattg
aatgttaaagttaccaaaggacaaaccctagctctggtgggcagcagtgggtgtggaaag
agtacatctgttcagctactggagaggttctatgatcctgttgatggaaaagtgcttgcg
gatggaatagacacaaaaactttgaatctaaagtggctgagatcccaaatgggaattgtg
tctcaggagccaatgctgtttgactgcagcatcgctgaaaatattcagtatggtgctctg
gacagagaagtgacgcaagaagaaattgtagaagctgcaaaggctgcaaatattcatact
ttcattgaaaatcttccagataaatacaacacacgtgtgggtgataaaggtgctcaactc
tcaggaggacagaagcagagaattgccattgcccgagccttaatacgaaaacccaaagtt
ctgctgctggatgaggcaacgtccgctcttgacacagaaagtgaaaaggttgtgcagaag
gctctggatgatgccagacaaggcaggacatgtgtggtgattgcacatcgactcacgaca
gtacagaacgctgacatcattgcagtcattcagaacgggagagtcattgagcaagggacg
cacccccagctgctggctagacaaggagcatattatgctcttgtaaattcccaagtaact
aactga
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