Rothia terrae: IDM49_02880
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Entry
IDM49_02880 CDS
T06818
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rter
Rothia terrae
Pathway
rter03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rter00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IDM49_02880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rter03019
]
IDM49_02880
03009 Ribosome biogenesis [BR:
rter03009
]
IDM49_02880
Enzymes [BR:
rter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IDM49_02880
Messenger RNA biogenesis [BR:
rter03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IDM49_02880
Ribosome biogenesis [BR:
rter03009
]
Prokaryotic type
rRNA helicases
IDM49_02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
UvrA_inter
Cas3-like_C_2
AAA_22
Rep_fac-A_C
Motif
Other DBs
NCBI-ProteinID:
QNV38239
UniProt:
A0A7H2BEZ3
LinkDB
All DBs
Position
610813..612906
Genome browser
AA seq
697 aa
AA seq
DB search
MGHTPCSTAKTGCITPLEKRIMTENNSVNLTTEFVEPTLEDAQADTVKPEATEEEGIRFT
DLGLDARVQAAIDAVGYEKPSPIQAETIPLLLEGRDVVGLAQTGTGKTAAFALPALSRLA
ELADINGVSKDTQVLVLAPTRELALQVAEAFGSYANQMEDFTVLPVYGGSPYGPQLAGLK
RGAQVVVGTPGRVIDHLKKGSLDLSNLQYLVLDEADEMLRMGFAEDVEQILADTPDSKQV
ALFSATMPKTIRKIAERYLTDPVEVRVKSKTTTSANIKQRYMQVMHSHKLEAMTRVLEVE
DYDGIIVFVRTKKETEELADKLKARGYQAAAINGDIPQNLRERTVDSLRDGRIDILVATD
VAARGLDVERISLVVNFDIPHDTESYVHRIGRTGRAGREGAAILFMTPREKYMLRQIEKA
TRQQVEQMHMPSVEDVNENRKTRFAQQITDTIETEDLSIFREIVDSYVNEHDVEPEEVAA
ALAVIAQQGRPFFVEELPEIRDRRDRGDRDRGGRDGDRRGRKQHNDEGMVSYKLNVGRSS
GANPGGIVGALTNEGGIEGSQIGSIDIRQHFTIVGLPEDLPRDFFDRLENTKVAGQFINI
QRDRGPKGGGRGGRGGRDFGGERRGGGFRKNRGDRDFGGRGDRGGFRGDRDRNDRGGRDG
GFRKDRGGFRGDRDRNDRGGRDFGSERRGGFKGRKKY
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggggcacacaccgtgcagtacagccaaaaccggctgtatcaccccactcgagaagaga
ataatgactgaaaataactctgttaacctgaccaccgaattcgtagagcccactctcgaa
gacgcccaggctgacaccgttaagcccgaagctactgaagaagagggcattcgattcacc
gatctcggtttggacgctcgtgtgcaggcagcaattgacgctgtcggctacgaaaagcct
tcaccgattcaggctgaaaccattccgttgctgctagaaggccgcgatgttgttggtctg
gctcagaccggtaccggtaagaccgcagcatttgctttgcccgctctgtcacgtttggct
gagcttgcagacatcaacggtgtttctaaagacactcaggtgcttgttcttgcacctacc
cgtgagctcgcacttcaggttgctgaagctttcggttcttacgctaaccagatggaagac
ttcactgttcttcccgtttacggtggctcaccctacggtccgcagcttgcaggcctgaag
cgcggtgcacaggtagtcgttggtactcccggccgtgttattgaccacctcaagaagggt
tcattggacctttcaaacctgcagtacctcgtgctcgatgaggctgacgagatgctgcgc
atgggctttgctgaagatgttgagcagattcttgctgacaccccggattccaagcaggtt
gctttgttctcagcaaccatgcctaagactatccgcaagattgcagagcggtacctgacc
gatcctgttgaggttcgtgttaagtccaagaccaccaccagcgctaacatcaagcagcgc
tacatgcaggttatgcactctcacaagcttgaggcaatgacccgcgtccttgaggtggag
gactacgacggcatcattgtctttgtgcgcaccaagaaggaaaccgaagagcttgctgac
aagctgaaagctcgcggttaccaggcggcagcaattaacggcgatattccgcagaacctg
cgtgaacgcactgttgactccctgcgcgatggtcgcatcgatattctggtggcaaccgac
gttgctgctcgcggtcttgacgttgagcgcatctcactggttgtgaacttcgatattcct
cacgacaccgagtcatacgtgcaccgtattggccgtaccggccgtgcaggacgtgaaggt
gcagcaatcctcttcatgactccgcgtgagaagtacatgctgcgtcagattgagaaggct
actcgtcagcaggttgagcagatgcacatgccttctgttgaggatgtcaatgagaaccgt
aagactcgttttgctcagcagattactgacaccatcgagaccgaagatctttcaatcttc
cgcgaaatcgttgattcttacgtcaatgagcacgatgttgaacccgaggaagttgcagct
gctttggctgtcattgctcagcagggccgtcccttcttcgtcgaagagttgcccgagatt
cgtgaccgccgcgaccgtggcgatcgtgaccgcggtggacgcgatggtgaccgtcgcgga
cgcaagcagcacaatgacgagggtatggtttcatacaagctcaacgttggtcgttcatcg
ggtgctaaccccggtggcatcgttggtgcgctgactaatgaaggtggcatcgagggctca
cagattggctccatcgatatccgccagcacttcaccattgttggtctgcccgaagacctt
ccccgcgatttcttcgatcgcttggaaaacaccaaggttgctggccagttcatcaacatt
cagcgcgatcgcggtcctaagggtggcggacgcggcggtcgtggtggacgcgatttcggc
ggtgagcgtcgtggtggtggcttccgcaagaatcgcggcgaccgtgattttggtggacgt
ggtgaccgcggtggtttccgtggcgaccgtgaccgtaatgaccgtggtggacgcgacggt
ggcttccgtaaggatcgcggtggtttccgtggcgaccgtgaccgtaatgatcgcggcgga
cgcgacttcggaagcgagcgtcgtggtggtttcaagggtcgtaagaagtactaa
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