Rothia terrae: IDM49_03185
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Entry
IDM49_03185 CDS
T06818
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rter
Rothia terrae
Pathway
rter03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rter00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IDM49_03185 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rter03021
]
IDM49_03185 (rpoB)
03400 DNA repair and recombination proteins [BR:
rter03400
]
IDM49_03185 (rpoB)
Enzymes [BR:
rter01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IDM49_03185 (rpoB)
Transcription machinery [BR:
rter03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IDM49_03185 (rpoB)
DNA repair and recombination proteins [BR:
rter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IDM49_03185 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QNV38291
UniProt:
A0A7H2BF45
LinkDB
All DBs
Position
677372..680869
Genome browser
AA seq
1165 aa
AA seq
DB search
MVASSTSNNQTASGGAPSRISFAKISEPLQVPNLLSLQTDSFDRLVGNERWEARVEAAKE
TGDNSVAQISGLAEIFEEISPIEDFQGTMSLSFSDPEFADPKYTMEESKDRDATYSAPLY
VKAEFMNNNTGEIKQQTVFMGDFPLMTESGTFVINGTERVVVSQLVRSPGAYFEKSADRT
SDKDIYSAKIIPSRGAWFELEIDKRDQVGVRLDRKRKQSVTVLLKALGWTEAKILSEFGE
FDSIRATLEKDSVETREEALLDIYRKLRPGEPPTVDAAQALLDNMYFTPKRYDLAKVGRY
KVNRKLGIDTPLNDPSAMVLTQDDIAAMIRYLVTLHAGGSSIKGIRDGEETDIRVDIDDI
DHFGNRRIRAVGELIENQIRTGLSRMERVVRERMTTQDAEAITPQSLINIRPVVASIKEF
FGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPE
GPNIGLIGSLATYGRINPFGFIETPYRIVRDGQVTNEVKYLTADDEKGAIIAQANAPLDD
DFRFSEDQVLCRAGDGSGEAVLVENAEVQYMDVSPRQMVSVATALIPYLEHDDANRALMG
ANMQRQAVPLLQSEAPLVGTGMEKYAALDSGDSVLAKKAGVVSEVSADLVVVRNDDGTTS
SYPIMKFSRSNPGNCYNNRVVVREGDRVEARGLIADGPSTDNGELALGKNLLVAYMSWEG
FNFEDGIILSQRMVSDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEDVLSALDERG
IIHIGAEVEAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGESGTVI
GVRIFDRDDDDEDLPAGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFM
EDGTPVDIILNPMGVPGRMNIGQVLEVHTGWLAKQGWKIEGNPAWLDRMPNFPKESGPTT
VATPVFDGAYEDELFDLLDHTNPNRDGERLINRTGKARLIDGRSGEPFPEPISVGYQYIL
KLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTI
KSDDVHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSTDGQTIEMRDVE
DEGYRSADALGIDLSHAEPNSVEEV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcctcgagcacctctaataaccaaaccgctagcggcggtgcacccagccgcatt
tcatttgcaaaaatttccgaaccccttcaggttcccaatctgctctcactgcagactgac
agcttcgaccgccttgtaggcaacgaacgctgggaagctcgcgtagaagcagcaaaggaa
accggcgacaactcagttgctcagatttcaggtcttgctgaaatcttcgaagaaatctcc
ccgatcgaagacttccagggcaccatgtccctgtcattctccgatcctgaattcgctgac
cccaagtacaccatggaagagtcaaaggatcgcgacgcgacctactcggctccgctgtac
gtcaaggccgaattcatgaacaacaacaccggcgaaatcaagcagcagaccgtgttcatg
ggcgacttcccgctcatgaccgagtcaggtaccttcgtcattaacggtaccgagcgcgtc
gttgtttcacagctggtacgttcacccggtgcttactttgaaaagtcagccgatcgtacc
tcagataaggacatctacagcgcgaagattatcccttcacgcggtgcatggttcgaactt
gaaatcgataagcgcgatcaggttggcgttcgccttgaccgtaagcgtaagcagtcagtg
actgttttgctgaaggcacttggctggaccgaagctaagattctgagcgaattcggtgag
ttcgactccatccgtgcaaccctcgaaaaggactctgttgagacccgcgaagaggctctg
ctcgatatctaccgtaagttgcgtccgggcgagcccccgacggtggatgctgctcaggct
ctgctcgataacatgtacttcacccccaagcgttacgacctcgcgaaggttggccgctac
aaggtgaaccgcaagctcggtatcgacactcctttgaacgatcccagcgcaatggttctc
acccaggacgacatcgcagcgatgattcgttacctggtaaccctgcacgctggtggctca
tccatcaagggcatccgcgatggcgaagagaccgacatccgcgttgatatcgacgatatc
gaccacttcggtaaccgtcgcatccgcgctgttggtgaattgattgaaaaccagattcgc
accggtttgtcccgcatggagcgcgttgtacgcgagcgtatgaccacccaggacgccgag
gcaatcactcctcagtcactgatcaacatccgcccggttgttgcatccatcaaggagttc
ttcggtacctcacagctgtcacagttcatggaccagaacaacccgctggcaggtctgacc
cacaagcgtcgtttgtcagcgcttggccccggtggtctatcacgtgaccgggcaggcatg
gaagttcgagacgttcacccgtctcactacggtcgtatgtgccccattgaaacccctgaa
ggcccgaacattggtctgattggttcattggctacctacggtcgcatcaaccccttcggc
ttcatcgaaaccccttaccgcatcgttcgcgacggtcaggtcaccaacgaggttaagtac
ctcaccgctgatgacgaaaagggcgctattattgcgcaggcaaacgcacctttggacgat
gatttccgctttagcgaagatcaggttctgtgccgtgcaggcgatggttctggcgaagct
gttctggttgagaacgcagaggttcagtacatggacgtctcacctcgccagatggtgtct
gtagcaaccgcgttgattccttacctggaacacgacgacgctaaccgagcactgatgggt
gctaacatgcagcgtcaggctgtgccgttgcttcagtcagaagctccgcttgttggtacc
ggcatggagaagtacgcagcactggattcaggcgactctgttcttgctaagaaggcaggc
gttgtctccgaggtttcagctgacctcgttgtagttcgcaacgacgacggcaccacttct
tcatacccgattatgaagttctcacgctccaaccccggtaactgctacaacaaccgtgtt
gttgtacgcgaaggtgaccgcgttgaagctcgtggcctcattgcagatggcccttcaacc
gacaacggtgagcttgcactcggtaagaacctgctcgtggcatacatgtcatgggaaggc
ttcaacttcgaggacggcatcatcctgtcccagcgcatggtttcagacgacgttctgact
tcaatccacattgaagagcacgagattgacgctcgcgataccaagctgggtgcagaagaa
atcacccgcgacatccccaacgtatccgaggacgttctgtcagcgcttgatgagcgcggc
atcatccacatcggtgctgaggttgaagcaggcgatatcctcgtcggtaaggtaaccccc
aagggtgaaactgaattgactcctgaggagcgtttgctccgcgcaatcttcggtgagaag
tcacgcgaagttcgagatacttctttgaaggttcctcacggtgagtcaggtaccgttatc
ggcgttcgtattttcgaccgcgacgacgatgacgaagatttgcccgcaggcgtgaaccag
ctcgtacgcgtgtacgtagctcagaagcgtaagattaccgacggcgacaagcttgcaggc
cgccacggtaacaagggtgttatctcaaagattcttcccatcgaagatatgcccttcatg
gaagacggtactcccgttgacatcatcctgaaccccatgggtgttcccggccgtatgaac
atcggtcaggttcttgaggttcacaccggttggttggctaagcagggctggaagattgaa
ggcaaccccgcatggctcgaccgcatgccgaacttccccaaggaatcaggccccaccacc
gttgcaacccccgtgttcgacggtgcgtacgaagacgagctgttcgacctgctcgatcac
accaaccccaaccgcgacggtgagcgtttgatcaaccgtaccggtaaggcacgtttgatt
gacggtcgctcaggtgagcctttccccgagccgatttctgtgggttaccagtacatcttg
aagctgcaccacttggtggacgacaagattcacgcacgctcaaccggtccttactcaatg
attacccagcagcccctgggtggtaaggctcagttcggcggtcagcgctttggtgagatg
gaagtttgggcgctcgaagcatacggcgccgcttacaccctgcaggaaatcctgacgatt
aagtctgacgatgttcacggtcgcgtgaaggtctacgaggcaatcgttaagggcgagaac
atccccgagccgggcgtccccgagtccttcaaggttctcatcaaggaaatgcagtcactg
tgcctgaacgttgaagttctttcaaccgacggccagaccattgaaatgcgcgatgttgag
gatgaaggctaccgatcagcggatgcactgggcatcgacctgtcacacgcagagccgaac
tcagtagaagaggtctaa
DBGET
integrated database retrieval system
